BLASTX nr result

ID: Coptis21_contig00011345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011345
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868530.1| predicted protein [Arabidopsis lyrata subsp....   123   1e-26
gb|ACP30621.1| disease resistance protein [Brassica rapa subsp. ...   122   4e-26
gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. ...   119   3e-25
ref|NP_194452.1| NB-ARC domain-containing disease resistance pro...   117   1e-24
ref|XP_003539578.1| PREDICTED: probable disease resistance prote...   117   1e-24

>ref|XP_002868530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314366|gb|EFH44789.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 851

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/138 (47%), Positives = 86/138 (62%), Gaps = 4/138 (2%)
 Frame = -3

Query: 412 KVEQLSEDEAWELFLVNVGE---KLXXXXXXXXXXXXXECCGLPLAIITIGRSMR-RKDV 245
           KVE LS DEAW LF   VGE   K              +CCGLPLA+  IG++M  ++DV
Sbjct: 306 KVECLSRDEAWVLFRNIVGETPLKCHQDIPTLARKVAEKCCGLPLALNVIGKAMACKEDV 365

Query: 244 DEWRVALSDLQESTSLNMDMEEQVIQRLKFSYDRLREENHQKCFLYCALYPEDYEIDTSE 65
            EWR A++ L  S+     MEE+++  LKFSYD L +E  + CFLYC+L+PEDYE+   E
Sbjct: 366 HEWRHAINVLNSSSHEFPGMEEKILSILKFSYDGLGDEKVKLCFLYCSLFPEDYELKKEE 425

Query: 64  LIEYWVMEGLVKGSSKED 11
           LIEYW+ EG + G+  ED
Sbjct: 426 LIEYWICEGFINGNIDED 443


>gb|ACP30621.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 813

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
 Frame = -3

Query: 412 KVEQLSEDEAWELFLVNVGE---KLXXXXXXXXXXXXXECCGLPLAIITIGRSMRRK-DV 245
           +++ L  +EAWELF   VGE   KL             +C GLPLA+  IG++M+ K DV
Sbjct: 306 QIDCLPANEAWELFRSIVGEDTLKLHQDIPTLAKKICEKCYGLPLALNVIGKAMKYKEDV 365

Query: 244 DEWRVALSDLQESTSLNMDMEEQVIQRLKFSYDRLREENHQKCFLYCALYPEDYEIDTSE 65
            EWR A   L  S+     MEE+++  LKFSYD L+EEN + CFLYC+L+PEDYEI   E
Sbjct: 366 HEWRHAKKVLSTSSHEFPGMEEKILSILKFSYDGLKEENVKSCFLYCSLFPEDYEIKKEE 425

Query: 64  LIEYWVMEGLVKGSSKED 11
           LIEYW+ EG + G   ED
Sbjct: 426 LIEYWINEGFINGKRDED 443


>gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 852

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/138 (45%), Positives = 86/138 (62%), Gaps = 4/138 (2%)
 Frame = -3

Query: 412 KVEQLSEDEAWELFLVNVGE---KLXXXXXXXXXXXXXECCGLPLAIITIGRSMR-RKDV 245
           K++ L+ +EAWELF   VGE   K              +C GLPLA+  IG++M  ++DV
Sbjct: 302 KMDCLTRNEAWELFQNAVGEVRLKGHPDIPTLAKQICEKCYGLPLALNVIGKAMSCKEDV 361

Query: 244 DEWRVALSDLQESTSLNMDMEEQVIQRLKFSYDRLREENHQKCFLYCALYPEDYEIDTSE 65
            EWR A+  L+ S+     ME++++  LKFSYD L +E  + CFLYC+L+PEDYEI   E
Sbjct: 362 HEWRDAIDVLKTSSDKFPGMEKKILSILKFSYDGLEDEKVKSCFLYCSLFPEDYEITKEE 421

Query: 64  LIEYWVMEGLVKGSSKED 11
           LIEYW+ EG +KG   ED
Sbjct: 422 LIEYWISEGFIKGERNED 439


>ref|NP_194452.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46395628|sp|O81825.1|DRL28_ARATH RecName:
           Full=Probable disease resistance protein At4g27220
           gi|3269283|emb|CAA19716.1| putative protein [Arabidopsis
           thaliana] gi|7269575|emb|CAB79577.1| putative protein
           [Arabidopsis thaliana] gi|91806732|gb|ABE66093.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659912|gb|AEE85312.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 919

 Score =  117 bits (293), Expect = 1e-24
 Identities = 67/139 (48%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = -3

Query: 412 KVEQLSEDEAWELFLVNVGEKLXXXXXXXXXXXXXE-CCGLPLAIITIGRSMRRK-DVDE 239
           KV  L E EAWELF  NVGE                 CCGLPLAIITIGR++R K  V+ 
Sbjct: 268 KVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEV 327

Query: 238 WRVALSDLQESTSLNMDMEEQVIQRLKFSYDRLREENHQKCFLYCALYPEDYEIDTSELI 59
           W+  L+ L+ S   ++D EE++   LK SYD L ++N + CFL+CAL+PEDY I  SELI
Sbjct: 328 WKHTLNLLKRSAP-SIDTEEKIFGTLKLSYDFL-QDNMKSCFLFCALFPEDYSIKVSELI 385

Query: 58  EYWVMEGLVKGSSKEDEML 2
            YWV EGL+ G    ++M+
Sbjct: 386 MYWVAEGLLDGQHHYEDMM 404


>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score =  117 bits (293), Expect = 1e-24
 Identities = 67/139 (48%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
 Frame = -3

Query: 412 KVEQLSEDEAWELFLVNVGEK--LXXXXXXXXXXXXXECCGLPLAIITIGRSMRR-KDVD 242
           KVE L+++EAW LFL N+G++  L             EC GLPLAIIT+ RSMR  +++ 
Sbjct: 292 KVEPLAKEEAWTLFLDNLGQQTTLSPEVTKVARSVAKECAGLPLAIITMARSMRGVEEIC 351

Query: 241 EWRVALSDLQESTSLNMDMEEQVIQRLKFSYDRLREENHQKCFLYCALYPEDYEIDTSEL 62
           EWR AL +L+ +     +ME +V++ L+FSYD L +   QKCFL CALYPED+EID   L
Sbjct: 352 EWRHALEELRNTEIRLEEMEMEVLRVLQFSYDHLNDNMLQKCFLCCALYPEDFEIDRDVL 411

Query: 61  IEYWVMEGLVKGSSKEDEM 5
           IE +V EGLV G    + M
Sbjct: 412 IESFVDEGLVNGMKSLEAM 430


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