BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011334
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   446   e-123
gb|ABK92556.1| unknown [Populus trichocarpa]                          433   e-119
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   426   e-117
ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   425   e-117
emb|CBI33259.3| unnamed protein product [Vitis vinifera]              423   e-116

>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
            vinifera]
          Length = 545

 Score =  446 bits (1147), Expect = e-123
 Identities = 224/286 (78%), Positives = 257/286 (89%), Gaps = 1/286 (0%)
 Frame = -3

Query: 976  NAIDMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILQEFNAGLFDYLIATDDNQTKD-EQ 800
            N+IDM FRL+LFLE+FG++S VLNAELPQNSRLHIL+EFNAGLFDYLIATD +Q K+ EQ
Sbjct: 230  NSIDMAFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQ 289

Query: 799  VNKDTDVASTKSKRQRRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRA 620
             ++ + +   KS++  +QKLDSEFGVVRGIDFKNV+TVINF+MPQ A  YVHRIGRTGRA
Sbjct: 290  ADEGSQIEPRKSRKHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRA 349

Query: 619  YNTGASVSLVSSNEMEVFEEIKSTSGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKS 440
            YNTGASVSLVS +EME+ EEIKS  GD+EN  SNFIAPFPLL+KNAVESLRYRAEDV+KS
Sbjct: 350  YNTGASVSLVSPDEMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKS 409

Query: 439  VTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAMPEYL 260
            VTK+AVRESRAQDLRNEI+NSEKLKAHFE N RDLDLLKHDKVLSKKP P HLR +P+YL
Sbjct: 410  VTKLAVRESRAQDLRNEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYL 469

Query: 259  LDPTTQEASKILKLARAAMGNSNSSRRQGSKRRFKKIRDPLRTFSA 122
            LDPTTQEASKI+KLARAAMGN+N +RRQGS+R+F+K RDPL+TFSA
Sbjct: 470  LDPTTQEASKIVKLARAAMGNTNPARRQGSRRKFRKSRDPLKTFSA 515


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  433 bits (1113), Expect = e-119
 Identities = 216/286 (75%), Positives = 254/286 (88%), Gaps = 1/286 (0%)
 Frame = -3

Query: 976  NAIDMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILQEFNAGLFDYLIATDDNQTKDEQV 797
            NAIDM FRL+LFLE+FG++S VLNAELPQNSRLHIL+EFNAGLFDYLIATDD +TK+++ 
Sbjct: 304  NAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDRETKEKEK 363

Query: 796  NKDTDVAST-KSKRQRRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRA 620
              +  +A T KSK+  +QKLDSEFGVVRGIDFKNV+TVIN+DMP +A  YVHRIGRTGRA
Sbjct: 364  ANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKNVHTVINYDMPLSATGYVHRIGRTGRA 423

Query: 619  YNTGASVSLVSSNEMEVFEEIKSTSGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKS 440
            Y+TG+SVSLVS +EME+ EEIKS  GD+EN+ SN I+P+PLL+KNAVESLRYRAED AKS
Sbjct: 424  YSTGSSVSLVSPDEMEILEEIKSFLGDDENNESNVISPYPLLTKNAVESLRYRAEDTAKS 483

Query: 439  VTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAMPEYL 260
            VTK+AVRE+RAQDLRNEI+NSEKLKAHFE NPRDLDLLKHDKVLSKKPP  HL  +P+YL
Sbjct: 484  VTKIAVREARAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVPDYL 543

Query: 259  LDPTTQEASKILKLARAAMGNSNSSRRQGSKRRFKKIRDPLRTFSA 122
            LD TT+EASK++KLARAAMGN+NS RRQG KR F+K +DPL++FSA
Sbjct: 544  LDATTKEASKMVKLARAAMGNNNSGRRQGPKRNFRKSKDPLKSFSA 589


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 616

 Score =  426 bits (1095), Expect = e-117
 Identities = 209/285 (73%), Positives = 251/285 (88%), Gaps = 1/285 (0%)
 Frame = -3

Query: 976  NAIDMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILQEFNAGLFDYLIATDDNQTKD-EQ 800
            N+IDM FRLRLFLE+FG++S +LNAELPQNSRLHIL+EFNAGLFDYLIATDD++TK+ EQ
Sbjct: 301  NSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILEEFNAGLFDYLIATDDSETKEKEQ 360

Query: 799  VNKDTDVASTKSKRQRRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRA 620
               D ++A ++  ++ +QKLDSEFGVVRGIDFKNV+TV+N+DMP  AA YVHRIGRTGR 
Sbjct: 361  EQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKNVHTVVNYDMPLNAAGYVHRIGRTGRG 420

Query: 619  YNTGASVSLVSSNEMEVFEEIKSTSGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKS 440
            YN+G+SVSLVS +EME+ E++KS  GD+EN  SN IAPFPLL+KNAVESLRYRAEDVAKS
Sbjct: 421  YNSGSSVSLVSPDEMEILEDVKSFLGDDENKDSNIIAPFPLLTKNAVESLRYRAEDVAKS 480

Query: 439  VTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAMPEYL 260
            VTK+AV+E+RAQDLRNEI+NSEKLKAHFE NPRDLDLLKHDKVLSK PP  HLR +P+YL
Sbjct: 481  VTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDLDLLKHDKVLSKNPPAPHLRDVPDYL 540

Query: 259  LDPTTQEASKILKLARAAMGNSNSSRRQGSKRRFKKIRDPLRTFS 125
            +D TT+EASK++KLARAAMG +N SRRQGSK++F K +DPL+  S
Sbjct: 541  MDATTKEASKMVKLARAAMGKNNPSRRQGSKKKFIKSKDPLKALS 585


>ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 305

 Score =  425 bits (1092), Expect = e-117
 Identities = 214/275 (77%), Positives = 246/275 (89%), Gaps = 1/275 (0%)
 Frame = -3

Query: 943 FLEQFGMRSVVLNAELPQNSRLHILQEFNAGLFDYLIATDDNQTKD-EQVNKDTDVASTK 767
           +L QFG++S VLNAELPQNSRLHIL+EFNAGLFDYLIATD +Q K+ EQ ++ + +   K
Sbjct: 1   YLWQFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRK 60

Query: 766 SKRQRRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRAYNTGASVSLVS 587
           S++  +QKLDSEFGVVRGIDFKNV+TVINF+MPQ A  YVHRIGRTGRAYN+GASVSLVS
Sbjct: 61  SRKHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNSGASVSLVS 120

Query: 586 SNEMEVFEEIKSTSGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRA 407
            +EME+ EEIKS  GD+EN  SNFIAPFPLL+KNAVESLRYRAEDV+KSVTK+AVRESRA
Sbjct: 121 PDEMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRA 180

Query: 406 QDLRNEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAMPEYLLDPTTQEASKI 227
           QDLRNEI+NSEKLKAHFE N RDLDLLKHDKVLSKKP P HLR +P+YLLDPTTQEASKI
Sbjct: 181 QDLRNEILNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKI 240

Query: 226 LKLARAAMGNSNSSRRQGSKRRFKKIRDPLRTFSA 122
           +KLARAAMGN+N +RRQGS+R+F+K RDPL+TFSA
Sbjct: 241 VKLARAAMGNTNPARRQGSRRKFRKSRDPLKTFSA 275


>emb|CBI33259.3| unnamed protein product [Vitis vinifera]
          Length = 8206

 Score =  423 bits (1088), Expect = e-116
 Identities = 213/271 (78%), Positives = 243/271 (89%), Gaps = 1/271 (0%)
 Frame = -3

Query: 931  FGMRSVVLNAELPQNSRLHILQEFNAGLFDYLIATDDNQTKD-EQVNKDTDVASTKSKRQ 755
            FG++S VLNAELPQNSRLHIL+EFNAGLFDYLIATD +Q K+ EQ ++ + +   KS++ 
Sbjct: 7906 FGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSRKH 7965

Query: 754  RRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRAYNTGASVSLVSSNEM 575
             +QKLDSEFGVVRGIDFKNV+TVINF+MPQ A  YVHRIGRTGRAYNTGASVSLVS +EM
Sbjct: 7966 SKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPDEM 8025

Query: 574  EVFEEIKSTSGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLR 395
            E+ EEIKS  GD+EN  SNFIAPFPLL+KNAVESLRYRAEDV+KSVTK+AVRESRAQDLR
Sbjct: 8026 EILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQDLR 8085

Query: 394  NEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAMPEYLLDPTTQEASKILKLA 215
            NEI+NSEKLKAHFE N RDLDLLKHDKVLSKKP P HLR +P+YLLDPTTQEASKI+KLA
Sbjct: 8086 NEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLA 8145

Query: 214  RAAMGNSNSSRRQGSKRRFKKIRDPLRTFSA 122
            RAAMGN+N +RRQGS+R+F+K RDPL+TFSA
Sbjct: 8146 RAAMGNTNPARRQGSRRKFRKSRDPLKTFSA 8176