BLASTX nr result

ID: Coptis21_contig00011325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011325
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279626.1| PREDICTED: trafficking protein particle comp...   280   2e-73
ref|XP_004144858.1| PREDICTED: trafficking protein particle comp...   275   6e-72
ref|XP_002313700.1| predicted protein [Populus trichocarpa] gi|1...   275   6e-72
ref|XP_003624261.1| Trafficking protein particle complex subunit...   274   7e-72
ref|XP_003534484.1| PREDICTED: uncharacterized protein LOC100527...   274   9e-72

>ref|XP_002279626.1| PREDICTED: trafficking protein particle complex subunit 2-like
           protein [Vitis vinifera] gi|297744593|emb|CBI37855.3|
           unnamed protein product [Vitis vinifera]
          Length = 143

 Score =  280 bits (715), Expect = 2e-73
 Identities = 134/142 (94%), Positives = 140/142 (98%)
 Frame = +2

Query: 134 MIVCIAVVGHQNNPLYLQSFTEADDALKLHHIVHCSLDVIDERVNNPKKTGPTLNETFLG 313
           MIVC+AVVGHQNNPLY+QSFTEADDALKLHHIVHCSLDV+DERVNNPKK+GPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60

Query: 314 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 493
           LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 120

Query: 494 ITSRLFAERVSSIVKSFGFSTA 559
           ITSR FAERVS+IVKSFG S+A
Sbjct: 121 ITSRTFAERVSTIVKSFGLSSA 142


>ref|XP_004144858.1| PREDICTED: trafficking protein particle complex subunit 2-like
           protein-like [Cucumis sativus]
           gi|449519966|ref|XP_004167005.1| PREDICTED: trafficking
           protein particle complex subunit 2-like protein-like
           [Cucumis sativus]
          Length = 143

 Score =  275 bits (702), Expect = 6e-72
 Identities = 129/143 (90%), Positives = 141/143 (98%)
 Frame = +2

Query: 134 MIVCIAVVGHQNNPLYLQSFTEADDALKLHHIVHCSLDVIDERVNNPKKTGPTLNETFLG 313
           MIVC+AVVGHQNNPLY+QSFTEADDALKLHHIVHCSLDV+DERVNNP+K+GPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 314 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 493
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFH+AYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 494 ITSRLFAERVSSIVKSFGFSTAV 562
           ITS+ FAE VS+IVKSFGFS+A+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143


>ref|XP_002313700.1| predicted protein [Populus trichocarpa] gi|118482540|gb|ABK93191.1|
           unknown [Populus trichocarpa]
           gi|118483113|gb|ABK93465.1| unknown [Populus
           trichocarpa] gi|222850108|gb|EEE87655.1| predicted
           protein [Populus trichocarpa]
          Length = 143

 Score =  275 bits (702), Expect = 6e-72
 Identities = 132/142 (92%), Positives = 139/142 (97%)
 Frame = +2

Query: 134 MIVCIAVVGHQNNPLYLQSFTEADDALKLHHIVHCSLDVIDERVNNPKKTGPTLNETFLG 313
           MIVC+AVVGHQNNPLY+QSFTEADDALKLHHIVHCSLDV+DERVNNPKK+G TLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGLTLNETFLG 60

Query: 314 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 493
           LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFH+AYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 494 ITSRLFAERVSSIVKSFGFSTA 559
           ITSR FAERVS+IVKSFG S+A
Sbjct: 121 ITSRTFAERVSNIVKSFGLSSA 142


>ref|XP_003624261.1| Trafficking protein particle complex subunit 2-like protein
           [Medicago truncatula] gi|355499276|gb|AES80479.1|
           Trafficking protein particle complex subunit 2-like
           protein [Medicago truncatula]
          Length = 143

 Score =  274 bits (701), Expect = 7e-72
 Identities = 130/142 (91%), Positives = 139/142 (97%)
 Frame = +2

Query: 134 MIVCIAVVGHQNNPLYLQSFTEADDALKLHHIVHCSLDVIDERVNNPKKTGPTLNETFLG 313
           MIVC+AVVGHQNNPLY+QSFTEADDALKLHHIVHCSLDV+DERVNNPKK+GP LNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60

Query: 314 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 493
           LLYP ENYKVYGYLTNTKVKFILVTTD+DV+DADVRNFFRRFH+AYVDAVSNPFHVPGKK
Sbjct: 61  LLYPIENYKVYGYLTNTKVKFILVTTDIDVKDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 494 ITSRLFAERVSSIVKSFGFSTA 559
           ITSR FAERVS+IVKSFGFS+A
Sbjct: 121 ITSRTFAERVSTIVKSFGFSSA 142


>ref|XP_003534484.1| PREDICTED: uncharacterized protein LOC100527601 [Glycine max]
          Length = 143

 Score =  274 bits (700), Expect = 9e-72
 Identities = 131/142 (92%), Positives = 138/142 (97%)
 Frame = +2

Query: 134 MIVCIAVVGHQNNPLYLQSFTEADDALKLHHIVHCSLDVIDERVNNPKKTGPTLNETFLG 313
           MIVC+AVVGHQNNPLY+QSFTEADDALKLHHIVHCSLDV+DERVNNPKK+GP LNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60

Query: 314 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKK 493
           LLYP ENYKVYGYLTNTKVKFILVTTDLDV+DADVRNFFRRFHSAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPIENYKVYGYLTNTKVKFILVTTDLDVKDADVRNFFRRFHSAYVDAVSNPFHVPGKK 120

Query: 494 ITSRLFAERVSSIVKSFGFSTA 559
           ITSR FAERVS+IVKSFG S+A
Sbjct: 121 ITSRTFAERVSTIVKSFGLSSA 142


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