BLASTX nr result

ID: Coptis21_contig00011458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011458
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine...   115   4e-24
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...   114   6e-24
emb|CBI20016.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002448532.1| hypothetical protein SORBIDRAFT_06g028570 [S...   110   9e-23

>ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Cucumis sativus]
           gi|449493071|ref|XP_004159184.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g56130-like [Cucumis sativus]
          Length = 1122

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = +3

Query: 3   IYMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPI 182
           +Y+DS+GVSG IP +F  L N+Q++WASDN FTGRIPDFIGNWT+LT LRFQGNSF GPI
Sbjct: 289 LYIDSSGVSGGIPPSFSRLRNLQIVWASDNEFTGRIPDFIGNWTRLTSLRFQGNSFTGPI 348

Query: 183 PSSYSNLTSL 212
           PS++SNLTSL
Sbjct: 349 PSTFSNLTSL 358


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +3

Query: 3   IYMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPI 182
           +Y DS+GVSG IP+TF NL ++ ++WASDN  TG IPDFIGNW+KLTVLR QGNSF+GPI
Sbjct: 202 LYFDSSGVSGEIPSTFANLQSLTIVWASDNELTGNIPDFIGNWSKLTVLRLQGNSFEGPI 261

Query: 183 PSSYSNLTSL 212
           PSS+SNLTSL
Sbjct: 262 PSSFSNLTSL 271


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +3

Query: 3    IYMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPI 182
            +Y DS+GVSG IP+TF NL ++ ++WASDN  TG IPDFIGNW+KLTVLR QGNSF+GPI
Sbjct: 1351 LYFDSSGVSGEIPSTFANLQSLTIVWASDNELTGNIPDFIGNWSKLTVLRLQGNSFEGPI 1410

Query: 183  PSSYSNLTSL 212
            PSS+SNLTSL
Sbjct: 1411 PSSFSNLTSL 1420



 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = +3

Query: 6   YMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPIP 185
           Y DS+G+SG IP+TF NL ++  +WASDN  TG IPDFIGNW+KLTVLR QGNSF+G IP
Sbjct: 275 YFDSSGLSGDIPSTFANLQSLTTVWASDNELTGNIPDFIGNWSKLTVLRLQGNSFEGSIP 334

Query: 186 SSYSNLTSL 212
           SS+SNLTSL
Sbjct: 335 SSFSNLTSL 343


>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
           predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = +3

Query: 3   IYMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPI 182
           IY DS+GVSG IPTTF NL N+  +WASDN  TGRIPDFIGNW+KLT LRF+GN+F+GPI
Sbjct: 199 IYFDSSGVSGEIPTTFANLQNLATVWASDNELTGRIPDFIGNWSKLTSLRFEGNAFEGPI 258

Query: 183 PSSYSNLTSL 212
           PS +SNLT+L
Sbjct: 259 PSVFSNLTNL 268


>ref|XP_002448532.1| hypothetical protein SORBIDRAFT_06g028570 [Sorghum bicolor]
           gi|241939715|gb|EES12860.1| hypothetical protein
           SORBIDRAFT_06g028570 [Sorghum bicolor]
          Length = 886

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/70 (68%), Positives = 59/70 (84%)
 Frame = +3

Query: 3   IYMDSAGVSGPIPTTFVNLVNMQVMWASDNAFTGRIPDFIGNWTKLTVLRFQGNSFQGPI 182
           +Y+DSAG+SGP+P+TF  L  M+ +WASDN FTG+IPDFIGNWT LT LRFQGNSFQGP+
Sbjct: 143 LYIDSAGLSGPLPSTFSRLTRMKTLWASDNDFTGQIPDFIGNWTNLTELRFQGNSFQGPL 202

Query: 183 PSSYSNLTSL 212
           P++ SNL  L
Sbjct: 203 PATLSNLVQL 212


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