BLASTX nr result
ID: Coptis21_contig00011343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011343
(1497 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 228 4e-57
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 218 3e-54
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 218 3e-54
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 218 4e-54
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 217 6e-54
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 228 bits (580), Expect = 4e-57
Identities = 142/482 (29%), Positives = 236/482 (48%), Gaps = 6/482 (1%)
Frame = -1
Query: 1491 LLERFQKNLAGWKAKCLSKAGRLTLVNAVLAALPTHVMSCSILPAQTVDKMEAMRRSFLW 1312
LL+R K L GWK K LS+AG+ L+ AV+ ALPT++M LP + ++ + F W
Sbjct: 775 LLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWW 834
Query: 1311 GHVPSERKLHYFSWRLACTAKKDGGLGIKDLQLQNYGLFAKKAWDLLDPK-SLWAQQMQG 1135
G ERK+H+ SW C K GG+G KDL + N L K+ W LL K SL ++ M
Sbjct: 835 GGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSA 894
Query: 1134 RYFHLTTFMQAVVKANSSYMWKQLCEARKIVRAGAIWNLQNGSSIKAWDDRWIPNID--F 961
+Y+ A + + SY W+ + A+ +V G IW + +G+ I W W+ + + F
Sbjct: 895 KYYPHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRF 954
Query: 960 IQELQGKPADCPFDYVSDFIDFDAQSWDWNLLNEYWP*EYVEKILSIPITISDHEDSLVW 781
I+ + + + V D +D + + W+ L+ ++ + IL+IP++ +D L W
Sbjct: 955 IKSARVE----GLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTW 1010
Query: 780 RWDNCGRYTVKSAYNGCTQLINGGDIGDSEESLFKYVWKSKIAFKQKFFVWQCMQGVIPT 601
+ G Y+VK+AY L GG++ D ++ +W ++ K + F+W+ +P
Sbjct: 1011 AYSKDGTYSVKTAY----MLGKGGNLDDFHR-VWNILWSLNVSPKVRHFLWRACTSSLPV 1065
Query: 600 ADLLASHHIYVPDQCTLCGDDKESQVHLFFQCMFSRAIWYGTNMAGFIDSENIHEGTCFK 421
+L H+ C C + E+Q HLF++C S +W + +I I +
Sbjct: 1066 RKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLW--EELGSYILLPGIEDEAMCD 1123
Query: 420 EKIKVFIQKARRMQDGDIQLCCFVATLWSIWLARNDSRFERKTRPPLYYIHR-AQQILHL 244
++ A+ +Q G C++ LW++W+ RN FE ++P R +Q+
Sbjct: 1124 TLVRWSQMDAKVVQKG-----CYI--LWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDF 1176
Query: 243 VNTVLK-QRKLKESIVIY-IKWFPPAEGWVKLNTDGASCGNPGYAGASCILRGSDGNFLF 70
N +K ++ S + +W+ P G +KLNTD AS G+ G I R S+G F
Sbjct: 1177 NNYAVKIYGGMRSSAALSPSRWYAPPVGAIKLNTD-ASLAEEGWVGLGVIARDSEGKVCF 1235
Query: 69 GA 64
A
Sbjct: 1236 AA 1237
>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
sativa Japonica Group]
Length = 1764
Score = 218 bits (556), Expect = 3e-54
Identities = 145/515 (28%), Positives = 240/515 (46%), Gaps = 26/515 (5%)
Frame = -1
Query: 1491 LLERFQKNLAGWKAKCLSKAGRLTLVNAVLAALPTHVMSCSILPAQTVDKMEAMRRSFLW 1312
L + K + W LS G+ L+ AV+ A+P +VM LP +D + + ++F W
Sbjct: 899 LQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDLTKLTKNFWW 958
Query: 1311 GHVPSERKLHYFSWRLACTAKKDGGLGIKDLQLQNYGLFAKKAWDLLD-PKSLWAQQMQG 1135
+ +RK H+ +W K GGLG +D +L N L A++AW L+ P SL A+ ++
Sbjct: 959 DSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCARVLKA 1018
Query: 1134 RYFHLTTFMQAVVKANSSYMWKQLCEARKIVRAGAIWNLQNGSSIKAWDDRWIPNIDFIQ 955
+YF + + +NSS W+ + +++ G IW + NG+SI+ W D W+P +
Sbjct: 1019 KYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRR 1078
Query: 954 ELQGKPADCPFDYVSDFIDFDAQSWDWNLLNEYWP*EYVEKILSIPITISDHEDSLVWRW 775
+ GK A+C +VSD I D SWD +++Y+ E IL+I I+ ED + W
Sbjct: 1079 PITGK-ANCRLKWVSDLITEDG-SWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHP 1136
Query: 774 DNCGRYTVKSAYNGCTQLINGGDIGDSE----ESLFKYVWKSKIAFKQKFFVWQCMQGVI 607
D G ++V+SAY QL+N + S ++ +WK K+ K K F W+ +
Sbjct: 1137 DKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCL 1196
Query: 606 PTADLLASHHIYVPDQCTLCGDDKESQVHLFFQCMFSRAIWYGTNMAGFIDSENIHEGTC 427
T + D C +C + E H +C+ + +W + +G + S +I
Sbjct: 1197 ATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQLWSCMHKSGSV-SVDIKASVL 1255
Query: 426 FKEKIKVFIQKARRMQDGDIQLCCFVATLWSIWLARNDSRFERKTRPP------------ 283
+ + ++K + + F+ TLW W RN+ K+ PP
Sbjct: 1256 GRFWLFDCLEKI-----PEYEQAMFLMTLWRNWYVRNE-LIHGKSAPPTETSQRFIQSYV 1309
Query: 282 --LYYIHRAQQI-----LHLVNTVLKQRKLKESIVIYIK--WFPPAEGWVKLNTDGASCG 130
L+ I +A Q H+V TV + K ++ + W P +GW+KLN DG+
Sbjct: 1310 DLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQPCWERPKDGWMKLNVDGSFDA 1369
Query: 129 NPGYAGASCILRGSDGNFLFGAAVPI*MLQTTLQS 25
+ G G ILR S G+ +F + P+ L+S
Sbjct: 1370 SSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLES 1404
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 218 bits (556), Expect = 3e-54
Identities = 145/515 (28%), Positives = 240/515 (46%), Gaps = 26/515 (5%)
Frame = -1
Query: 1491 LLERFQKNLAGWKAKCLSKAGRLTLVNAVLAALPTHVMSCSILPAQTVDKMEAMRRSFLW 1312
L + K + W LS G+ L+ AV+ A+P +VM LP +D + + ++F W
Sbjct: 1502 LQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDLTKLTKNFWW 1561
Query: 1311 GHVPSERKLHYFSWRLACTAKKDGGLGIKDLQLQNYGLFAKKAWDLLD-PKSLWAQQMQG 1135
+ +RK H+ +W K GGLG +D +L N L A++AW L+ P SL A+ ++
Sbjct: 1562 DSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCARVLKA 1621
Query: 1134 RYFHLTTFMQAVVKANSSYMWKQLCEARKIVRAGAIWNLQNGSSIKAWDDRWIPNIDFIQ 955
+YF + + +NSS W+ + +++ G IW + NG+SI+ W D W+P +
Sbjct: 1622 KYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDHSRR 1681
Query: 954 ELQGKPADCPFDYVSDFIDFDAQSWDWNLLNEYWP*EYVEKILSIPITISDHEDSLVWRW 775
+ GK A+C +VSD I D SWD +++Y+ E IL+I I+ ED + W
Sbjct: 1682 PITGK-ANCRLKWVSDLITEDG-SWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHP 1739
Query: 774 DNCGRYTVKSAYNGCTQLINGGDIGDSE----ESLFKYVWKSKIAFKQKFFVWQCMQGVI 607
D G ++V+SAY QL+N + S ++ +WK K+ K K F W+ +
Sbjct: 1740 DKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCL 1799
Query: 606 PTADLLASHHIYVPDQCTLCGDDKESQVHLFFQCMFSRAIWYGTNMAGFIDSENIHEGTC 427
T + D C +C + E H +C+ + +W + +G + S +I
Sbjct: 1800 ATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQLWSCMHKSGSV-SVDIKASVL 1858
Query: 426 FKEKIKVFIQKARRMQDGDIQLCCFVATLWSIWLARNDSRFERKTRPP------------ 283
+ + ++K + + F+ TLW W RN+ K+ PP
Sbjct: 1859 GRFWLFDCLEKI-----PEYEQAMFLMTLWRNWYVRNE-LIHGKSAPPTETSQRFIQSYV 1912
Query: 282 --LYYIHRAQQI-----LHLVNTVLKQRKLKESIVIYIK--WFPPAEGWVKLNTDGASCG 130
L+ I +A Q H+V TV + K ++ + W P +GW+KLN DG+
Sbjct: 1913 DLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQPCWERPKDGWMKLNVDGSFDA 1972
Query: 129 NPGYAGASCILRGSDGNFLFGAAVPI*MLQTTLQS 25
+ G G ILR S G+ +F + P+ L+S
Sbjct: 1973 SSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLES 2007
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 218 bits (554), Expect = 4e-54
Identities = 142/481 (29%), Positives = 225/481 (46%), Gaps = 10/481 (2%)
Frame = -1
Query: 1485 ERFQKNLAGWKAKCLSKAGRLTLVNAVLAALPTHVMSCSILPAQTVDKMEAMRRSFLWGH 1306
E+ Q L GW AK LS+ G+ L+ ++ ALP +VMSC LP K+ + F W
Sbjct: 769 EKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNS 828
Query: 1305 VPSERKLHYFSWRLACTAKKDGGLGIKDLQLQNYGLFAKKAWDLLDPK-SLWAQQMQGRY 1129
+ +RK+H+ SW+ K GG G KDLQ N L AK+AW +L K SL+++ Q RY
Sbjct: 829 MQQKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRY 888
Query: 1128 FHLTTFMQAVVKANSSYMWKQLCEARKIVRAGAIWNLQNGSSIKAWDDRWIPNIDFIQEL 949
F + F+ A + SY W+ + R+++ G + NG W D+W+ + + L
Sbjct: 889 FSNSDFLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPL 948
Query: 948 QGKPADCPFDYVSDFIDFDAQSWDWNLLNEYWP*EYVEKILSIPITISDHEDSLVWRWDN 769
+ VS ID +++W+ N+L + +P + VE IL + EDS W +
Sbjct: 949 NRRRFINVDLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIILK-QRPLFFKEDSFCWLHSH 1007
Query: 768 CGRYTVKSAYNGCT-----QLINGGDIGDSEESLFKYVWKSKIAFKQKFFVWQCMQGVIP 604
G Y+VK+ Y + +L + S SLF +W A K + F+W+ + G IP
Sbjct: 1008 NGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIP 1067
Query: 603 TADLLASHHIYVPDQCTLCGDDKESQVHLFFQCMFSRAIWYGTNMAGFIDSENIHEGTCF 424
D L + I D C +C + E+ H+ F+C +R +W T+++ G+ F
Sbjct: 1068 VEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSS--------AGSEF 1119
Query: 423 KEKIKVFIQKARRM-QDGDI-QLCCFVA--TLWSIWLARNDSRFERKTRPPLYYIHRAQQ 256
+ + + + Q D+ FV+ LW +W RN FE K + +A +
Sbjct: 1120 SNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYE 1179
Query: 255 ILHLVNTVLKQRKLKESIVIYIKWFPPAEGWVKLNTDGASCGNPGYAGASCILRGSDGNF 76
H + + E + KW PP G +K N A ++GAS ++R S G
Sbjct: 1180 AYHEWFSAQTHMQNDEKHLKITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKV 1239
Query: 75 L 73
L
Sbjct: 1240 L 1240
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 217 bits (553), Expect = 6e-54
Identities = 140/483 (28%), Positives = 227/483 (46%), Gaps = 7/483 (1%)
Frame = -1
Query: 1491 LLERFQKNLAGWKAKCLSKAGRLTLVNAVLAALPTHVMSCSILPAQTVDKMEAMRRSFLW 1312
L++R K L GWK K LS+AG+ L+ +V+ A+PT++M P + K+++ F W
Sbjct: 772 LIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWW 831
Query: 1311 GHVPSERKLHYFSWRLACTAKKDGGLGIKDLQLQNYGLFAKKAWDLL-DPKSLWAQQMQG 1135
G ++RK+H+ +W C K GG+G KDL + N L ++AW L +P+SL + M+
Sbjct: 832 GSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKA 891
Query: 1134 RYFHLTTFMQAVVKANSSYMWKQLCEARKIVRAGAIWNLQNGSSIKAWDDRWIPNIDFIQ 955
+YF F+ A + +SSY W + ++ +++ G IW + NGS I W D W+ +D
Sbjct: 892 KYFPNCDFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWV--LDEGG 949
Query: 954 ELQGKPADCPFDYVSDFIDFDAQSWDWNLLNEYWP*EYVEKILSIPITISDHEDSLVWRW 775
+VS+ IDFD W +LL + + IL+ P++ + D L W +
Sbjct: 950 RFLTSTPHASIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAF 1009
Query: 774 DNCGRYTVKSAYNGCTQLINGGDIGDSEESLFKYVWKSKIAFKQKFFVWQCMQGVIPTAD 595
Y+VK+AY +I G D+ + +W ++ K + F+W+ +P
Sbjct: 1010 TKDATYSVKTAY-----MIGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRS 1064
Query: 594 LLASHHIYVPDQCTLCGDDKESQVHLFFQCMFSRAIWYGTNMAGFIDSENIHEGTCFKEK 415
LL H+ D C + E+Q H F C R +W + + S + C
Sbjct: 1065 LLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQN-LCSRDASMSMC---- 1119
Query: 414 IKVFIQKARRMQDGDIQL-CCFVATLWSIWLARNDSRFERKTRPPLYYIHRAQQILHLVN 238
+ + R DG +++ ++A W IW RN F KT P + R +++
Sbjct: 1120 ---DLLVSWRSLDGKLRIKGAYLA--WCIWGERNAKIFNNKTTPSSVLMQRVSRLVE--E 1172
Query: 237 TVLKQRKLKESIV-----IYIKWFPPAEGWVKLNTDGASCGNPGYAGASCILRGSDGNFL 73
R++ + +V +W P +KLN D AS G+ G S I R SDG L
Sbjct: 1173 NGSHARRIYQPLVPRRTGSPRQWIAPPADSIKLNVD-ASLAVDGWVGLSVIARRSDGGVL 1231
Query: 72 FGA 64
F A
Sbjct: 1232 FAA 1234