BLASTX nr result
ID: Coptis21_contig00011385
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011385 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252... 79 4e-13 ref|NP_001189736.1| uncharacterized protein [Arabidopsis thalian... 77 2e-12 ref|NP_565984.1| uncharacterized protein [Arabidopsis thaliana] ... 77 2e-12 ref|XP_002525894.1| Protein pof4, putative [Ricinus communis] gi... 74 1e-11 ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966... 73 2e-11 >ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera] gi|302143487|emb|CBI22048.3| unnamed protein product [Vitis vinifera] Length = 223 Score = 79.0 bits (193), Expect = 4e-13 Identities = 36/55 (65%), Positives = 46/55 (83%) Frame = -3 Query: 166 MYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2 M K+K PSLV LC++TAIDNVRYLG++G+TDI+LL+ IL HCT+DQL IE T+ Sbjct: 4 MVKRKVPSLVDLCIRTAIDNVRYLGDVGETDINLLDHILPHCTVDQLMHIEKCTE 58 >ref|NP_001189736.1| uncharacterized protein [Arabidopsis thaliana] gi|330255074|gb|AEC10168.1| uncharacterized protein [Arabidopsis thaliana] Length = 253 Score = 76.6 bits (187), Expect = 2e-12 Identities = 35/51 (68%), Positives = 41/51 (80%) Frame = -3 Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDST 5 KKPPSLV LCV+ AIDNV+Y+G +G D LLE IL HCTL+QLK IED+T Sbjct: 8 KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDAT 58 >ref|NP_565984.1| uncharacterized protein [Arabidopsis thaliana] gi|13877589|gb|AAK43872.1|AF370495_1 Unknown protein [Arabidopsis thaliana] gi|16226328|gb|AAL16136.1|AF428304_1 At2g42780/F7D19.22 [Arabidopsis thaliana] gi|20148709|gb|AAM10245.1| unknown protein [Arabidopsis thaliana] gi|20197958|gb|AAD21730.2| expressed protein [Arabidopsis thaliana] gi|21536847|gb|AAM61179.1| unknown [Arabidopsis thaliana] gi|330255073|gb|AEC10167.1| uncharacterized protein [Arabidopsis thaliana] Length = 293 Score = 76.6 bits (187), Expect = 2e-12 Identities = 35/51 (68%), Positives = 41/51 (80%) Frame = -3 Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDST 5 KKPPSLV LCV+ AIDNV+Y+G +G D LLE IL HCTL+QLK IED+T Sbjct: 8 KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDAT 58 >ref|XP_002525894.1| Protein pof4, putative [Ricinus communis] gi|223534808|gb|EEF36498.1| Protein pof4, putative [Ricinus communis] Length = 195 Score = 73.9 bits (180), Expect = 1e-11 Identities = 33/56 (58%), Positives = 44/56 (78%) Frame = -3 Query: 169 SMYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2 S+ ++K PSLV LCV AI +VRYLG++G+TD+ LL+ IL HCT+DQL +E STQ Sbjct: 10 SLIERKAPSLVDLCVSVAISHVRYLGDVGETDLHLLDQILPHCTMDQLMHVEKSTQ 65 >ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1| Elongin-A [Medicago truncatula] Length = 232 Score = 73.2 bits (178), Expect = 2e-11 Identities = 35/52 (67%), Positives = 41/52 (78%) Frame = -3 Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2 +K PSLV LCVQTAIDN+RYLGN+G D LLE IL HCTLDQL IE +++ Sbjct: 10 RKTPSLVDLCVQTAIDNLRYLGNVGPVDHHLLERILPHCTLDQLTHIEKASE 61