BLASTX nr result

ID: Coptis21_contig00011376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011376
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus...   109   3e-22
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   102   4e-20
ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V...   102   4e-20
ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [G...   101   7e-20
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   100   9e-20

>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
           gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 530

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/93 (60%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = -3

Query: 278 NKSLDSFKKK--KQQQPSLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRA 105
           N S+   KKK  K QQ SL  SL  +E+E+K V+N LGLL P TY+E+LQQLK+KAL RA
Sbjct: 395 NSSISMLKKKLQKPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRA 454

Query: 104 GLTEDNVLSLIEERVQARKNREYAKSDQIRLDL 6
           G+TED+VL  IEER QARKN+E+++SDQ+R +L
Sbjct: 455 GVTEDDVLRSIEERAQARKNKEFSRSDQVRANL 487


>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
           gi|449508099|ref|XP_004163218.1| PREDICTED:
           cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 562

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/94 (56%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
 Frame = -3

Query: 278 NKSLDSFKKK--KQQQPSLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRA 105
           N +L S KKK  K+QQ S+  SL+ ++KE++ V++ LGLL  +TYSEVLQQLK+KAL RA
Sbjct: 395 NSTLTSLKKKQPKKQQLSMIQSLVNVKKELREVLDVLGLLSTSTYSEVLQQLKDKALKRA 454

Query: 104 GLTEDNVLSLIEERVQARKNREYAKSDQIRLDLT 3
           G+ ED++L LIEER QARK++ + KSD IR  L+
Sbjct: 455 GMVEDDILHLIEERTQARKDKNFGKSDNIRAKLS 488


>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|296087508|emb|CBI34097.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
 Frame = -3

Query: 278 NKSLDSFKKK--KQQQPSLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRA 105
           N  L+  KKK  KQQQ S   SL  LEKEVK V++ LGLL    YSEVLQQLK KAL RA
Sbjct: 388 NSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRA 447

Query: 104 GLTEDNVLSLIEERVQARKNREYAKSDQIRLDL 6
           G+ ED+VL LIEER  ARKN+ +++ DQIR DL
Sbjct: 448 GMIEDDVLHLIEERALARKNKNFSRGDQIRADL 480


>ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
          Length = 553

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = -3

Query: 278 NKSLDSFKKKKQQ--QPSLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRA 105
           N SL   KKK Q+  Q  L  SL+ +EKEV  V++ LGLL   +Y+EVL QLK+KALNRA
Sbjct: 393 NTSLKMLKKKMQKRAQLQLIQSLLEVEKEVGKVLDVLGLLSSKSYAEVLHQLKDKALNRA 452

Query: 104 GLTEDNVLSLIEERVQARKNREYAKSDQIRLDL 6
           GLTED VL LIEER QAR N+++AKSD++R DL
Sbjct: 453 GLTEDEVLHLIEERTQARINKDFAKSDKMRADL 485


>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|297735988|emb|CBI23962.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
 Frame = -3

Query: 278 NKSLDSFKKK--KQQQPSLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRA 105
           N  L+  KKK  KQQQ S   SL  L KEVK V++ LGLL    YSEVLQQLK KAL RA
Sbjct: 388 NSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRA 447

Query: 104 GLTEDNVLSLIEERVQARKNREYAKSDQIRLDL 6
           G+ ED+VL LIEER  ARKN++++K DQIR DL
Sbjct: 448 GMIEDDVLHLIEERALARKNKDFSKGDQIRADL 480


Top