BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011416
         (1988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ...   425   e-116
ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent...   413   e-113
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent...   404   e-110
ref|XP_002441826.1| hypothetical protein SORBIDRAFT_08g002960 [S...   362   2e-97
tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays]            359   2e-96

>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 493

 Score =  425 bits (1093), Expect = e-116
 Identities = 256/560 (45%), Positives = 336/560 (60%), Gaps = 1/560 (0%)
 Frame = +1

Query: 55   MPKGDDALXXXXXXXXXXXXXADTSTSNVSSRIAGIIASKQRRKAGKRRKCEGMCFSLPS 234
            M KGDD +              + S SNVS+R+A IIA+K+RR +GKRR C+GMCFSLP+
Sbjct: 1    MAKGDDTVTKKRNKAKRKKLNRENS-SNVSARVASIIAAKKRRLSGKRRMCQGMCFSLPT 59

Query: 235  PDDPFNDKNSLKNFNKKNVQKPAPSETEAGASVTQKGDASRKVFSSRQRDPQKDKSKNVL 414
             DDPFN+++   + N K                                    DK K V 
Sbjct: 60   LDDPFNERHGRMDINVK------------------------------------DKKKKV- 82

Query: 415  TSLFGKYERNTVQKVETKDGMLGKGGVIRTQRRLHGSSDGPSKFLTACLKSIQNTLL-DK 591
                     NT +KV+        G  +  Q +    SDGPSKF   CL +I+  L  D 
Sbjct: 83   ---------NTREKVQLN------GNDLNHQEQACDYSDGPSKFFILCLNAIEKALRHDG 127

Query: 592  SLSDRKSENSLLLNQWGAEFLTCSLLGTDILETTGGCSSEEQIAWMVSXXXXXXXXKEKE 771
            + +D   E  LL+N WG EFL    +G DILET+G   + EQIAW+VS        KEKE
Sbjct: 128  TYNDE--EKPLLVNPWGLEFLKFCSIGKDILETSGSSCTIEQIAWIVSIAADAIARKEKE 185

Query: 772  GLSVPNPFLLILVPSKEKAIQVRLLCKPLKALGIHTVSLHTGASLDHQIDGLKCCEPEFI 951
            GLS  +PFLL LVPS+EKA +VR++CKPLK LG+HTVSLH GASLDHQI GLK CEPEF+
Sbjct: 186  GLSFSSPFLLFLVPSQEKAAKVRMVCKPLKDLGVHTVSLHAGASLDHQIRGLKSCEPEFL 245

Query: 952  ISTPERLLELVSLKAIDISGLSFLVVDGLESFAISGLLDNVNSIRQATLGASLTVVFCDS 1131
            +STPERL+EL+SLKAIDI+G+SFLVVDGL+S    G L ++ SIRQ+  G   TV F + 
Sbjct: 246  VSTPERLMELISLKAIDITGVSFLVVDGLDSLYQDGSLGSLKSIRQSISGNPHTVAFNNL 305

Query: 1132 FGPLSTSAVQSLLGGPISRLSLSDSIASQSACISQCVHMCTSEEKPSKGIHVLNQECGKR 1311
            F      A+Q+L  G I+RLSLSDSI SQSACI Q + +CTSE+K       L++ C   
Sbjct: 306  FNHACVPALQNLFVGSINRLSLSDSICSQSACIFQTIEVCTSEQKK------LSKLC--- 356

Query: 1312 TSSNHLKVLFVEEISSKARSSAAALIAEGYAMSIDTSDCSEVAYCKETTTVTVTDLEHVH 1491
              S+ LK+LF+ E + KA S    L + GY++S +++        +    V+V + EH+ 
Sbjct: 357  --SHRLKLLFIVENNKKAASLVKILKSNGYSVSTESNCEVSNVDTRMKPVVSVINAEHI- 413

Query: 1492 NRTDMGEFEIVVVINFPPEIDDYVEILTRMARQSVNGVLHCCFCQEDASLAGPLIDILEQ 1671
            +  D+G +EI+++ NF   ID+Y++ILTRMAR + +G+LH    +EDA LAGPLI+ILEQ
Sbjct: 414  STADLGVYEIIILPNFVLSIDNYIQILTRMARHTTHGILHSFMTEEDALLAGPLIEILEQ 473

Query: 1672 CEQNVPEFLRSYHNSVSMSE 1731
            C Q VPE LR+ H   SMSE
Sbjct: 474  CGQAVPETLRTLHLRSSMSE 493


>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Cucumis sativus] gi|449517699|ref|XP_004165882.1|
            PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase
            prp5-like [Cucumis sativus]
          Length = 562

 Score =  413 bits (1062), Expect = e-113
 Identities = 252/559 (45%), Positives = 331/559 (59%), Gaps = 9/559 (1%)
 Frame = +1

Query: 55   MPKGDDALXXXXXXXXXXXXXADTSTSN-VSSRIAGIIASKQRRKAGKRRKCEGMCFSLP 231
            M KGDDAL             + +  S+ VS+R+A IIA+K+RR +GKRR+C+GMCFSLP
Sbjct: 1    MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 232  SPDDPFNDKNSLKNFNKKNVQKPAPSETEAGASVTQKGDASRKVFSSRQRDPQKDKSKNV 411
            +PDDP+ND+N  K+  K    K +  E     S +      R V     R  ++     +
Sbjct: 61   TPDDPYNDRNGKKD-TKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENARSSKEGSGGTL 119

Query: 412  LTSLFGKYERNTVQKVETKDGMLGKGGVIRTQRRLHGSSDGPSKFLTACLKSIQNTLLDK 591
             +    K  R+      TK+    KG V   Q     SS  PSKFL  CL +I+N L   
Sbjct: 120  PSGRVAK--RSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFLILCLSAIENALYHD 177

Query: 592  SLSDRKSENS-LLLNQWGAEFLTCSLLGTDILETTGGCSSEEQIAWMVSXXXXXXXXKEK 768
            S+   KS N  L  + WG EF  C   G DIL+T+G  S++E+IAW+VS        KEK
Sbjct: 178  SI---KSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 234

Query: 769  EGLSVPNPFLLILVPSKEKAIQVRLLCKPLKALGIHTVSLHTGASLDHQIDGLKCCEPEF 948
            EG S  +PFLL LVP++EKA Q+R +CKPLKALG+HTVS+H GASL HQI GLK CEPEF
Sbjct: 235  EGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSCEPEF 294

Query: 949  IISTPERLLELVSLKAIDISGLSFLVVDGLESFAISGLLDNVNSIRQATLGASLTVVFCD 1128
            ++STPERLLELV+++AIDISG+S LVVDGLES +  G LD   SIR++      T+VF D
Sbjct: 295  LVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTIVFSD 354

Query: 1129 SFGPLSTSAVQSLLGGPISRLSLSDSIASQSACISQCVHMCTSE-EKPSKGIHVLNQECG 1305
            SF       +QSLLGGPI RLSL+ S+A QSACI Q ++  TSE EK SK I  L++  G
Sbjct: 355  SFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALDRANG 414

Query: 1306 KRTSSNHLKVLFVEEISSKARSSAAAL------IAEGYAMSIDTSDCSEVAYCKETTTVT 1467
             +     LK+LF+          AAAL      I  G    +     +     K    V 
Sbjct: 415  SQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKLRPVVA 474

Query: 1468 VTDLEHVHNRTDMGEFEIVVVINFPPEIDDYVEILTRMARQSVNGVLHCCFCQEDASLAG 1647
             TD+E + N  D+G +E + +++  P ID YVEILT MAR + NGVLH    +E+AS+AG
Sbjct: 475  KTDIEQI-NTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEASVAG 533

Query: 1648 PLIDILEQCEQNVPEFLRS 1704
             L++ILEQC Q+VP+ +R+
Sbjct: 534  SLVEILEQCGQDVPKTVRN 552


>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Glycine max]
          Length = 563

 Score =  404 bits (1039), Expect = e-110
 Identities = 245/574 (42%), Positives = 339/574 (59%), Gaps = 15/574 (2%)
 Frame = +1

Query: 55   MPKGDDALXXXXXXXXXXXXXADTSTSNVSSRIAGIIASKQRRKAGKRRKCEGMCFSLPS 234
            M KG+DAL               + +S+VS+++A +IA+K+RRKAGKRR C+GMCFSLP+
Sbjct: 1    MAKGEDALIRKKNKKLRKKN--SSGSSSVSAKVAAVIAAKKRRKAGKRRMCQGMCFSLPT 58

Query: 235  PDDPFNDKNSLKNFNKKNVQKPAPSETEA------GASVTQKGDA--SRKV---FSSRQR 381
             DDPFND+   +    K  +K + S+ +       G S   K  A   RK+    +  QR
Sbjct: 59   LDDPFNDRGGKEETKTKGPKKKSHSKPKDKMDHLNGKSADGKKGAVGGRKIARELNDLQR 118

Query: 382  DPQKDKSKNVLT-SLFGKYERNTVQKVETKDGMLGKGGVIRTQRRLHGSSDGPSKFLTAC 558
            + +   + N LT       ER  +   E          +  T++R    S+ PSKF+  C
Sbjct: 119  ENESVTASNNLTHKCIINSERKNIDMTEMAH-------LCGTKQRDCDISEFPSKFIFWC 171

Query: 559  LKSIQNTLLDKSLSDRKSENSLLLNQWGAEFLTCSLLGTDILETTGGCSSEEQIAWMVSX 738
            L SI+N L           NS  LN WG EFL C   G D++ET+G  ++ EQIAWMVS 
Sbjct: 172  LSSIENALRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLIETSGTSATAEQIAWMVSG 231

Query: 739  XXXXXXXKEKEGLSVPNPFLLILVPSKEKAIQVRLLCKPLKALGIHTVSLHTGASLDHQI 918
                   KEKEGLS P PFLL LVPS+EK+ QVR +CKPLK++GIHTVS+H GASLDHQI
Sbjct: 232  AADTFVRKEKEGLSFPGPFLLFLVPSQEKSTQVRTVCKPLKSVGIHTVSIHPGASLDHQI 291

Query: 919  DGLKCCEPEFIISTPERLLELVSLKAIDISGLSFLVVDGLESFAISGLLDNVNSIRQATL 1098
             GLK CEPEF++STPERLLELVS KAIDISG+S LV+DGL +   +G  D V SI+    
Sbjct: 292  QGLKTCEPEFLVSTPERLLELVSTKAIDISGVSMLVIDGLNTICSAGHADTVKSIKNCIS 351

Query: 1099 GASLTVVFCDSFGPLSTSAVQSLLGGPISRLSLSDSIASQSACISQCVHMCTSEE-KPSK 1275
            G    V+F D    +S   V+ LL G I R+SL++SI S S+ I Q V +CTSEE K   
Sbjct: 352  GNPRVVIFNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSYIIQSVEVCTSEEDKVVM 411

Query: 1276 GIHVLNQECGKRTSSNHLKVLFVEEISSKARSSAAALIAEGYAMSIDT--SDCSEVAYCK 1449
             I  L+Q     T ++++  +  +++  K       L ++GY++S+D+  ++ ++     
Sbjct: 412  SIEALDQFQSNSTQNSNMLYILSKDV--KCHKLVKTLKSKGYSVSLDSDAANINDRVDSD 469

Query: 1450 ETTTVTVTDLEHVHNRTDMGEFEIVVVINFPPEIDDYVEILTRMARQSVNGVLHCCFCQE 1629
                V++ DL  + + TD+G +++VV+ +F P ID YV ILT+MAR SVNGVLH    + 
Sbjct: 470  RRAAVSLIDLVQI-STTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKR 528

Query: 1630 DASLAGPLIDILEQCEQNVPEFLRSYHNSVSMSE 1731
            D  LA PLI +LEQC Q VP+ L+  +++ +M E
Sbjct: 529  DTELAAPLIAVLEQCGQEVPQTLQDLNHTSNMLE 562


>ref|XP_002441826.1| hypothetical protein SORBIDRAFT_08g002960 [Sorghum bicolor]
            gi|241942519|gb|EES15664.1| hypothetical protein
            SORBIDRAFT_08g002960 [Sorghum bicolor]
          Length = 529

 Score =  362 bits (930), Expect = 2e-97
 Identities = 235/562 (41%), Positives = 314/562 (55%), Gaps = 8/562 (1%)
 Frame = +1

Query: 55   MPKGDDALXXXXXXXXXXXXXADTSTSNVSSRIAGIIASKQRRKAGKRRKCEGMCFSLPS 234
            M KGDDAL             +  S + VS+R+A IIASK+RRK+GKRR CEGMCFSLP+
Sbjct: 1    MAKGDDALARKRNRVRRKRLRS--SENAVSARVAAIIASKRRRKSGKRRGCEGMCFSLPT 58

Query: 235  PDDPFNDKNSLKNFNKKNVQKPAPSETEAGASVTQKGDASRKVFSSRQRDPQKDKSKNVL 414
            PDDPFN+++      KK      P+E  A A   + GD           DP+K  +    
Sbjct: 59   PDDPFNERHG-----KKRKVDDEPTEDTAAA---KDGD-----------DPKKKGANTKK 99

Query: 415  TSLFGKYERNTVQKVETKDGMLGKGGVIRTQRRLHGSSDGPSKFLTACLKSIQNTLLDKS 594
                 K       K + K   + +      + R+    D PSKFL  CL +I++TL  + 
Sbjct: 100  EQPVAKAGAEAKAKAKAKSKAVRERATGADEGRV--DLDRPSKFLVVCLNAIRDTLAPED 157

Query: 595  LSDRKSENSLLLNQWGAEFLTC--SLLGTDILETTGGCSSEEQIAWMVSXXXXXXXXKEK 768
                          WG E   C  +   +D+L+ +G C++ +Q AW+VS        KE+
Sbjct: 158  GGGSIHG----AGDWGVELWRCCSAQAPSDVLDASGACATVDQTAWLVSTACDIVARKER 213

Query: 769  EGLSVPNPFLLILVPSKEKAIQVRLLCKPLKALGIHTVSLHTGASLDHQIDGLKCCEPEF 948
             G+ V  PFLL LVPS+EKA QVR +CKPLK LGIH+VSLH GAS++HQI GLK CEPEF
Sbjct: 214  LGMVVSCPFLLYLVPSQEKAAQVRSICKPLKPLGIHSVSLHPGASIEHQISGLKTCEPEF 273

Query: 949  IISTPERLLELVSLKAIDISGLSFLVVDGLESFAISGLLDNVNSIRQATLGASLTVVFCD 1128
            +I+TPERLLELVSLKAIDIS +S LV+DGL+ F      D + SIR A        +F D
Sbjct: 274  LIATPERLLELVSLKAIDISSVSMLVIDGLKCFVDHNASDKIFSIRDAISNNPQITIFTD 333

Query: 1129 SFGPLSTSAVQSLLGGPISRLSLSDSIASQSACISQCVHMCTSEE-KPSKGIHVLN---Q 1296
                   +  +SLL G I++LS++DS++S+SA I+Q VH C SEE K SK   +L    Q
Sbjct: 334  PSDKKVAAMAKSLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKTSKVKEILEGILQ 393

Query: 1297 ECGKRTSSNHLKVLFVEEISSKARSSAAALIAEGYAMSIDTSDCSEVAYCKE--TTTVTV 1470
               K+TS    KVL V     KAR  +++L  +   + ID S  S    C       V V
Sbjct: 394  SHPKKTS----KVLLVVANDQKARYMSSSLKLKNCTV-IDDSHGSSFTICSSLGLMNVIV 448

Query: 1471 TDLEHVHNRTDMGEFEIVVVINFPPEIDDYVEILTRMARQSVNGVLHCCFCQEDASLAGP 1650
             D E++   TD  EFE V+V++ PP +D+YVEILT +A   + G +H  FC  DAS+A P
Sbjct: 449  KDRENM-AVTDAEEFETVLVVDLPPSVDEYVEILTGVALHVIGGEVHSIFCNADASIAKP 507

Query: 1651 LIDILEQCEQNVPEFLRSYHNS 1716
            L ++L  C Q VPEF ++  +S
Sbjct: 508  LAELLADCRQVVPEFFKNLESS 529


>tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays]
          Length = 525

 Score =  359 bits (921), Expect = 2e-96
 Identities = 231/568 (40%), Positives = 322/568 (56%), Gaps = 14/568 (2%)
 Frame = +1

Query: 55   MPKGDDALXXXXXXXXXXXXXADTSTSNVSSRIAGIIASKQRRKAGKRRKCEGMCFSLPS 234
            M KGDDAL             +  S + VS+R+A IIASK RRK+GKRR CEGMCFSLP+
Sbjct: 1    MAKGDDALARKRNRVRRKRLRS--SENAVSARVAAIIASKHRRKSGKRRACEGMCFSLPT 58

Query: 235  PDDPFNDKNSLKNFNKKNVQKPAPSETEAGASVTQKGDASRKVFSSRQRDP-----QKDK 399
            PDDPFN+++      +K+     P++  A  +    G+  +K  +++++ P      + K
Sbjct: 59   PDDPFNERHG-----RKHKLDDEPADDTAADAAEDSGNPKKKGANTKKQQPVAKYGAEAK 113

Query: 400  SKNVLTSLFGKYERNTVQKVETKDGMLGKGGVIRTQRRLHGSSDGPSKFLTACLKSIQNT 579
            SK V        ER T  +V                  + G  D PSKFL  CL +I++ 
Sbjct: 114  SKAVR-------ERETGAEV------------------VRGDFDRPSKFLVVCLNAIRD- 147

Query: 580  LLDKSLSDRKSENSLL-LNQWGAEFLTC--SLLGTDILETTGGCSSEEQIAWMVSXXXXX 750
                +++  +   S+     WG E   C  +   +D+L+ +G C++  Q AW+VS     
Sbjct: 148  ----AVAPEEGGGSIHGAGDWGVELWRCCSAQAPSDVLDASGACATVAQTAWLVSTACDI 203

Query: 751  XXXKEKEGLSVPNPFLLILVPSKEKAIQVRLLCKPLKALGIHTVSLHTGASLDHQIDGLK 930
               KE+ G+ V  PFLL LV S++KA QVR +CKPLK LGIH+VSLH GAS++HQI GLK
Sbjct: 204  VARKERHGMVVSCPFLLYLVSSQDKAAQVRSICKPLKPLGIHSVSLHPGASIEHQISGLK 263

Query: 931  CCEPEFIISTPERLLELVSLKAIDISGLSFLVVDGLESFAISGLLDNVNSIRQATLGASL 1110
             CEPEF+I+TPERLLELVSLKAIDISG+S LV+DGL+ F    + D + SIR A      
Sbjct: 264  TCEPEFLIATPERLLELVSLKAIDISGVSMLVIDGLKCFVDHNVSDKIFSIRDAISNNLQ 323

Query: 1111 TVVFCDSFGPLSTSAVQSLLGGPISRLSLSDSIASQSACISQCVHMCTSEE-KPSKGIHV 1287
              +F D       +  ++LL G I++LS++DS++S+SA I+Q VH C SEE K +K   +
Sbjct: 324  ITIFTDPSDKNIATMAKNLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKTTKVKEI 383

Query: 1288 LN---QECGKRTSSNHLKVLFVEEISSKARSSAAALIAEGYAMSIDTSDCSEVAYCKET- 1455
            L    Q+  K+TS    KVL V     KAR  + +L  E   + ID S  +    C    
Sbjct: 384  LEQILQDHPKKTS----KVLLVAASDKKARLMSLSLKLENCTV-IDDSCGNSFTICSSVG 438

Query: 1456 -TTVTVTDLEHVHNRTDMGEFEIVVVINFPPEIDDYVEILTRMARQSVNGVLHCCFCQED 1632
               V V D E++ + TD+  FE V+V++ PP +D+Y+EILT  A   + G +H  FC  D
Sbjct: 439  LMNVIVKDRENM-SVTDVEAFETVLVVDLPPSVDEYIEILTGAALHVIGGEVHSIFCNTD 497

Query: 1633 ASLAGPLIDILEQCEQNVPEFLRSYHNS 1716
            AS+A PL  +L  C Q VPEFL+S  +S
Sbjct: 498  ASVAKPLAQLLADCGQVVPEFLKSLKSS 525