BLASTX nr result

ID: Coptis21_contig00011395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011395
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kD...   158   9e-37
ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|2...   158   9e-37
gb|ABK93883.1| unknown [Populus trichocarpa]                          158   9e-37
gb|AFK37103.1| unknown [Lotus japonicus]                              158   1e-36
ref|NP_001235838.1| uncharacterized protein LOC100526909 [Glycin...   155   1e-35

>ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449474535|ref|XP_004154207.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449506299|ref|XP_004162708.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus]
          Length = 118

 Score =  158 bits (400), Expect = 9e-37
 Identities = 79/93 (84%), Positives = 85/93 (91%)
 Frame = +1

Query: 91  MVLLQPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKVVRNKMTTEGESIEYRCLIRAT 270
           MVLLQ DPFLNELTSM+ER+TEKGSVWVT KRSS+KSKV RNKMTT G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 271 DGKKTISTSVSAKDHQRFQASYATVLKAHMHAL 369
           DGKKTISTSV AKDH RFQASY+T+LKAHM AL
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTAL 93


>ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|222872264|gb|EEF09395.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  158 bits (400), Expect = 9e-37
 Identities = 77/93 (82%), Positives = 85/93 (91%)
 Frame = +1

Query: 91  MVLLQPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKVVRNKMTTEGESIEYRCLIRAT 270
           MVLLQ DPFLNELT++Y+ +T+KGS+WVT KRSSMKSKV RNKMTT GE IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRAT 60

Query: 271 DGKKTISTSVSAKDHQRFQASYATVLKAHMHAL 369
           DGKKTISTSV A+DHQRFQASYAT+LKAHM AL
Sbjct: 61  DGKKTISTSVGARDHQRFQASYATILKAHMTAL 93


>gb|ABK93883.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  158 bits (400), Expect = 9e-37
 Identities = 77/93 (82%), Positives = 85/93 (91%)
 Frame = +1

Query: 91  MVLLQPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKVVRNKMTTEGESIEYRCLIRAT 270
           MVLLQ DPFLNELT++Y+ +T+KGS+WVT KRSSMKSKV RNKMTT GE IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRAT 60

Query: 271 DGKKTISTSVSAKDHQRFQASYATVLKAHMHAL 369
           DGKKTISTSV A+DHQRFQASYAT+LKAHM AL
Sbjct: 61  DGKKTISTSVGARDHQRFQASYATILKAHMTAL 93


>gb|AFK37103.1| unknown [Lotus japonicus]
          Length = 123

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/93 (83%), Positives = 85/93 (91%)
 Frame = +1

Query: 91  MVLLQPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKVVRNKMTTEGESIEYRCLIRAT 270
           MVLLQ DPFLNELTS++ER+TEKGSVWVT KRSS+KSKV RNK+ T GE+IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRAT 60

Query: 271 DGKKTISTSVSAKDHQRFQASYATVLKAHMHAL 369
           DGKKTISTSV  KDHQRFQASYAT+LKAHM AL
Sbjct: 61  DGKKTISTSVGPKDHQRFQASYATILKAHMTAL 93


>ref|NP_001235838.1| uncharacterized protein LOC100526909 [Glycine max]
           gi|255631129|gb|ACU15930.1| unknown [Glycine max]
          Length = 120

 Score =  155 bits (391), Expect = 1e-35
 Identities = 77/93 (82%), Positives = 84/93 (90%)
 Frame = +1

Query: 91  MVLLQPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKVVRNKMTTEGESIEYRCLIRAT 270
           MVLLQ DPFLNELTSM+ER+T+ GSVWVT KRSS+KSKV RNK+ T GE+IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTKLGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRAT 60

Query: 271 DGKKTISTSVSAKDHQRFQASYATVLKAHMHAL 369
           DGKKTISTSV  KDHQRFQASYAT+LKAHM AL
Sbjct: 61  DGKKTISTSVGPKDHQRFQASYATILKAHMTAL 93


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