BLASTX nr result

ID: Coptis21_contig00011456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011456
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45136.1| unknown [Medicago truncatula]                           69   5e-10
ref|XP_003611654.1| hypothetical protein MTR_5g016330 [Medicago ...    69   5e-10
ref|XP_003631688.1| PREDICTED: uncharacterized protein LOC100260...    68   7e-10
ref|XP_002270434.1| PREDICTED: uncharacterized protein LOC100260...    68   7e-10
ref|XP_004136953.1| PREDICTED: uncharacterized protein LOC101219...    67   2e-09

>gb|AFK45136.1| unknown [Medicago truncatula]
          Length = 90

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/89 (43%), Positives = 50/89 (56%)
 Frame = +2

Query: 32  MAFRSGSFSRPLLNNARAXXXXXXXXXXXXXXXXXXXXXQQQHRRFSISRTFGELGCAQS 211
           MA+RSGS SR + + AR+                     Q +    ++ R  G LGC QS
Sbjct: 1   MAWRSGSLSRSIFSAARSIPTRSSLQHSSTSSIRSHLL-QPRRPLVTVPRALGILGCTQS 59

Query: 212 LMPLHSVVAAARLTSHLTVNARSCCELSQ 298
           LMPLH+  AAARLTSH++V  R+CCELSQ
Sbjct: 60  LMPLHNADAAARLTSHVSVELRACCELSQ 88


>ref|XP_003611654.1| hypothetical protein MTR_5g016330 [Medicago truncatula]
           gi|355512989|gb|AES94612.1| hypothetical protein
           MTR_5g016330 [Medicago truncatula]
          Length = 103

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/89 (43%), Positives = 50/89 (56%)
 Frame = +2

Query: 32  MAFRSGSFSRPLLNNARAXXXXXXXXXXXXXXXXXXXXXQQQHRRFSISRTFGELGCAQS 211
           MA+RSGS SR + + AR+                     Q +    ++ R  G LGC QS
Sbjct: 1   MAWRSGSLSRSIFSAARSIPTRSSLQHSSTSSIRSHLL-QPRRPLVTVPRALGILGCTQS 59

Query: 212 LMPLHSVVAAARLTSHLTVNARSCCELSQ 298
           LMPLH+  AAARLTSH++V  R+CCELSQ
Sbjct: 60  LMPLHNADAAARLTSHVSVELRACCELSQ 88


>ref|XP_003631688.1| PREDICTED: uncharacterized protein LOC100260985 isoform 2 [Vitis
           vinifera]
          Length = 91

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 32  MAFRSGSFSRPLLNNARAXXXXXXXXXXXXXXXXXXXXXQQQHR-RFSISRTFGELGCAQ 208
           MA+R GS SR L++ ARA                      Q  R  F+  R  GELGC Q
Sbjct: 1   MAWR-GSLSRSLMSTARASSLRSSPAAPRVRPPPLAAPRLQTRRLSFTNPRNLGELGCVQ 59

Query: 209 SLMPLHSVVAAARLTSHLTVNARSCCEL 292
           SL+PLH+V+A+ RLTSHL+V+ R+CCEL
Sbjct: 60  SLLPLHNVMASPRLTSHLSVDVRACCEL 87


>ref|XP_002270434.1| PREDICTED: uncharacterized protein LOC100260985 isoform 1 [Vitis
           vinifera]
          Length = 96

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 32  MAFRSGSFSRPLLNNARAXXXXXXXXXXXXXXXXXXXXXQQQHR-RFSISRTFGELGCAQ 208
           MA+R GS SR L++ ARA                      Q  R  F+  R  GELGC Q
Sbjct: 1   MAWR-GSLSRSLMSTARASSLRSSPAAPRVRPPPLAAPRLQTRRLSFTNPRNLGELGCVQ 59

Query: 209 SLMPLHSVVAAARLTSHLTVNARSCCEL 292
           SL+PLH+V+A+ RLTSHL+V+ R+CCEL
Sbjct: 60  SLLPLHNVMASPRLTSHLSVDVRACCEL 87


>ref|XP_004136953.1| PREDICTED: uncharacterized protein LOC101219067 isoform 2 [Cucumis
           sativus] gi|449495679|ref|XP_004159913.1| PREDICTED:
           uncharacterized LOC101219067 isoform 2 [Cucumis sativus]
          Length = 94

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
 Frame = +2

Query: 32  MAFRSGSFSRPLLNNARAXXXXXXXXXXXXXXXXXXXXXQQQ--HRRFSI-SRTFGELGC 202
           MA+RSGS SR L++N R+                      ++   R FS  SR+ GELGC
Sbjct: 1   MAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGC 60

Query: 203 AQSLMPLHSVVAAARLTSHLTVNARSCCELS 295
            QS +P++S+ AA+ LTSHLTVN R+ CELS
Sbjct: 61  VQSFLPIYSMTAASCLTSHLTVNVRAFCELS 91


Top