BLASTX nr result

ID: Coptis21_contig00011409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011409
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO66661.1| AMT1;2 [Citrus trifoliata]                             155   2e-36
ref|XP_002301837.1| ammonium transporter [Populus trichocarpa] g...   154   6e-36
ref|XP_003590177.1| Ammonium transporter 1 member [Medicago trun...   154   9e-36
sp|P58905.1|AMT11_SOLLC RecName: Full=Ammonium transporter 1 mem...   153   1e-35
ref|XP_003590924.1| Ammonium transporter [Medicago truncatula] g...   151   5e-35

>gb|AFO66661.1| AMT1;2 [Citrus trifoliata]
          Length = 505

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/123 (63%), Positives = 84/123 (68%)
 Frame = -3

Query: 373 HFFGLRDIPAPNFDYSNFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSAFLTGFVYPVV 194
           HFFGLRD+P+P  DYS FLYQW              AERTQFVAYLIYS+FLTGFVYP+V
Sbjct: 116 HFFGLRDVPSPLTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIV 175

Query: 193 SHWFWSVDGWASPTRATDLLFGSGVIDFXXXXXXXXXXXXXXXXXXLIEGPRIGRFDHTG 14
           SHWFWS DGWASPTR  +LLFGSGVIDF                  LIEGPRIGRFD +G
Sbjct: 176 SHWFWSSDGWASPTRPDNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDQSG 235

Query: 13  RSV 5
           RSV
Sbjct: 236 RSV 238


>ref|XP_002301837.1| ammonium transporter [Populus trichocarpa]
           gi|222843563|gb|EEE81110.1| ammonium transporter
           [Populus trichocarpa]
          Length = 489

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/124 (60%), Positives = 82/124 (66%)
 Frame = -3

Query: 373 HFFGLRDIPAPNFDYSNFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSAFLTGFVYPVV 194
           HFFGL   P+P+FDY  FLYQW              AERTQFVAYL+YS+FLTG VYP+V
Sbjct: 118 HFFGLSKFPSPSFDYGYFLYQWAFAIAVAGITSGSIAERTQFVAYLVYSSFLTGLVYPIV 177

Query: 193 SHWFWSVDGWASPTRATDLLFGSGVIDFXXXXXXXXXXXXXXXXXXLIEGPRIGRFDHTG 14
           SHWFWS DGWASP RA +LLFGSGVIDF                  LIEGPRIGRFDH G
Sbjct: 178 SHWFWSADGWASPARAENLLFGSGVIDFAGSGVVHLVGAVAGLWGALIEGPRIGRFDHAG 237

Query: 13  RSVT 2
           R+VT
Sbjct: 238 RAVT 241


>ref|XP_003590177.1| Ammonium transporter 1 member [Medicago truncatula]
           gi|355479225|gb|AES60428.1| Ammonium transporter 1
           member [Medicago truncatula]
          Length = 503

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/123 (61%), Positives = 83/123 (67%)
 Frame = -3

Query: 373 HFFGLRDIPAPNFDYSNFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSAFLTGFVYPVV 194
           HFFGL+D+P  NFDYS FLYQW              AERTQFVAYLIYS+FLTGFVYPVV
Sbjct: 117 HFFGLKDVPTANFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 176

Query: 193 SHWFWSVDGWASPTRATDLLFGSGVIDFXXXXXXXXXXXXXXXXXXLIEGPRIGRFDHTG 14
           SHWFWS DGWAS T   +LLFG+GVIDF                  LIEGPRIGRFDH+G
Sbjct: 177 SHWFWSGDGWASATNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSG 236

Query: 13  RSV 5
           R+V
Sbjct: 237 RAV 239


>sp|P58905.1|AMT11_SOLLC RecName: Full=Ammonium transporter 1 member 1; AltName:
           Full=LeAMT1;1
          Length = 488

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/123 (62%), Positives = 86/123 (69%)
 Frame = -3

Query: 373 HFFGLRDIPAPNFDYSNFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSAFLTGFVYPVV 194
           HFFGL++IP+ +FDY NFLYQW              AERTQFVAYLIYS+FLTGFVYPVV
Sbjct: 112 HFFGLKEIPSNSFDYMNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 171

Query: 193 SHWFWSVDGWASPTRATDLLFGSGVIDFXXXXXXXXXXXXXXXXXXLIEGPRIGRFDHTG 14
           SHWFW+ DGWASPT  ++LLFGSGVIDF                  LIEGPRIGR+DHTG
Sbjct: 172 SHWFWTPDGWASPTN-SNLLFGSGVIDFAGSGVVHMVGGIAGFYGALIEGPRIGRYDHTG 230

Query: 13  RSV 5
           RSV
Sbjct: 231 RSV 233


>ref|XP_003590924.1| Ammonium transporter [Medicago truncatula]
           gi|355479972|gb|AES61175.1| Ammonium transporter
           [Medicago truncatula]
          Length = 824

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/124 (62%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
 Frame = -3

Query: 373 HFFGLRDIPAPNFDYSNFLYQWXXXXXXXXXXXXXXAERTQFVAYLIYSAFLTGFVYPVV 194
           HFFGLRD P+P+ DYS FLYQW              AERTQFVAYLIYS+FLTGFVYP+V
Sbjct: 421 HFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIV 480

Query: 193 SHWFWSVDGWASPTRAT-DLLFGSGVIDFXXXXXXXXXXXXXXXXXXLIEGPRIGRFDHT 17
           SHW WS DGWASPTR   D+LFGSGVIDF                   IEGPRIGRFD T
Sbjct: 481 SHWVWSADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRT 540

Query: 16  GRSV 5
           GRSV
Sbjct: 541 GRSV 544


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