BLASTX nr result

ID: Coptis21_contig00011476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011476
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like i...   454   e-125
ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like i...   450   e-124
ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002516814.1| structural constituent of ribosome, putative...   446   e-123
ref|XP_004144960.1| PREDICTED: calcium-binding protein 39-like [...   441   e-121

>ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like isoform 1 [Vitis
           vinifera] gi|297736958|emb|CBI26159.3| unnamed protein
           product [Vitis vinifera]
          Length = 345

 Score =  454 bits (1169), Expect = e-125
 Identities = 229/323 (70%), Positives = 257/323 (79%)
 Frame = +3

Query: 6   MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXXNFLSMRQLLSGD 185
           MSFSFFKASR K P ELVKAI+DSL+ALD+KT                NF++M+ +LSGD
Sbjct: 1   MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEVKALEKALEEVEKNFVTMKFMLSGD 60

Query: 186 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 365
           GE EPN+E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 61  GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 120

Query: 366 EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 545
           EYI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F +LAKYIL+STSFELFFK+VELPN
Sbjct: 121 EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRFQTLAKYILESTSFELFFKFVELPN 180

Query: 546 FDVASDAFATFKDLLTRHETAASEFLTARXXXXXXXXXXXXTSANYVTRRQXXXXXXXXX 725
           FDVASDAF TFKDLLT+H  A + FLTA             TS NYVTRRQ         
Sbjct: 181 FDVASDAFLTFKDLLTKHGNAVAVFLTAHYDEFFDQYEKLLTSPNYVTRRQSLKLLSEFL 240

Query: 726 XXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 905
              PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFK+FVANPNKP+EI VILAK
Sbjct: 241 LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKIFVANPNKPREIKVILAK 300

Query: 906 NHEKLLALLHNLSVGKGAEDEQF 974
           NHE+LLALL +LS GKGA+D+QF
Sbjct: 301 NHERLLALLQSLSGGKGADDDQF 323


>ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like isoform 2 [Vitis
           vinifera]
          Length = 339

 Score =  450 bits (1158), Expect = e-124
 Identities = 229/323 (70%), Positives = 257/323 (79%)
 Frame = +3

Query: 6   MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXXNFLSMRQLLSGD 185
           MSFSFFKASR K P ELVKAI+DSL+ALD+KT                NF++M+ +LSGD
Sbjct: 1   MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEALEEVEK------NFVTMKFMLSGD 54

Query: 186 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 365
           GE EPN+E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 55  GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 114

Query: 366 EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 545
           EYI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F +LAKYIL+STSFELFFK+VELPN
Sbjct: 115 EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRFQTLAKYILESTSFELFFKFVELPN 174

Query: 546 FDVASDAFATFKDLLTRHETAASEFLTARXXXXXXXXXXXXTSANYVTRRQXXXXXXXXX 725
           FDVASDAF TFKDLLT+H  A + FLTA             TS NYVTRRQ         
Sbjct: 175 FDVASDAFLTFKDLLTKHGNAVAVFLTAHYDEFFDQYEKLLTSPNYVTRRQSLKLLSEFL 234

Query: 726 XXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 905
              PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFK+FVANPNKP+EI VILAK
Sbjct: 235 LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKIFVANPNKPREIKVILAK 294

Query: 906 NHEKLLALLHNLSVGKGAEDEQF 974
           NHE+LLALL +LS GKGA+D+QF
Sbjct: 295 NHERLLALLQSLSGGKGADDDQF 317


>ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|222864577|gb|EEF01708.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  449 bits (1156), Expect = e-124
 Identities = 228/323 (70%), Positives = 252/323 (78%)
 Frame = +3

Query: 6   MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXXNFLSMRQLLSGD 185
           MSFSFFKASR K P E+VKA++DSLVALDTKT                NF+SMR +L GD
Sbjct: 1   MSFSFFKASRPKTPQEVVKAMKDSLVALDTKTVVEVKALEKALEEVEKNFVSMRCMLCGD 60

Query: 186 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 365
           GEVE N + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWSILLKQ V S YC V
Sbjct: 61  GEVESNTDQVSQLALEVCKEDVLALMIHKLPNLGWEARKDLVHCWSILLKQKVDSRYCSV 120

Query: 366 EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 545
           EYI+NH E LDFLVVCYDNK++ALNCG MLRECIKFP+LAKYIL+S SFELFFK+VELPN
Sbjct: 121 EYIENHFEFLDFLVVCYDNKEIALNCGLMLRECIKFPTLAKYILESASFELFFKFVELPN 180

Query: 546 FDVASDAFATFKDLLTRHETAASEFLTARXXXXXXXXXXXXTSANYVTRRQXXXXXXXXX 725
           FDVASDAF+TFKDLLT+H T  +E+LTA             TS+NYVTRRQ         
Sbjct: 181 FDVASDAFSTFKDLLTKHGTVVAEYLTAHYDEFFDQYEKLLTSSNYVTRRQSLKLLSEFL 240

Query: 726 XXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 905
              P+SHIMKRYI EV +LKVMMTLLKDSSKNIQISAFHIFKVFVANPNKP+E+ VILAK
Sbjct: 241 LEPPSSHIMKRYIQEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPREVKVILAK 300

Query: 906 NHEKLLALLHNLSVGKGAEDEQF 974
           NH KLL LLHNLS GKGAEDEQF
Sbjct: 301 NHGKLLELLHNLSAGKGAEDEQF 323


>ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543902|gb|EEF45428.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 631

 Score =  446 bits (1146), Expect = e-123
 Identities = 225/323 (69%), Positives = 254/323 (78%)
 Frame = +3

Query: 6   MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXXNFLSMRQLLSGD 185
           MSFSFFK SR K PLE+VKA++DSL+ALDTKT                N ++MR LL GD
Sbjct: 1   MSFSFFKPSRPKTPLEVVKAMKDSLMALDTKTVVEVKALEKALEEVEKNVVAMRCLLCGD 60

Query: 186 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 365
           GEVEPN + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWS+LLKQ V S YC V
Sbjct: 61  GEVEPNTDQVSQLVLEVCKEDVLALMIHKLPNLGWEARKDLVHCWSVLLKQKVDSKYCSV 120

Query: 366 EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 545
           EYI+NH ELLDFLVVCYDNK++ALNCG MLRECIKF SLAKYIL+S SFELFFK+VELPN
Sbjct: 121 EYIENHFELLDFLVVCYDNKEIALNCGLMLRECIKFSSLAKYILESASFELFFKFVELPN 180

Query: 546 FDVASDAFATFKDLLTRHETAASEFLTARXXXXXXXXXXXXTSANYVTRRQXXXXXXXXX 725
           FDVASDAF+TFKDLL +H+T  +E+LTA             TS NYVTRRQ         
Sbjct: 181 FDVASDAFSTFKDLLIKHDTVVAEYLTAHYDEFFDLYEKLLTSPNYVTRRQSLKLLSDFL 240

Query: 726 XXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 905
              PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFKVFVANPNKP+E+ VILAK
Sbjct: 241 LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPREVKVILAK 300

Query: 906 NHEKLLALLHNLSVGKGAEDEQF 974
           N+E+L+ LL++LSVGKGAEDEQF
Sbjct: 301 NNERLVELLNDLSVGKGAEDEQF 323


>ref|XP_004144960.1| PREDICTED: calcium-binding protein 39-like [Cucumis sativus]
           gi|449471842|ref|XP_004153424.1| PREDICTED:
           calcium-binding protein 39-like [Cucumis sativus]
           gi|449523591|ref|XP_004168807.1| PREDICTED:
           calcium-binding protein 39-like [Cucumis sativus]
          Length = 342

 Score =  441 bits (1133), Expect = e-121
 Identities = 222/323 (68%), Positives = 251/323 (77%)
 Frame = +3

Query: 6   MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXXNFLSMRQLLSGD 185
           MSFSFFK SR K P E+ K I+DSL+ALDTKT                NF++MR +L GD
Sbjct: 1   MSFSFFKPSRPKTPQEVAKFIKDSLMALDTKTVVEVRALEKAMEEVEKNFVTMRCMLIGD 60

Query: 186 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 365
            EVEPN + V Q T EICKE VI L IHKLP+LGWEARKDLV+CWSILLKQ V S+YCCV
Sbjct: 61  AEVEPNADQVLQLTQEICKECVIDLLIHKLPVLGWEARKDLVNCWSILLKQKVASTYCCV 120

Query: 366 EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 545
           +YI+NH ELLDFLVVCYDNK++A+NCGNMLRECIKFP+LAKYIL+S SFELFFK+VELPN
Sbjct: 121 QYIENHLELLDFLVVCYDNKEIAVNCGNMLRECIKFPTLAKYILESASFELFFKFVELPN 180

Query: 546 FDVASDAFATFKDLLTRHETAASEFLTARXXXXXXXXXXXXTSANYVTRRQXXXXXXXXX 725
           FDVASDAF+TFKDLLT+H    S+FL++             TS+NYVTRRQ         
Sbjct: 181 FDVASDAFSTFKDLLTKHPDIVSDFLSSHYDEFFDRYEALLTSSNYVTRRQSLKLLSEFL 240

Query: 726 XXXPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 905
              PNS IMKRYILE+ +LKVMMTLLKDSSKNIQ+SAFHIFKVFVANPNKP+EI +IL K
Sbjct: 241 LESPNSQIMKRYILEIRNLKVMMTLLKDSSKNIQLSAFHIFKVFVANPNKPREIKLILTK 300

Query: 906 NHEKLLALLHNLSVGKGAEDEQF 974
           NHEKLL LLHNLS GKGAEDEQF
Sbjct: 301 NHEKLLELLHNLSPGKGAEDEQF 323


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