BLASTX nr result

ID: Coptis21_contig00011410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011410
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO66661.1| AMT1;2 [Citrus trifoliata]                             201   7e-50
ref|XP_003590177.1| Ammonium transporter 1 member [Medicago trun...   199   2e-49
ref|XP_002301837.1| ammonium transporter [Populus trichocarpa] g...   197   8e-49
ref|XP_004165457.1| PREDICTED: LOW QUALITY PROTEIN: ammonium tra...   196   2e-48
gb|AFK45185.1| unknown [Medicago truncatula]                          196   2e-48

>gb|AFO66661.1| AMT1;2 [Citrus trifoliata]
          Length = 505

 Score =  201 bits (510), Expect = 7e-50
 Identities = 97/123 (78%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = -3

Query: 370 HFFGLRDIPAPNFDYSFFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSSFLTGFVYPVV 191
           HFFGLRD+P+P  DYSFFLYQW              AERTQFVAYLIYSSFLTGFVYP+V
Sbjct: 116 HFFGLRDVPSPLTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIV 175

Query: 190 SHWFWSVDGWASPNRA-NLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTG 14
           SHWFWS DGWASP R  NLLFGSGVIDFAGSGVVH+VGGIAGLWGALIEGPRIGRFD +G
Sbjct: 176 SHWFWSSDGWASPTRPDNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDQSG 235

Query: 13  RSV 5
           RSV
Sbjct: 236 RSV 238


>ref|XP_003590177.1| Ammonium transporter 1 member [Medicago truncatula]
           gi|355479225|gb|AES60428.1| Ammonium transporter 1
           member [Medicago truncatula]
          Length = 503

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/123 (77%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = -3

Query: 370 HFFGLRDIPAPNFDYSFFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSSFLTGFVYPVV 191
           HFFGL+D+P  NFDYS+FLYQW              AERTQFVAYLIYSSFLTGFVYPVV
Sbjct: 117 HFFGLKDVPTANFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 176

Query: 190 SHWFWSVDGWAS-PNRANLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTG 14
           SHWFWS DGWAS  N  NLLFG+GVIDFAGSGVVH+VGGIAGLWGALIEGPRIGRFDH+G
Sbjct: 177 SHWFWSGDGWASATNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSG 236

Query: 13  RSV 5
           R+V
Sbjct: 237 RAV 239


>ref|XP_002301837.1| ammonium transporter [Populus trichocarpa]
           gi|222843563|gb|EEE81110.1| ammonium transporter
           [Populus trichocarpa]
          Length = 489

 Score =  197 bits (501), Expect = 8e-49
 Identities = 93/124 (75%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = -3

Query: 370 HFFGLRDIPAPNFDYSFFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSSFLTGFVYPVV 191
           HFFGL   P+P+FDY +FLYQW              AERTQFVAYL+YSSFLTG VYP+V
Sbjct: 118 HFFGLSKFPSPSFDYGYFLYQWAFAIAVAGITSGSIAERTQFVAYLVYSSFLTGLVYPIV 177

Query: 190 SHWFWSVDGWASPNRA-NLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTG 14
           SHWFWS DGWASP RA NLLFGSGVIDFAGSGVVHLVG +AGLWGALIEGPRIGRFDH G
Sbjct: 178 SHWFWSADGWASPARAENLLFGSGVIDFAGSGVVHLVGAVAGLWGALIEGPRIGRFDHAG 237

Query: 13  RSVT 2
           R+VT
Sbjct: 238 RAVT 241


>ref|XP_004165457.1| PREDICTED: LOW QUALITY PROTEIN: ammonium transporter 1 member
           2-like [Cucumis sativus]
          Length = 511

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/123 (76%), Positives = 99/123 (80%), Gaps = 1/123 (0%)
 Frame = -3

Query: 370 HFFGLRDIPAPNFDYSFFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSSFLTGFVYPVV 191
           HFFGL D P PN+DYSFFLYQW              AERTQFVAYLIYSS LTGFVYP+V
Sbjct: 118 HFFGLSDFPNPNYDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSILTGFVYPIV 177

Query: 190 SHWFWSVDGWASPNR-ANLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTG 14
           SHWFWS DGWASP R +NLLF SG IDFAGSGVVH+VGGIAGLWGALIEGPRIGRFD +G
Sbjct: 178 SHWFWSSDGWASPTRPSNLLFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSG 237

Query: 13  RSV 5
           RSV
Sbjct: 238 RSV 240


>gb|AFK45185.1| unknown [Medicago truncatula]
          Length = 275

 Score =  196 bits (498), Expect = 2e-48
 Identities = 93/123 (75%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
 Frame = -3

Query: 370 HFFGLRDIPAPNFDYSFFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSSFLTGFVYPVV 191
           HFFGL+D+P  NFDYS+FLYQW              AERTQFVAYLIYSSFLTGFVYPVV
Sbjct: 117 HFFGLKDVPTANFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 176

Query: 190 SHWFWSVDGWAS-PNRANLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTG 14
           SHWFWS DGWAS  N  NLLFG+ VIDFAGSGVVH++GGIAGLWGALIEGPRIGRFDH+G
Sbjct: 177 SHWFWSGDGWASATNTGNLLFGTRVIDFAGSGVVHMIGGIAGLWGALIEGPRIGRFDHSG 236

Query: 13  RSV 5
           R+V
Sbjct: 237 RAV 239


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