BLASTX nr result

ID: Coptis21_contig00011318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011318
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17911.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like...   525   e-146
ref|XP_002518315.1| APO protein 3, mitochondrial precursor, puta...   493   e-137
ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like...   490   e-136
ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   474   e-131

>emb|CBI17911.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  525 bits (1351), Expect = e-146
 Identities = 259/394 (65%), Positives = 308/394 (78%)
 Frame = +2

Query: 17   KVVSSRDVVIQSIVVKFGGIWKGWGPQVSFSTALSDASKCVELPKKLKGSERKPLVTGIN 196
            ++ + R +V+Q+       + K   P  SFST     S C ELP+KLK SERKP VT +N
Sbjct: 57   RIRNLRKIVVQNSFASLIELGKFKLPFRSFSTN----STCKELPRKLKKSERKPWVTSVN 112

Query: 197  VLKRRARLEKKIRQEVRETVPKPPENGLLVDKLIPVAHEVYNARSMLFTCVSKVMKSIPV 376
             LK +ARL+K+ RQEV E   +PPENGLLV  L+P AHEVY AR+ LFTCVS V+KS  +
Sbjct: 113  ELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTII 172

Query: 377  YTCGLCGEVHVGLQPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVESFHLYDRVGRAVS 556
            Y+C LCGEVHVG  P+KI++C V G+P+ KEH WE   VEHVLPLVESFHLYDR+GRAVS
Sbjct: 173  YSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAVS 232

Query: 557  HGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKVKDFEKMFPQFDSSGNDI 736
            H E L+VD+IPAIVELC+QAGLDIPEYPTRRRT PVY VAG++ DFE+ FP++DS G DI
Sbjct: 233  HNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGKDI 292

Query: 737  NGFGFWERHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLMQKYAVQTCGYCP 916
            N +GFWE+  +   ENKS+ L  DD+QG A+QGM+AWEKM  G  KLMQKYAVQTCGYC 
Sbjct: 293  NAYGFWEKRNQ-SSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCS 351

Query: 917  EVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDANGSNPVLDKLKR 1096
            EVQVGPKGHRVR CQA+KHQMRDGQHAWQEAT DDL+PPV+VWHV+D     P+++ L+R
Sbjct: 352  EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQR 411

Query: 1097 YYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVP 1198
            YYGKLPAVVELFAQAGA VGE+Y  +MR DVAVP
Sbjct: 412  YYGKLPAVVELFAQAGANVGENYVAMMREDVAVP 445


>ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
          Length = 481

 Score =  525 bits (1351), Expect = e-146
 Identities = 259/394 (65%), Positives = 308/394 (78%)
 Frame = +2

Query: 17   KVVSSRDVVIQSIVVKFGGIWKGWGPQVSFSTALSDASKCVELPKKLKGSERKPLVTGIN 196
            ++ + R +V+Q+       + K   P  SFST     S C ELP+KLK SERKP VT +N
Sbjct: 84   RIRNLRKIVVQNSFASLIELGKFKLPFRSFSTN----STCKELPRKLKKSERKPWVTSVN 139

Query: 197  VLKRRARLEKKIRQEVRETVPKPPENGLLVDKLIPVAHEVYNARSMLFTCVSKVMKSIPV 376
             LK +ARL+K+ RQEV E   +PPENGLLV  L+P AHEVY AR+ LFTCVS V+KS  +
Sbjct: 140  ELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTII 199

Query: 377  YTCGLCGEVHVGLQPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVESFHLYDRVGRAVS 556
            Y+C LCGEVHVG  P+KI++C V G+P+ KEH WE   VEHVLPLVESFHLYDR+GRAVS
Sbjct: 200  YSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAVS 259

Query: 557  HGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKVKDFEKMFPQFDSSGNDI 736
            H E L+VD+IPAIVELC+QAGLDIPEYPTRRRT PVY VAG++ DFE+ FP++DS G DI
Sbjct: 260  HNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGKDI 319

Query: 737  NGFGFWERHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLMQKYAVQTCGYCP 916
            N +GFWE+  +   ENKS+ L  DD+QG A+QGM+AWEKM  G  KLMQKYAVQTCGYC 
Sbjct: 320  NAYGFWEKRNQ-SSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCS 378

Query: 917  EVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDANGSNPVLDKLKR 1096
            EVQVGPKGHRVR CQA+KHQMRDGQHAWQEAT DDL+PPV+VWHV+D     P+++ L+R
Sbjct: 379  EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQR 438

Query: 1097 YYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVP 1198
            YYGKLPAVVELFAQAGA VGE+Y  +MR DVAVP
Sbjct: 439  YYGKLPAVVELFAQAGANVGENYVAMMREDVAVP 472


>ref|XP_002518315.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
            gi|223542535|gb|EEF44075.1| APO protein 3, mitochondrial
            precursor, putative [Ricinus communis]
          Length = 390

 Score =  493 bits (1269), Expect = e-137
 Identities = 230/364 (63%), Positives = 288/364 (79%)
 Frame = +2

Query: 107  STALSDASKCVELPKKLKGSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLV 286
            S   S  S  VELP+KLK SERKP VT +N LKR+AR E+K RQ VRE + +PPENGLLV
Sbjct: 18   SALYSTGSTYVELPRKLKKSERKPWVTSVNELKRKAREERKDRQLVRERILRPPENGLLV 77

Query: 287  DKLIPVAHEVYNARSMLFTCVSKVMKSIPVYTCGLCGEVHVGLQPNKIKSCIVPGNPSRK 466
             +LIPVAHEVY+AR  L +CVSKV++SI VY+C +CGEVHVG  P+KI++C V G+ + K
Sbjct: 78   KELIPVAHEVYSARMELLSCVSKVVESIAVYSCSVCGEVHVGHPPHKIRTCNVIGSQANK 137

Query: 467  EHRWEKASVEHVLPLVESFHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTR 646
            EH W    +E+VLPLVESFHLYDR+GRAVSH E ++VDRIPAI+ELC+Q G++IPEYPTR
Sbjct: 138  EHMWNIGGMENVLPLVESFHLYDRLGRAVSHNERIQVDRIPAIMELCIQGGVNIPEYPTR 197

Query: 647  RRTIPVYIVAGKVKDFEKMFPQFDSSGNDINGFGFWERHEKPGRENKSLDLPLDDLQGVA 826
            RR  P Y VAG++ DFE+ FP+ D+ G  IN  GFWER  K  + ++ +D   D LQG+A
Sbjct: 198  RRAFPAYSVAGRIMDFERRFPKEDAPGKGINTNGFWERRNKSSKHDEPMDFHSDGLQGIA 257

Query: 827  VQGMKAWEKMRSGTLKLMQKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQE 1006
            ++GM+AW+K+++G  +LM+KYAV TCGYCPEVQVGPKGH+VR CQA+KHQMRDGQHAWQ+
Sbjct: 258  IRGMEAWKKLQTGATELMRKYAVHTCGYCPEVQVGPKGHKVRNCQAYKHQMRDGQHAWQQ 317

Query: 1007 ATFDDLVPPVYVWHVQDANGSNPVLDKLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGD 1186
            AT +DLVPPVYVWHV+D     P+++ LKRYYG LPAV+ELFAQAGA V + Y+ +MR D
Sbjct: 318  ATVNDLVPPVYVWHVRDQQSGEPLVNNLKRYYGMLPAVLELFAQAGAHVSDDYAGLMRED 377

Query: 1187 VAVP 1198
            V VP
Sbjct: 378  VTVP 381


>ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 404

 Score =  490 bits (1261), Expect = e-136
 Identities = 242/398 (60%), Positives = 291/398 (73%)
 Frame = +2

Query: 5    RRIGKVVSSRDVVIQSIVVKFGGIWKGWGPQVSFSTALSDASKCVELPKKLKGSERKPLV 184
            R +  + S  + V+Q  V +  GI         F    S  S C ELP+KL   ERKP V
Sbjct: 4    RHVQTIGSLLERVMQVHVAQLRGI------NTHFCLWYSSVSTCNELPRKLNKYERKPPV 57

Query: 185  TGINVLKRRARLEKKIRQEVRETVPKPPENGLLVDKLIPVAHEVYNARSMLFTCVSKVMK 364
            T  N LKR+ARLE+K RQ+V E   +PPENGLLV+ LIP+AHEVY AR  L + VS+++ 
Sbjct: 58   TSFNELKRQARLERKERQKVHENKLQPPENGLLVEHLIPIAHEVYAARCELISTVSRLVN 117

Query: 365  SIPVYTCGLCGEVHVGLQPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVESFHLYDRVG 544
             I +YTC LCGEVHVG  P++I++C V G+PS KEH W K  VEHVLPLVESFHLYDR+G
Sbjct: 118  YIAIYTCSLCGEVHVGHPPHQIRTCDVRGSPSSKEHSWVKGGVEHVLPLVESFHLYDRIG 177

Query: 545  RAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKVKDFEKMFPQFDSS 724
            RAVSH E LEVDRIPAIVELC+QAG DIPEYPTRRR+ PVY VAG++ DFEK FP+  S 
Sbjct: 178  RAVSHNEMLEVDRIPAIVELCIQAGFDIPEYPTRRRSFPVYCVAGRIIDFEKRFPKEISL 237

Query: 725  GNDINGFGFWERHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLMQKYAVQTC 904
            G DI   GFW + ++      S+ +  DD+Q +AV+GMKAWEKM  G  KLM+KYAVQTC
Sbjct: 238  GEDIEAHGFWFKKKRVDVNTNSMAMQSDDIQAIAVRGMKAWEKMHGGASKLMEKYAVQTC 297

Query: 905  GYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDANGSNPVLD 1084
            GYCPEVQVGPKGHR R CQAFKHQMRDGQHAWQEA  DDL PPVYV+H++D     P+++
Sbjct: 298  GYCPEVQVGPKGHRGRNCQAFKHQMRDGQHAWQEARIDDLAPPVYVFHIRDDQPRKPLVN 357

Query: 1085 KLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVP 1198
            +LK+YYG LPAVVELFAQAGA V + Y+ +MR DV +P
Sbjct: 358  ELKKYYGMLPAVVELFAQAGAPVDKSYACMMREDVVIP 395


>ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 3, mitochondrial-like
            [Glycine max]
          Length = 363

 Score =  474 bits (1221), Expect = e-131
 Identities = 233/357 (65%), Positives = 273/357 (76%)
 Frame = +2

Query: 128  SKCVELPKKLKGSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLVDKLIPVA 307
            S C ELP+KL  SERKP VT  N LKR+ARL+KK RQ+V E   +PPENGLLVD LIP+A
Sbjct: 2    STCNELPRKLNKSERKPPVTSFNDLKRQARLKKKERQKVHENTLQPPENGLLVDHLIPIA 61

Query: 308  HEVYNARSMLFTCVSKVMKSIPVYTCGLCGEVHVGLQPNKIKSCIVPGNPSRKEHRWEKA 487
            HEVY AR  L + VS ++    +YTC LCGEVHVG  P+KI++C V G+PS KEH W K 
Sbjct: 62   HEVYAARCELISSVSTLVNYTAIYTCSLCGEVHVGHAPHKIRTCDVRGSPSSKEHSWAKV 121

Query: 488  SVEHVLPLVESFHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVY 667
             VEHVLPLV+SFHLYDR+GRAVSH E LEVDRIPAIVELCVQAG++IPEYPTRRR+ PVY
Sbjct: 122  GVEHVLPLVDSFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGINIPEYPTRRRSSPVY 181

Query: 668  IVAGKVKDFEKMFPQFDSSGNDINGFGFWERHEKPGRENKSLDLPLDDLQGVAVQGMKAW 847
             VAG++ DFEK FP+  S G DI   GFW           S+ +  DD+Q  AV+GMKAW
Sbjct: 182  TVAGRIIDFEKRFPKEISLGEDIEAHGFWLMDV----NTNSMAMQSDDIQATAVRGMKAW 237

Query: 848  EKMRSGTLKLMQKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLV 1027
            EKMR G  KLM KYAVQTCGY PEVQVGPKGHRVR CQAFKHQ+RDGQ AW  AT DDL 
Sbjct: 238  EKMRGGASKLMGKYAVQTCGYYPEVQVGPKGHRVRNCQAFKHQIRDGQRAWXGATIDDLA 297

Query: 1028 PPVYVWHVQDANGSNPVLDKLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVP 1198
            PPVYV+H++D     P++++LKRYYG LPAVVELFAQAGA V ++Y+++MR DV +P
Sbjct: 298  PPVYVYHIRDDQHRKPLVNELKRYYGMLPAVVELFAQAGAPVDKNYASMMREDVVIP 354


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