BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011338
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   134   3e-29
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   130   5e-28
ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago trunca...   127   4e-27
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   125   9e-27
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...   125   1e-26

>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  134 bits (337), Expect = 3e-29
 Identities = 92/201 (45%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
 Frame = -3

Query: 796 MKHFRLISPFLSPTKIKSKPHFLSPWNHTCFARESTL-----------SPEEEETKFTPS 650
           M+HFRLISP LS  +   K  F +P     F  +ST+           S  +E     PS
Sbjct: 1   MRHFRLISPHLSRIR---KTLFRNP----TFNPQSTIPRSPNLIYQFTSIAQEPNPPAPS 53

Query: 649 ENVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXXXXMXXXXXXXXXX 470
           + V+A+VDE+SE    E+ DL E+LR    I                  M          
Sbjct: 54  DKVAALVDEISELTLLEISDLTEVLRNKLDIK------EMPVMAVMMPGMGFSGMKGGVK 107

Query: 469 XXXXXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLK 290
                         KT FD+KLEGF+AA+KIK+IKEVR FTDLGLKEAKDLVEKAPTLLK
Sbjct: 108 GGAAGAAKAEEKVEKTVFDVKLEGFDAAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLK 167

Query: 289 KGVTKEEAQKIIDKMKEIGAK 227
           KGVTKEEA+KI  KMKE+GAK
Sbjct: 168 KGVTKEEAEKITAKMKEVGAK 188


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  130 bits (326), Expect = 5e-28
 Identities = 93/200 (46%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
 Frame = -3

Query: 796 MKHFRLISPFLSPT---KIKSKPHF---LSP----WNHTCFARESTLSPEEEETKFTPSE 647
           M++F  I P LS     +I   P F   L+P    WN   F  + T S +       PSE
Sbjct: 1   MRYFGSIVPQLSRNLKLRITQNPTFCDSLNPNSHLWNRLNFVLKYTSSAQ------VPSE 54

Query: 646 NVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXXXXMXXXXXXXXXXX 467
            VS+IVDE+S     E+ DL E+LRK   IN                 M           
Sbjct: 55  RVSSIVDEISGLTLLEVSDLTELLRKKLDIN---------EMPVMAVMMPGMGFGVRGAG 105

Query: 466 XXXXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKK 287
                        KTAFDLKLE F+AA+KIKIIKEVRTFTDLGLKEAKDLVE APTLLKK
Sbjct: 106 GAAPKAAEVKAAEKTAFDLKLEAFDAAAKIKIIKEVRTFTDLGLKEAKDLVEHAPTLLKK 165

Query: 286 GVTKEEAQKIIDKMKEIGAK 227
           GV KEEA+ II+KMK +GAK
Sbjct: 166 GVPKEEAENIIEKMKAVGAK 185


>ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago truncatula]
           gi|355523407|gb|AET03861.1| 50S ribosomal protein L12-2
           [Medicago truncatula] gi|388508470|gb|AFK42301.1|
           unknown [Medicago truncatula]
          Length = 195

 Score =  127 bits (318), Expect = 4e-27
 Identities = 85/181 (46%), Positives = 103/181 (56%)
 Frame = -3

Query: 769 FLSPTKIKSKPHFLSPWNHTCFARESTLSPEEEETKFTPSENVSAIVDELSEFNSTELMD 590
           FLSP     KP+ + P   +     +T SP  E        NVSAIV+EL+     E MD
Sbjct: 22  FLSPQI--PKPYIIPPNPKSHLRNYNTDSPNHE--------NVSAIVEELAGLTLIEAMD 71

Query: 589 LVEILRKNAGINLNEXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXKTAFDL 410
           LVE++R+  GIN                 M                        KTAFD+
Sbjct: 72  LVEVMREKKGIN-ELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGGEVKKVEEKTAFDV 130

Query: 409 KLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGA 230
           KL+GF+AASKIK+IKEVR+FT LGLKEAKDLVEK+PTLLKKGVTKEEA+ II K+KE+GA
Sbjct: 131 KLDGFDAASKIKVIKEVRSFTSLGLKEAKDLVEKSPTLLKKGVTKEEAEGIIAKLKEVGA 190

Query: 229 K 227
           K
Sbjct: 191 K 191


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  125 bits (315), Expect = 9e-27
 Identities = 80/156 (51%), Positives = 92/156 (58%)
 Frame = -3

Query: 694 STLSPEEEETKFTPSENVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXX 515
           +T SPE       PSE VSAIVDE+S     E+ DL E+LR+   +              
Sbjct: 52  TTASPESRPA---PSERVSAIVDEISGLTLLEVADLTEVLREKLDVK------EMPVMTM 102

Query: 514 XXXXMXXXXXXXXXXXXXXXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGL 335
               M                        KTAFD+KL+ F+AASKIKIIKEVRTFT+LGL
Sbjct: 103 MMPGMGFGGFRGAGKGGPGAKGVEEKKEEKTAFDVKLDAFDAASKIKIIKEVRTFTNLGL 162

Query: 334 KEAKDLVEKAPTLLKKGVTKEEAQKIIDKMKEIGAK 227
           KEAKDLVEKAPTLLKKGVTKEEA+ II KMKE+GAK
Sbjct: 163 KEAKDLVEKAPTLLKKGVTKEEAETIIAKMKEVGAK 198


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score =  125 bits (314), Expect = 1e-26
 Identities = 90/204 (44%), Positives = 112/204 (54%), Gaps = 6/204 (2%)
 Frame = -3

Query: 820 KYLTNHKTMKHF--RLISP----FLSPTKIKSKPHFLSPWNHTCFARESTLSPEEEETKF 659
           +Y +  K + HF   L  P    F+SP +I   P  L P++    ARE + S   +    
Sbjct: 2   RYYSQFKHLSHFLKTLTRPQNPTFVSP-RISQNPRPL-PFH----ARECSSSSASQSQG- 54

Query: 658 TPSENVSAIVDELSEFNSTELMDLVEILRKNAGINLNEXXXXXXXXXXXXXXMXXXXXXX 479
             SE V+AIVDEL      E+MDLVE++R+  G+N                 M       
Sbjct: 55  --SEKVAAIVDELMGLTLLEVMDLVEVMREKRGVN------ELPIAMLMVPGMGVPRGVP 106

Query: 478 XXXXXXXXXXXXXXXXXKTAFDLKLEGFEAASKIKIIKEVRTFTDLGLKEAKDLVEKAPT 299
                            KT FD+KLEGF+AA+KIK+IKEVRTFT LGLKEAKDLVEK P 
Sbjct: 107 NGGGGGAAGVAEVKAVEKTVFDVKLEGFDAATKIKVIKEVRTFTSLGLKEAKDLVEKVPA 166

Query: 298 LLKKGVTKEEAQKIIDKMKEIGAK 227
           +LKKGVTKEEA+ II KMKE+GAK
Sbjct: 167 MLKKGVTKEEAESIIAKMKEVGAK 190