BLASTX nr result

ID: Coptis21_contig00011413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011413
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|2...    93   8e-17
ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|2...    84   4e-14
ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_002528498.1| transcription factor, putative [Ricinus comm...    78   3e-12
emb|CBI28638.3| unnamed protein product [Vitis vinifera]               75   2e-11

>ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|222848199|gb|EEE85746.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 56/102 (54%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
 Frame = -1

Query: 333 MPLEGMFIDPCSSMPAPDLSLHISPPN-SAPSSFCNSNNGNDA----AGFDVWKRGDGTI 169
           MPLEG+FI+P SS P PDLSLHISPPN S+PSS CN  N N +    A F++  R + T 
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNISSPSSLCNKKNNNISNKVDASFNLLGRQEATH 59

Query: 168 KCNSDSSVRSERQAYTELSLANLTSGSTEADSRWIRSLESIR 43
           K N+ SS+RS+ QAY ELSLA+ T+G  E   R  R+L S R
Sbjct: 60  KPNTVSSMRSDSQAYIELSLAHPTTGLDEESRRSRRNLSSSR 101


>ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|222844638|gb|EEE82185.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
 Frame = -1

Query: 333 MPLEGMFIDPCSSMPAPDLSLHISPPN-SAPSSFCNSNNG---NDAAGFDVWKRGDGTIK 166
           MPLEG+FI+P SS P PDLSLHISPPN S+PSS CN+N+       A F++  R +   K
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNISSPSSICNNNSNIRDKIDASFNLLGRQEAIRK 59

Query: 165 CNSDSSVRSERQAYTELSLANLTSGSTEADSRWIRSLESIR 43
            N+  S+RS+ QA  ELSLA+ T+G  E   R  R+L S R
Sbjct: 60  SNTAISMRSDSQACIELSLAHPTTGLNEESIRSRRNLSSAR 100


>ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|222870611|gb|EEF07742.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = -1

Query: 333 MPLEGMFIDPCSSMPAPDLSLHISPPNSAPSSFCNSNNGNDAAGFDVWKRGDGTIKCNSD 154
           M  +G+F D  S    PDLSLHIS PNSAPSS C   N  D+A FD+W++ DG IK +SD
Sbjct: 1   MSQKGIF-DKQSLNLIPDLSLHISLPNSAPSSICTGTNDGDSA-FDIWRKDDGLIKSHSD 58

Query: 153 SSVRSERQ-AYTELSLANLTS-GSTEADSRW 67
           SS+R   Q + TELSLAN TS  + EA+S W
Sbjct: 59  SSIRVGSQISDTELSLANPTSTAALEAESPW 89


>ref|XP_002528498.1| transcription factor, putative [Ricinus communis]
           gi|223532058|gb|EEF33867.1| transcription factor,
           putative [Ricinus communis]
          Length = 441

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
 Frame = -1

Query: 333 MPLEGMFIDPCSSMPAPDLSLHISPPNSAPSSFCNSN-----NGNDAAGFDVWKRGDGTI 169
           MPLEG+FI+P SS P PDLSLHISPPN++ SS CN++     +  D  GF++  R +G  
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNTSSSSVCNNSIINNKSTTDTTGFNLLSRQEGIH 59

Query: 168 KCNSDSSVRSERQAYTELSLANLTSGSTEADSRWIR 61
              S +S+R + QAYTELSLA+  + +   D   IR
Sbjct: 60  NLKS-NSMRIDSQAYTELSLAHPATTNVVDDETRIR 94


>emb|CBI28638.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
 Frame = -1

Query: 333 MPLEGMFIDPCSSMPAPDLSLHISPPN--SAPSSFCNSNNGNDAAGFDVWKRGDGTIKCN 160
           MPLEG+FI+P SS P PDLSLHISPPN  S+P+S CN ++    +  ++  +    +K +
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNNTSSPTSICNISSNEGGSNTNLLGQCQ-ALKSD 58

Query: 159 SDSSVRSERQAYTELSLANLTSGSTEADSRWIRS 58
           S++SVRS  QAYTELSLA+  +   E D R  R+
Sbjct: 59  SNTSVRSNLQAYTELSLAHAANVMDE-DGRCSRN 91


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