BLASTX nr result

ID: Coptis21_contig00011425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011425
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   157   2e-52
ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254...   128   5e-47
ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203...   125   1e-44
gb|ABK26133.1| unknown [Picea sitchensis]                             119   5e-44
gb|AAC32109.1| hypothetical protein [Picea mariana] gi|116781961...   123   1e-43

>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  157 bits (398), Expect(2) = 2e-52
 Identities = 74/120 (61%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +3

Query: 267 LYGNRGCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXX 446
           ++G+RGCLGCCTK TPIIAVDEPSKGL+IQGRTVKKPSISEDFWSTSTCE+D        
Sbjct: 1   MHGSRGCLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQR 60

Query: 447 XXXXXXXXXXXLEAHCGVGSTSSPPEFVNHGYILWNQTRQQWIGN-RPRNRTHHVREPRL 623
                      L  + G+GSTS+  EF+NHG +LWNQTR QW+GN R  N++  +REPRL
Sbjct: 61  SISSISTSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRL 120



 Score = 75.9 bits (185), Expect(2) = 2e-52
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +1

Query: 703 WNVTYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD 819
           WN TY+ LLGTN+ F QPIPLSEM+DFLVDVWEQEGMYD
Sbjct: 122 WNATYEGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254371 isoform 1 [Vitis
           vinifera]
          Length = 173

 Score =  128 bits (322), Expect(3) = 5e-47
 Identities = 62/114 (54%), Positives = 70/114 (61%)
 Frame = +3

Query: 282 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 461
           GCLGCC+K T II V E  KGL IQGRT  +PS  EDFWSTST EMD             
Sbjct: 20  GCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNSAVQSQGSISSI 79

Query: 462 XXXXXXLEAHCGVGSTSSPPEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 623
                  + H   GSTS+PPEFVNHG +LWNQTRQQWIGN+       V+EPR+
Sbjct: 80  STSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNRKQVQEPRI 133



 Score = 81.6 bits (200), Expect(3) = 5e-47
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = +1

Query: 700 SWNVTYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD 819
           SWN TY+SLLGTNKP PQPIPL EMVDFLVDVWEQEG+YD
Sbjct: 134 SWNATYESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 173



 Score = 26.2 bits (56), Expect(3) = 5e-47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 220 MLLGRSIGAWIRHFFACMG 276
           M + RS+ +WI H  ACMG
Sbjct: 1   MQICRSVPSWICHIVACMG 19


>ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203426 [Cucumis sativus]
           gi|449523626|ref|XP_004168824.1| PREDICTED:
           uncharacterized LOC101203426 [Cucumis sativus]
          Length = 177

 Score =  125 bits (315), Expect(3) = 1e-44
 Identities = 61/111 (54%), Positives = 68/111 (61%)
 Frame = +3

Query: 282 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 461
           GC GCCTK TPIIAVDEPSKGL+IQGR VKKPSIS+ FWSTSTC++D             
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 462 XXXXXXLEAHCGVGSTSSPPEFVNHGYILWNQTRQQWIGNRPRNRTHHVRE 614
                 L      GS SS  EFVNHG +LWNQTR QWIG+     T    +
Sbjct: 81  STSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQ 131



 Score = 75.9 bits (185), Expect(3) = 1e-44
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = +1

Query: 700 SWNVTYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD 819
           SW  TYDSLLGT +PFP PIPLSEMV+FLV+VWEQEG+YD
Sbjct: 138 SWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177



 Score = 26.9 bits (58), Expect(3) = 1e-44
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 220 MLLGRSIGAWIRHFFACMG 276
           ++L  S  AWI   FACMG
Sbjct: 2   VMLNSSFAAWISRLFACMG 20


>gb|ABK26133.1| unknown [Picea sitchensis]
          Length = 172

 Score =  119 bits (298), Expect(3) = 5e-44
 Identities = 59/114 (51%), Positives = 72/114 (63%)
 Frame = +3

Query: 282 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 461
           GCLG C K TPIIAVDEPSK LK+QGR++K PS SEDFWS+ST EMD             
Sbjct: 20  GCLGGCAKPTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMDNSTVQSQRSVSSI 79

Query: 462 XXXXXXLEAHCGVGSTSSPPEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 623
                  ++     + ++  EFVNH  ILWN+ RQQW+G+RPRN T  +REP L
Sbjct: 80  SASNQNSDSR-AANTNANNTEFVNHALILWNEMRQQWVGDRPRNHTRQLREPVL 132



 Score = 79.3 bits (194), Expect(3) = 5e-44
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 700 SWNVTYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD 819
           SWN TY+SLLGTN+PFPQ IPLSEMV+FLVDVWEQEG+YD
Sbjct: 133 SWNTTYESLLGTNRPFPQLIPLSEMVEFLVDVWEQEGLYD 172



 Score = 27.7 bits (60), Expect(3) = 5e-44
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 220 MLLGRSIGAWIRHFFACMG 276
           ML+ + + AW RH  ACMG
Sbjct: 1   MLIPKVMRAWFRHIIACMG 19


>gb|AAC32109.1| hypothetical protein [Picea mariana] gi|116781961|gb|ABK22316.1|
           unknown [Picea sitchensis]
          Length = 158

 Score =  123 bits (308), Expect(2) = 1e-43
 Identities = 60/119 (50%), Positives = 75/119 (63%)
 Frame = +3

Query: 267 LYGNRGCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXX 446
           ++GN GCLG C K TPIIAVDEPSK LK+QGR++K PS SEDFWS+ST EMD        
Sbjct: 1   MHGNSGCLGGCAKPTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMDNSTVQSQR 60

Query: 447 XXXXXXXXXXXLEAHCGVGSTSSPPEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 623
                       ++     + ++  EFVNH  ILWN+ RQQW+G+RPRN    +REP L
Sbjct: 61  SVSSISASNQNSDSR-AANTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREPVL 118



 Score = 80.9 bits (198), Expect(2) = 1e-43
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +1

Query: 700 SWNVTYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD 819
           SWN TY+SLLGTN+PFPQ IPLSEMVDFLVDVWEQEG+YD
Sbjct: 119 SWNTTYESLLGTNRPFPQLIPLSEMVDFLVDVWEQEGLYD 158


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