BLASTX nr result

ID: Coptis21_contig00011385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011385
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252...    79   4e-13
ref|NP_001189736.1| uncharacterized protein [Arabidopsis thalian...    77   2e-12
ref|NP_565984.1| uncharacterized protein [Arabidopsis thaliana] ...    77   2e-12
ref|XP_002525894.1| Protein pof4, putative [Ricinus communis] gi...    74   1e-11
ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966...    73   2e-11

>ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera]
           gi|302143487|emb|CBI22048.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = -3

Query: 166 MYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2
           M K+K PSLV LC++TAIDNVRYLG++G+TDI+LL+ IL HCT+DQL  IE  T+
Sbjct: 4   MVKRKVPSLVDLCIRTAIDNVRYLGDVGETDINLLDHILPHCTVDQLMHIEKCTE 58


>ref|NP_001189736.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330255074|gb|AEC10168.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 253

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -3

Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDST 5
           KKPPSLV LCV+ AIDNV+Y+G +G  D  LLE IL HCTL+QLK IED+T
Sbjct: 8   KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDAT 58


>ref|NP_565984.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13877589|gb|AAK43872.1|AF370495_1 Unknown protein
           [Arabidopsis thaliana]
           gi|16226328|gb|AAL16136.1|AF428304_1 At2g42780/F7D19.22
           [Arabidopsis thaliana] gi|20148709|gb|AAM10245.1|
           unknown protein [Arabidopsis thaliana]
           gi|20197958|gb|AAD21730.2| expressed protein
           [Arabidopsis thaliana] gi|21536847|gb|AAM61179.1|
           unknown [Arabidopsis thaliana]
           gi|330255073|gb|AEC10167.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 293

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -3

Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDST 5
           KKPPSLV LCV+ AIDNV+Y+G +G  D  LLE IL HCTL+QLK IED+T
Sbjct: 8   KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDAT 58


>ref|XP_002525894.1| Protein pof4, putative [Ricinus communis]
           gi|223534808|gb|EEF36498.1| Protein pof4, putative
           [Ricinus communis]
          Length = 195

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = -3

Query: 169 SMYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2
           S+ ++K PSLV LCV  AI +VRYLG++G+TD+ LL+ IL HCT+DQL  +E STQ
Sbjct: 10  SLIERKAPSLVDLCVSVAISHVRYLGDVGETDLHLLDQILPHCTMDQLMHVEKSTQ 65


>ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1|
           Elongin-A [Medicago truncatula]
          Length = 232

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = -3

Query: 157 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQ 2
           +K PSLV LCVQTAIDN+RYLGN+G  D  LLE IL HCTLDQL  IE +++
Sbjct: 10  RKTPSLVDLCVQTAIDNLRYLGNVGPVDHHLLERILPHCTLDQLTHIEKASE 61


Top