BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011355
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm...   127   5e-27
emb|CBI40164.3| unnamed protein product [Vitis vinifera]              126   8e-27
dbj|BAF36714.1| S locus F-box protein with the low allelic seque...   122   2e-25
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...   121   3e-25
dbj|BAC66627.1| F-box [Prunus mume]                                   120   8e-25

>ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis]
            gi|223547942|gb|EEF49434.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 386

 Score =  127 bits (319), Expect = 5e-27
 Identities = 91/277 (32%), Positives = 142/277 (51%), Gaps = 30/277 (10%)
 Frame = +3

Query: 276  LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKD----NNDDHQLII 443
            LPED++  ILL LP+  L+RF+ VCKSWC+L+    FI + L    +    +N  H +++
Sbjct: 5    LPEDLIIKILLRLPMLYLVRFRCVCKSWCALLSDPKFIYKKLLCNGEHQNYDNSPHPVVV 64

Query: 444  LDPSQCDDTTCYSLRFSLLSGSNYKVPKVLDLPHHFD---NALESPKIIASCNGIICLR- 611
                +  D +  +  FS+LS   +++    ++P+  D   N  +   + +S NG ICLR 
Sbjct: 65   ----KRRDMSTRNYFFSVLSCETFEMSAPKEIPYPKDIMENMSDISIVGSSSNGFICLRD 120

Query: 612  ---PDL-----------SQNVSLWNPALREFRILPK--PSVPPEELVPGSRLDFYFGFGY 743
               PD+             NV LWNP   E +I+P+   S PP  +    +L     FG+
Sbjct: 121  LYDPDIVLSRWRYSYETDCNVILWNPLTSEIKIIPQSNASRPPNTVHSSLQL---VEFGF 177

Query: 744  DAKTNDYKVVKVIALNLMTCR----VELYSLSTDSWRPIDTVVPF--PHVYSHPNPPLRN 905
            D KTNDYK++K+  +     +    VE+YSL  +SWR +D VVPF         +    N
Sbjct: 178  DRKTNDYKILKMFLVYPNDLQGDYFVEIYSLRNESWRTVDVVVPFMLSCFDDRCHYTGAN 237

Query: 906  GIYCWLGNVYDEDESERHAILSFDFTTEVFKTMTVPD 1016
            G + W    + +   ++H I+SFD + E+FKT  +PD
Sbjct: 238  GQFHW----WTKGGGDQHKIVSFDLSDEIFKTSPLPD 270


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  126 bits (317), Expect = 8e-27
 Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 9/269 (3%)
 Frame = +3

Query: 252  VMENSRA--VLPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNND 425
            +++NS +   L E+++  I L LPV S++RF+ VCKSWC+L +   FI+ HL     N++
Sbjct: 11   MLDNSMSGNFLSENLI-DIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSN 69

Query: 426  DHQLIILDPSQCDDTTCYSLRFSLLSGSNYKVPKVLDLPHHFDNALESPKIIASCNGIIC 605
                ++       +   YSLR      SN    +V  L     +  +  +I+ S NG+IC
Sbjct: 70   GR--LLFKHLSSSEQEIYSLR------SNIAFAEVRRLEVPVPSKTDYYQIVGSSNGLIC 121

Query: 606  LRPD------LSQNVSLWNPALREFRILPKPSVPPEELVPGSRLDFYFGFGYDAKTNDYK 767
            L         LS N+ LWNPA+REF+ LPK  +          +    GF +    NDYK
Sbjct: 122  LTESNFKGSYLSLNLFLWNPAIREFQTLPKYHI---NNFTSPLMVVGLGFAFHPVINDYK 178

Query: 768  VVKVI-ALNLMTCRVELYSLSTDSWRPIDTVVPFPHVYSHPNPPLRNGIYCWLGNVYDED 944
            VV+++  +   T   ++YSL T SWR +D  +   +++S+ +    NG   WL    +E 
Sbjct: 179  VVRIVYFMRNKTSEADVYSLRTGSWRKVDANI-CCYIHSNVSRTFINGALHWLAGKKNEM 237

Query: 945  ESERHAILSFDFTTEVFKTMTVPDVYGVD 1031
            ++  + ILSFD   +VFK + +PD +G D
Sbjct: 238  DNTDNLILSFDMAKDVFKEIMLPD-FGYD 265


>dbj|BAF36714.1| S locus F-box protein with the low allelic sequence polymorphism 2-S4
            [Prunus avium]
          Length = 424

 Score =  122 bits (306), Expect = 2e-25
 Identities = 99/317 (31%), Positives = 148/317 (46%), Gaps = 48/317 (15%)
 Frame = +3

Query: 282  EDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIL----- 446
            ED++  IL  LP  SL+RF+ V KSW  LI+   F+ QHL+T  DN       +L     
Sbjct: 9    EDMMGNILSRLPPKSLMRFRCVLKSWHDLIDKPSFVDQHLSTSMDNKVTSSTYVLLKHNV 68

Query: 447  --DPSQCDDTTCY---------SLRFSLLSGSNY--KVPKVLDLPHH-----FDNALESP 572
              DPS  DD               R  LLS  N    V   L++ +H           S 
Sbjct: 69   LTDPSIKDDEKAVRATLFNPDSDQRDILLSSINLGSLVDDGLEIENHVVPPPMRGYALSL 128

Query: 573  KIIASCNGIICLRPDLSQNVSLWNPALREFRILPK-----PSVPPEELVPGSRLDFY--- 728
            +I  SC+G+ICL    S+++ L NPAL E+R+LPK     P   P ++      D+Y   
Sbjct: 129  EIAGSCDGLICLNTFNSEDIVLCNPALEEYRVLPKSCILLPPRVPRQVEENEDDDYYEED 188

Query: 729  -----------FGFGYDAKTNDYKVVKVI-----ALNLMTCRVELYSLSTDSWRPIDTVV 860
                        GFGYD  + DYKVV+              +VE+YSL+ D+WR I   +
Sbjct: 189  DDDEIESNPKCVGFGYDPNSKDYKVVRAAQFVSGVFTQHPSKVEVYSLAADTWREIPVDI 248

Query: 861  PFPHVYSHPNPPLR-NGIYCWLGNVYDEDESERHAILSFDFTTEVFKTMTVPDVYGVDST 1037
              PH   +P+  +   G + W+    +    ER+ ILSFD + EVF  + +P+  G D+ 
Sbjct: 249  Q-PHGSLNPSYQMYFKGFFYWIAYWTE----ERNVILSFDMSEEVFHGIALPE-SGPDAY 302

Query: 1038 AYLRLALLRENIACIEW 1088
             Y  +A+ ++++  + +
Sbjct: 303  EYTSIAVWKDSLVLLTY 319


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
            gi|223534840|gb|EEF36529.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 371

 Score =  121 bits (304), Expect = 3e-25
 Identities = 92/286 (32%), Positives = 145/286 (50%), Gaps = 16/286 (5%)
 Frame = +3

Query: 276  LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHL-ATLKDNNDDHQLIILDP 452
            +P++++  IL  LPV SLL+++ VC+SW SLI +S FI+ H+  +++ NN  H   ++  
Sbjct: 5    IPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVKQ 64

Query: 453  SQCDDTTCYSLRFSLL----SGSN-YKVPKVLDLPHHFDNALESPKIIASCNGIICLRPD 617
                D      RF L     SG   ++V + LD P   +  LE   II+SCNG++CL   
Sbjct: 65   KSVPDC---KERFILYIDDDSGDEPFRVYQELDFPFKGERYLE---IISSCNGLVCLSDS 118

Query: 618  LSQNVSLWNPALRE-FRILPKPSVPPEELVPGSRLDFYFGFGYDAKTNDYKVVKVI---- 782
                  LWNP +R+   IL   S             F  GFG++ K NDYKVVK++    
Sbjct: 119  QYARFYLWNPVIRKCLTILSSDS------------SFIVGFGFEYKKNDYKVVKIMHHPE 166

Query: 783  ALNLMTCRVELYSLSTDSWRPID----TVVPFPHVYSHPNPPLRNGIYCWLGNVYDEDES 950
             +N +   V++Y LST +WR I     T++ F   +        NG++ WL     ++ S
Sbjct: 167  KMNPVLI-VKIYDLSTSAWRSITVENRTLLNF--CFGDRKRAYSNGVFHWLARAPGKEGS 223

Query: 951  -ERHAILSFDFTTEVFKTMTVPDVYGVDSTAYLRLALLRENIACIE 1085
             ++  + SFD   EVF+ M  PD     +  +L L +  E++A ++
Sbjct: 224  PDKLTLASFDLGDEVFREMMFPDDLAQVNENHLSLVVYGESLALLQ 269


>dbj|BAC66627.1| F-box [Prunus mume]
          Length = 428

 Score =  120 bits (300), Expect = 8e-25
 Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 48/317 (15%)
 Frame = +3

Query: 282  EDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNDDHQLIIL----- 446
            ED++  IL  LP  SL+RF+ V KSW  LI+   F+  HL+   DN       +L     
Sbjct: 13   EDMMGNILSRLPPKSLMRFRCVLKSWHDLIDKPSFVDHHLSISMDNKVTSSTYVLLKHNV 72

Query: 447  --DPSQCDDTTCY-SLRFSLLSGSNYKVPKVLDLPHHFDNALE---------------SP 572
              DPS  DD     +  F+  S     +   L+L    D+ LE               S 
Sbjct: 73   LTDPSIKDDEKAVRATLFNPDSNQRDILLSSLNLGSLVDDGLEIENHVVPPPMRGYALSL 132

Query: 573  KIIASCNGIICLRPDLSQNVSLWNPALREFRILPK-----PSVPPEELVPGSRLDFY--- 728
            +I  SC+G+ICL    S+++ L NPAL E+R+LPK     P   P +       D+Y   
Sbjct: 133  EISGSCDGLICLNTFNSEDIVLCNPALEEYRVLPKSCILLPPRVPRQFEENEDDDYYEED 192

Query: 729  -----------FGFGYDAKTNDYKVVKVI-----ALNLMTCRVELYSLSTDSWRPIDTVV 860
                        GFGYD  + DYKVV+              +VE+YSL+ D+WR +   +
Sbjct: 193  DDDEIESNPKCVGFGYDPNSKDYKVVRAAQFVSGVFTQHPSKVEVYSLAADTWREVPVDI 252

Query: 861  PFPHVYSHPNPPLR-NGIYCWLGNVYDEDESERHAILSFDFTTEVFKTMTVPDVYGVDST 1037
              PH   +P+  +   G + W+    +    ER+ ILSFD + EVF  + +P+  G D+ 
Sbjct: 253  Q-PHGSLNPSYQMYFKGFFYWIAYWTE----ERNVILSFDMSEEVFHDIALPE-SGPDAY 306

Query: 1038 AYLRLALLRENIACIEW 1088
             Y  +A+ ++++A + +
Sbjct: 307  EYTSIAVWKDSLALLTY 323