BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011415
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   137   3e-30

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Vitis vinifera]
           gi|297744374|emb|CBI37344.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score =  147 bits (371), Expect = 2e-33
 Identities = 73/115 (63%), Positives = 87/115 (75%)
 Frame = +1

Query: 1   TEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLA 180
           +E+IKP+C+TL SLV+AYGRAG AEKIG VLRFIENSDV LD  FFNCL+DAYGR+G  A
Sbjct: 378 SERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFA 437

Query: 181 EMKEASEMMIERGCKADRITYSTMIKAYASNGITSQAKELEDMISKRKSDSRETG 345
           EMK   EMM ++GCK D+ITY TMIKAY   G+TS AKEL+ ++        E G
Sbjct: 438 EMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPDETRLEMG 492


>ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|222844771|gb|EEE82318.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  146 bits (369), Expect = 4e-33
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = +1

Query: 1   TEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLA 180
           +E+IKP+C+TL SLV+AY  AG  EKIGSVLRFIENSDVTLDT FFNCL+DAYGR+   A
Sbjct: 270 SERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFA 329

Query: 181 EMKEASEMMIERGCKADRITYSTMIKAYASNGITSQAKELEDMI 312
           EMKE  E+M E+GCK D++TY TMIKAY+  G+TS AK+L +++
Sbjct: 330 EMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLL 373



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/89 (28%), Positives = 51/89 (57%)
 Frame = +1

Query: 10  IKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLAEMK 189
           I+PN  T + L+ +YG+AG+ +K+ +V+ +++    +     +N ++DA+GR G L +M+
Sbjct: 203 IEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQME 262

Query: 190 EASEMMIERGCKADRITYSTMIKAYASNG 276
               +M     K   +T  ++++AY   G
Sbjct: 263 YLFRLMRSERIKPSCVTLCSLVRAYREAG 291


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  146 bits (369), Expect = 4e-33
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = +1

Query: 1   TEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLA 180
           +E+IKP+C+TL SLV+AY  AG  EKIGSVLRFIENSDVTLDT FFNCL+DAYGR+   A
Sbjct: 367 SERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFA 426

Query: 181 EMKEASEMMIERGCKADRITYSTMIKAYASNGITSQAKELEDMI 312
           EMKE  E+M E+GCK D++TY TMIKAY+  G+TS AK+L +++
Sbjct: 427 EMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLL 470



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/89 (28%), Positives = 51/89 (57%)
 Frame = +1

Query: 10  IKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLAEMK 189
           I+PN  T + L+ +YG+AG+ +K+ +V+ +++    +     +N ++DA+GR G L +M+
Sbjct: 300 IEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQME 359

Query: 190 EASEMMIERGCKADRITYSTMIKAYASNG 276
               +M     K   +T  ++++AY   G
Sbjct: 360 YLFRLMRSERIKPSCVTLCSLVRAYREAG 388


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Glycine max]
          Length = 515

 Score =  137 bits (345), Expect = 2e-30
 Identities = 65/104 (62%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   TEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLA 180
           +E+IKP+C+TL SLV+AY RAG  EKI  VLRF+ENSDV LDT FFNCL+DAY R+G LA
Sbjct: 397 SERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLA 456

Query: 181 EMKEASEMMIERGCKADRITYSTMIKAYASNGITSQAKELEDMI 312
           EMK   EMM + GCK D +TY TMIK Y   G+ S AKEL +++
Sbjct: 457 EMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELL 500


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  137 bits (344), Expect = 3e-30
 Identities = 65/103 (63%), Positives = 82/103 (79%)
 Frame = +1

Query: 1   TEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDAYGRMGRLA 180
           +E+IKP+C+TL SLV+AYG+A   EKI  VLRFIENSD+TLDT FFNCL+DAYGRMG  A
Sbjct: 395 SERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFA 454

Query: 181 EMKEASEMMIERGCKADRITYSTMIKAYASNGITSQAKELEDM 309
           EMK    +M ++G + D+ITY TMIKAY+S G+T   KEL+D+
Sbjct: 455 EMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDL 497