BLASTX nr result

ID: Coptis21_contig00011361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011361
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    92   2e-16
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    90   5e-16
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    90   6e-16
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    90   6e-16
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    89   8e-16

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 65/251 (25%), Positives = 98/251 (39%), Gaps = 20/251 (7%)
 Frame = +1

Query: 1   VDIWRDNWIGQKSLKEALALTEQELHDCNSKVSTLVNNGIIELPENFQELIDAAGLDTSN 180
           +  W D W G+  L E L + +    +    V   + N    +P+       A  L    
Sbjct: 14  IKFWEDAWCGEP-LHETLNVNQDIYREYPQFVHDYIQNFRWHIPQTILVHYPALKLLAEK 72

Query: 181 ILKGRDTDEDTLFWCPELKGCFTVASAYQEIRSKRVEVSWSKCIWNTYTHPRTSALAWKL 360
           +    +  ED L W     G   +  +Y          +W+K IW+    P  S L W+L
Sbjct: 73  VTIPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPSKSILTWRL 132

Query: 361 CQKGVPVDEGTKRRGIHLASCCRLCNKNEETLNHLLWDCSFSGKIWRWLRQKFKMRGTFN 540
               VP DE  ++RG  L S C LC  + ET  HL ++C F+ +IW W          F 
Sbjct: 133 IHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIWCWFASVLDSSLHFQ 192

Query: 541 SLDDALKLSRHSSSFITQLWNTA-IVSTMTIIWKHRNKI-------------------VF 660
           S+ D   +     S   ++ N A IV+ ++ IW +RN+                    VF
Sbjct: 193 SIPDIWSVCDRGWSPQCKVVNQATIVNIISTIWYNRNQRWIKFNTDGASTATSSSCGGVF 252

Query: 661 EDKKPNLSKCF 693
            D+  N   CF
Sbjct: 253 RDQNANFLSCF 263


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
 Frame = +1

Query: 7    IWRDNWIGQKSLKEALALTEQELHDC----NSKVSTLVNNGIIELPEN----FQELIDAA 162
            +W DNW     L ++    E+ ++D     N+KV+ L+ N   + P      +  +I+A 
Sbjct: 776  LWFDNWHPHSPLADSYG--ERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAI 833

Query: 163  GLDTSNILKGRDTDEDTLFWCPELKGCFTVASAYQEIRSKRVEVSWSKCIWNTYTHPRTS 342
                SN   G+   +D + W       F+V  A++++R  R  V W   +W     PR S
Sbjct: 834  P-SNSNPKMGQ---KDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHS 889

Query: 343  ALAWKLCQKGVPVDEGTKRRGIHLASCCRLCNKNEETLNHLLWDCSFSGKIWRWLRQKFK 522
             L W + Q+ +   +   R GIH  + C LC +N E  NHL ++CS++  IW  +  +  
Sbjct: 890  FLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCD 949

Query: 523  MRGTFNSLDDALK---LSRHSSSFITQLWNTAIVSTMTIIWKHRNKIVFEDKKPNLSKCF 693
            +       D+ ++   +S H  SFI      +  +T+  +W+ RN  +F       +  F
Sbjct: 950  IPRMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVF 1009

Query: 694  QQI 702
             QI
Sbjct: 1010 NQI 1012


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
 Frame = +1

Query: 91  KVSTLVNNGIIELPENFQELIDAAGLDTSNILKGRDTDEDTLFWCPELKGCFTVASAYQE 270
           KV+  + NG   L + F    +A       I    D   D L W   + G  +   A+  
Sbjct: 2   KVANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSF 61

Query: 271 IRSKRVEVSWSKCIWNTYTHPRTSALAWKLCQKGVPVDEGTKRRGIHLAS-CCRLCNKNE 447
           +      V W+K +WN YT P  + + W+     +P D+  ++RG ++ S CC  C K  
Sbjct: 62  LPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQA 121

Query: 448 ETLNHLLWDCSFSGKIWRWLRQKFKMRGTFNSLDDALKLSRHSSSFITQLWNTAIVSTMT 627
           ET +H+   C  + ++W WL +       F+S+   L +SR     +  + N+AIV  M 
Sbjct: 122 ETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSI---LNISR----MVQHVMNSAIVHIMW 174

Query: 628 IIWKHRNKIVFEDKKPNLSKCFQQIRSHIFCTSHL 732
            IW   N   F+  +  +S  F  I + +   S +
Sbjct: 175 SIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFM 209


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
 Frame = +1

Query: 7   IWRDNWIGQKSLKEALALTEQELHDC----NSKVSTLVNNGIIELPEN----FQELIDAA 162
           +W DNW     L ++    E+ ++D     N+KV+ L+ N   + P      +  +I+A 
Sbjct: 243 LWFDNWHPHSPLADSYG--ERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAI 300

Query: 163 GLDTSNILKGRDTDEDTLFWCPELKGCFTVASAYQEIRSKRVEVSWSKCIWNTYTHPRTS 342
               SN   G+   +D L W       F+V  A++++R  R  V W   +W     PR S
Sbjct: 301 P-SNSNPKMGQ---KDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHS 356

Query: 343 ALAWKLCQKGVPVDEGTKRRGIHLASCCRLCNKNEETLNHLLWDCSFSGKIWRWLRQKFK 522
            L W   Q+ +   +   R GIH  + C LC +N E  NHL ++CS++  IW  +  +  
Sbjct: 357 FLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCD 416

Query: 523 MRGTFNSLDDALK---LSRHSSSFITQLWNTAIVSTMTIIWKHRNKIVFE--DKKPNL 681
           +       D+ ++   +S H  SF+      +  +T+  +W+ RN  +F    + PNL
Sbjct: 417 IPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRTPNL 474


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
 Frame = +1

Query: 238 GCFTVASAYQEIRSKRVEVSWSKCIWNTYTHPRTSALAWKLCQKGVPVDEGTKRRGIHLA 417
           G  T   AY+ I      V W K +WN+Y  P  S + W+L    +P DE  ++RG  + 
Sbjct: 16  GDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIV 75

Query: 418 SCCRLCNKNEETLNHLLWDCSFSGKIWRWL-RQKFKMRGTFNSLDDALKLSRHSSSFITQ 594
           S C  C K+ E+  H+ ++C  + ++W WL +   K+    + L   ++     S  +  
Sbjct: 76  SICCFCMKSAESSQHIFFECHVTSRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNN 135

Query: 595 LWNTAIVSTMTIIWKHRNKIVFEDKKPNLSKCFQQIRSHI 714
           + N+AI+ T+  IW  RN+  F +K   ++  F  I + +
Sbjct: 136 ILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEV 175


Top