BLASTX nr result
ID: Coptis21_contig00011448
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011448 (1158 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu... 186 7e-45 ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ... 168 2e-39 ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ... 163 7e-38 dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana] 160 4e-37 ref|NP_181504.2| Nucleotidyltransferase family protein [Arabidop... 160 4e-37 >ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis] gi|223536493|gb|EEF38140.1| zinc finger protein, putative [Ricinus communis] Length = 493 Score = 186 bits (473), Expect = 7e-45 Identities = 115/300 (38%), Positives = 166/300 (55%), Gaps = 8/300 (2%) Frame = -2 Query: 1157 LVIFHFQTCEPAILPPLQELYAGNIAHDLTGFRVTAERQIQDICLTNIARFRTNKMGNIN 978 LVIFHFQTC PAILPPL+E+Y N+ DLTG R AE +I++ C NIAR+ ++K +N Sbjct: 187 LVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSDKYRAVN 246 Query: 977 RSTLSELFISFFKKFSRINTMASEYAICTYTGQWEPITSKESWVAKSHPLVIGDPFELAE 798 RS+LSELFISFF KFS I+ A++ ICT+TGQW I S W+ K++ L I DPFE E Sbjct: 247 RSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTYALFIEDPFEQPE 306 Query: 797 NAARAVGKKELIMISEAFNET-SCMLLGNQEQSFLVTSLVRPQIRSQFSS----NKGYST 633 NAARAV L+ I+EAF T ++L NQ ++ L+ +LVRP+I + + N Y++ Sbjct: 307 NAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEILNCIAGTPVRNLSYTS 366 Query: 632 FRNEGFGQFTDVSSTTRP-VRGQYQGMPLDSYSSPVYSQLQQFPSPVHPIENRFQNWRST 456 + S + P V+ Q+Q M + + +Q Q+ + R QN R Sbjct: 367 LHYQSTHPQISKSMYSSPQVQHQFQNMRQEKHQKIFTAQRQEKHPHSSNSQYRVQNTRLE 426 Query: 455 MHPSPVVSSQRHLSYSTVRPIQNH--YENRQMESPSLPNVYLPRXXXXXXXXXXXVWRPR 282 HPS ++ Q H S+ ++ H Y Q + ++ + +WRP+ Sbjct: 427 KHPS-YLAKQGHESHPENTRLERHPNYFAMQKQESNVNTSTRKKPAQYYHGQGQQLWRPK 485 >ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus] gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus] Length = 464 Score = 168 bits (426), Expect = 2e-39 Identities = 111/297 (37%), Positives = 150/297 (50%), Gaps = 5/297 (1%) Frame = -2 Query: 1157 LVIFHFQTCEPAILPPLQELYAGNIAHDLTGFRVTAERQIQDICLTNIARFRTNKMGNIN 978 LVIFHFQTC PAI PPL+++Y GN+ +L G R E +I C TNIARF++ N Sbjct: 186 LVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCATNIARFKSR---TAN 242 Query: 977 RSTLSELFISFFKKFSRINTMASEYAICTYTGQWEPITSKESWVAKSHPLVIGDPFELAE 798 RS+LSELF+SF KFS I++ ASE IC YTGQW I S W+ K++ + + DPFE E Sbjct: 243 RSSLSELFVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTYAIFVEDPFEQPE 302 Query: 797 NAARAVGKKELIMISEAFNETSCMLLG-NQEQSFLVTSLVRPQIRSQFSSNKGYSTFRNE 621 N ARA+ ++L+ ISEAF T L Q +S ++ L RPQI ++ G ++ Sbjct: 303 NTARAINARQLMRISEAFRMTHLRLTSVYQNRSSILNDLARPQISQLIINSSGSASAPAF 362 Query: 620 GFGQFTDVSSTTRPVRGQYQGMPLDSYSSPVYSQLQQFPSPVHPIENRFQN--WRSTMHP 447 +T P+R Q V+ P P I+++FQN R M Sbjct: 363 NVENYT-------PIRPQ------------VHQARVMQPRPW--IQHQFQNNIPRFNMGN 401 Query: 446 SPVVSSQR-HLSYSTVRPIQNHYENRQMESPSLPNVY-LPRXXXXXXXXXXXVWRPR 282 P ++SQ H S P+ H + S PNV + WRPR Sbjct: 402 FPAINSQAPHAGTSQSHPLVQHKTPKTKRIVSSPNVLNVGEPSKTYSGQGQQKWRPR 458 >ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera] gi|296086183|emb|CBI31624.3| unnamed protein product [Vitis vinifera] Length = 453 Score = 163 bits (413), Expect = 7e-38 Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Frame = -2 Query: 1157 LVIFHFQTCEPAILPPLQELYAGNIAHDLTGFRVTAERQIQDICLTNIARFRTNKMGNIN 978 LV+FH QTC PAILPPL+E+Y GN+A DL G R E QI++ NI RF+ ++ N Sbjct: 187 LVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRDRSRAPN 246 Query: 977 RSTLSELFISFFKKFSRINTMASEYAICTYTGQWEPITSKESWVAKSHPLVIGDPFELAE 798 RS+LSELFISF KF I + ASE IC YTGQW I S W+ +++ L + DPFE E Sbjct: 247 RSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTYELFVEDPFEQPE 306 Query: 797 NAARAVGKKELIMISEAFNETSCMLL-GNQEQSFLVTSLVRPQI-----RSQFSSNKGYS 636 N AR V ++L ISEAF T L NQ+Q L+ +LVRPQI R+ ++ Y Sbjct: 307 NTARGVRSRQLQRISEAFQTTHQRLTSANQDQHSLIDTLVRPQIAQFIRRAPSRNSSAYG 366 Query: 635 TFRNEGFGQFTDVSSTTRPVRGQYQ 561 + + +V+++ + +Q Sbjct: 367 RNNSRTYPSVPNVANSPLQFQNDFQ 391 >dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana] Length = 511 Score = 160 bits (406), Expect = 4e-37 Identities = 109/325 (33%), Positives = 156/325 (48%), Gaps = 30/325 (9%) Frame = -2 Query: 1157 LVIFHFQTCEPAILPPLQELYAGNIAHDLTGFRVTAERQIQDICLTNIARFRTNKMGNIN 978 LVIFHFQTC PAILPPL+ +Y + DLTG R TAE I + NIARF++ + ++N Sbjct: 187 LVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEESIAQVTAANIARFKSERAKSVN 246 Query: 977 RSTLSELFISFFKKFSRINTMASEYAICTYTGQWEPITSKESWVAKSHPLVIGDPFELAE 798 RS+LSEL +SFF KFS IN A E+ +C +TG+WE I+S +W+ K++ L + DPFE Sbjct: 247 RSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRWETISSNTTWLPKTYSLFVEDPFEQPV 306 Query: 797 NAARAVGKKELIMISEAFNETSCMLLGNQEQSFLVTSLVRPQIR-SQFSSNKGYSTFRNE 621 NAAR+V ++ L I++ F TS L+ ++ ++ L I+ S + + S Sbjct: 307 NAARSVSRRNLDRIAQVFQITSRRLVSECNRNSIIGILTGQHIQESLYRTISLPSQHHAN 366 Query: 620 GFGQFTDVSSTTRPVRGQYQGMPLDSYSSP--------VYSQLQQFPSPVHPIE------ 483 G ++ RP Q Q SY++P S+ QQ + +P Sbjct: 367 GMHNVRNLHGQARPQNQQMQQNWSQSYNTPNPPHWPPLTQSRPQQNWTQNNPRNLQGQPP 426 Query: 482 NRFQNW-----RSTMHPSPVVSSQRHLSYSTVRPIQN---------HYENRQMESPSLPN 345 + Q W T SP S R L ++ QN H P+ N Sbjct: 427 VQGQTWPVITQTQTQQKSPYKSGNRPLKNTSAGSSQNQGHIGKPSGHMNGVNSARPAYTN 486 Query: 344 -VYLPRXXXXXXXXXXXVWRPRHSE 273 V R +WRPRH + Sbjct: 487 GVNSARPPSKIPSQGGQIWRPRHEQ 511 >ref|NP_181504.2| Nucleotidyltransferase family protein [Arabidopsis thaliana] gi|53850481|gb|AAU95417.1| At2g39740 [Arabidopsis thaliana] gi|55733735|gb|AAV59264.1| At2g39740 [Arabidopsis thaliana] gi|330254623|gb|AEC09717.1| Nucleotidyltransferase family protein [Arabidopsis thaliana] Length = 511 Score = 160 bits (406), Expect = 4e-37 Identities = 109/325 (33%), Positives = 156/325 (48%), Gaps = 30/325 (9%) Frame = -2 Query: 1157 LVIFHFQTCEPAILPPLQELYAGNIAHDLTGFRVTAERQIQDICLTNIARFRTNKMGNIN 978 LVIFHFQTC PAILPPL+ +Y + DLTG R TAE I + NIARF++ + ++N Sbjct: 187 LVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEESIAQVTAANIARFKSERAKSVN 246 Query: 977 RSTLSELFISFFKKFSRINTMASEYAICTYTGQWEPITSKESWVAKSHPLVIGDPFELAE 798 RS+LSEL +SFF KFS IN A E+ +C +TG+WE I+S +W+ K++ L + DPFE Sbjct: 247 RSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRWETISSNTTWLPKTYSLFVEDPFEQPV 306 Query: 797 NAARAVGKKELIMISEAFNETSCMLLGNQEQSFLVTSLVRPQIR-SQFSSNKGYSTFRNE 621 NAAR+V ++ L I++ F TS L+ ++ ++ L I+ S + + S Sbjct: 307 NAARSVSRRNLDRIAQVFQITSRRLVSECNRNSIIGILTGQHIQESLYRTISLPSQHHAN 366 Query: 620 GFGQFTDVSSTTRPVRGQYQGMPLDSYSSP--------VYSQLQQFPSPVHPIE------ 483 G ++ RP Q Q SY++P S+ QQ + +P Sbjct: 367 GMHNVRNLHGQARPQNQQMQQNWSQSYNTPNPPHWPPLTQSRPQQNWTQNNPRNLQGQPP 426 Query: 482 NRFQNW-----RSTMHPSPVVSSQRHLSYSTVRPIQN---------HYENRQMESPSLPN 345 + Q W T SP S R L ++ QN H P+ N Sbjct: 427 VQGQTWPVITQTQTQQKSPYKSGNRPLKNTSAGSSQNQGHIGKPSGHMNGVNSARPAYTN 486 Query: 344 -VYLPRXXXXXXXXXXXVWRPRHSE 273 V R +WRPRH + Sbjct: 487 GVNSARPPSKIPSQGGQIWRPRHEQ 511