BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011317
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-bi...   631   e-178
ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subun...   606   e-171
emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]   606   e-171
emb|CBI16961.3| unnamed protein product [Vitis vinifera]              604   e-170
ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   600   e-169

>ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Vitis vinifera]
          Length = 685

 Score =  631 bits (1628), Expect = e-178
 Identities = 330/449 (73%), Positives = 357/449 (79%), Gaps = 21/449 (4%)
 Frame = +1

Query: 1    RGDRGYYQAINLCPTCKTAYYFRPHKLLPLQGTFAEIGRIXXXXXXXXXXXXXXXXVSNS 180
            +G  G YQA+NLCP CKTAYYFRP+K+ PLQG+F EIGR                   +S
Sbjct: 111  KGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRSDYNNTNTNHPKGKDNEKKSS 170

Query: 181  T-----EDDFSNRLRVSFWETLRSYGGDPPHEXXXXXXXXXXXXLAVHTXXXXXXXXXLN 345
                  E+D+ +RLR+SFWETLRSYGGDPP              LAVH          +N
Sbjct: 171  KNGGGHEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPSGNGLAVHAPPGPPFAPGVN 230

Query: 346  VVRAPN----------------AQKNGWGGSNLGKDLPTPKQICKGLDKFVIGQQRAKKV 477
            V+RA                   ++NGWGGSNLGKDLPTPK+ICKGLDKFVIGQ+RAKKV
Sbjct: 231  VIRAAGPGVGGNGGGGGGNGSFGERNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKV 290

Query: 478  LSVAVYNHYKRIYHGSLHKGGAAESENVDVQIDENDLVELEKSNVLLMGPTGSGKTLLAK 657
            LSVAVYNHYKRIYHGSL KG  AES   +V   ++D VELEKSNVLLMGPTGSGKTLLAK
Sbjct: 291  LSVAVYNHYKRIYHGSLQKGSGAESGTSEV---DDDSVELEKSNVLLMGPTGSGKTLLAK 347

Query: 658  TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKIT 837
            TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL  AEFNVQAAQQG+VYIDEVDKIT
Sbjct: 348  TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKIT 407

Query: 838  KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGA 1017
            KKAESLN+SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGA
Sbjct: 408  KKAESLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGA 467

Query: 1018 FIDLEKTISERRQDSSIGFGAPVRTNMRSGGLTNAVVASCLLESVESGDLIAYGLIPEFI 1197
            F+DLEKTIS+RRQDSSIGFGAPVR NMR+GGLTNAVV S LLESVES DLIAYGLIPEFI
Sbjct: 468  FVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFI 527

Query: 1198 GRFPVLVSLSALNEEQLVQVLTEPKNALG 1284
            GRFP+LVSLSAL E+QLV+VLTEPKNALG
Sbjct: 528  GRFPILVSLSALTEDQLVKVLTEPKNALG 556


>ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
            [Ricinus communis] gi|223541002|gb|EEF42560.1|
            ATP-dependent clp protease ATP-binding subunit clpx,
            putative [Ricinus communis]
          Length = 698

 Score =  606 bits (1563), Expect = e-171
 Identities = 326/448 (72%), Positives = 349/448 (77%), Gaps = 26/448 (5%)
 Frame = +1

Query: 19   YQAINLCPTCKTAYYFRPHKLLPLQGTFAEIGRIXXXXXXXXXXXXXXXXVSN--STED- 189
            YQA+N CP+CKTAYYFRP+K+ PLQG+F EIGR+                     STED 
Sbjct: 125  YQAVNFCPSCKTAYYFRPYKITPLQGSFIEIGRVGNNSPNNKSRNRIGSLTKQHPSTEDL 184

Query: 190  -------DFSNRLRVSFWETLRSYGGDPPHEXXXXXXXXXXXXLAVHTXXXXXXXXXLNV 348
                     S RLR SFW TLRSY GDPP              LAVHT         +NV
Sbjct: 185  EEGFDSNAISGRLRASFWNTLRSYAGDPPENWPPPPLNGNG--LAVHTPPGPPFAPGVNV 242

Query: 349  VRAPN----------AQKNG------WGGSNLGKDLPTPKQICKGLDKFVIGQQRAKKVL 480
            +RA             +K+G      WGGSNLGKDLPTPK+IC+GLDKFVIGQ RAKKVL
Sbjct: 243  IRANGPGGGGGGEGGGEKSGGGGGGGWGGSNLGKDLPTPKEICRGLDKFVIGQDRAKKVL 302

Query: 481  SVAVYNHYKRIYHGSLHKGGAAESENVDVQIDENDLVELEKSNVLLMGPTGSGKTLLAKT 660
            SVAVYNHYKRIYH SL KG   ES + D  +D++D VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 303  SVAVYNHYKRIYHASLKKGPGEESGSSDA-VDDDDNVELEKSNVLLMGPTGSGKTLLAKT 361

Query: 661  LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITK 840
            LARFVNVPFVIADAT LTQAGYVGEDVESILYKLL+ AEFNVQAAQQGIVYIDEVDKITK
Sbjct: 362  LARFVNVPFVIADATALTQAGYVGEDVESILYKLLSVAEFNVQAAQQGIVYIDEVDKITK 421

Query: 841  KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 1020
            KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF
Sbjct: 422  KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 481

Query: 1021 IDLEKTISERRQDSSIGFGAPVRTNMRSGGLTNAVVASCLLESVESGDLIAYGLIPEFIG 1200
            +DLEKTISERRQDSSIGFGAPVR NMR+GG+TNA V S LLESVES DLIAYGLIPEFIG
Sbjct: 482  VDLEKTISERRQDSSIGFGAPVRANMRAGGVTNAAVTSSLLESVESADLIAYGLIPEFIG 541

Query: 1201 RFPVLVSLSALNEEQLVQVLTEPKNALG 1284
            RFP+LVSLSAL E+QLV+VLTEPKNALG
Sbjct: 542  RFPILVSLSALTEDQLVRVLTEPKNALG 569


>emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
          Length = 730

 Score =  606 bits (1562), Expect = e-171
 Identities = 330/493 (66%), Positives = 357/493 (72%), Gaps = 65/493 (13%)
 Frame = +1

Query: 1    RGDRGYYQAINLCPTCKTAYYFRPHKLLPLQGTFAEIGRIXXXXXXXXXXXXXXXXVSNS 180
            +G  G YQA+NLCP CKTAYYFRP+K+ PLQG+F EIGR                   +S
Sbjct: 111  KGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRSDYNNTNTNHPKGKDNEKKSS 170

Query: 181  T-----EDDFSNRLRVSFWETLRSYGGDPPHEXXXXXXXXXXXXLAVHTXXXXXXXXXLN 345
                  E+D+ +RLR+SFWETLRSYGGDPP              LAVH          +N
Sbjct: 171  KNGGGHEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPSGNGLAVHAPPGPPFAPGVN 230

Query: 346  VVRAPN----------------AQKNGWGGSNLGKDLPTPKQICKGLDKFVIGQQRAKK- 474
            V+RA                   ++NGWGGSNLGKDLPTPK+ICKGLDKFVIGQ+RAKK 
Sbjct: 231  VIRAAGPGVGGNGGGGGGNGSFGERNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKF 290

Query: 475  ---------------------------VLSVAVYNHYKRIYHGSLHKGGAAESENVDVQI 573
                                       VLSVAVYNHYKRIYHGSL KG  AES   +V  
Sbjct: 291  SGIEVYIVEIGKWGHSFKRSNWCQTWEVLSVAVYNHYKRIYHGSLQKGSGAESGTSEV-- 348

Query: 574  DENDLVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 753
             ++D VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 349  -DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 407

Query: 754  YKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT---- 921
            YKLL  AEFNVQAAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT    
Sbjct: 408  YKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTDLKW 467

Query: 922  ------------IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSS 1065
                        IVNVPEKGARKHPRGDNIQIDTKDILFICGGAF+DLEKTIS+RRQDSS
Sbjct: 468  SGYKILRGIKQXIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSS 527

Query: 1066 IGFGAPVRTNMRSGGLTNAVVASCLLESVESGDLIAYGLIPEFIGRFPVLVSLSALNEEQ 1245
            IGFGAPVR NMR+GGLTNAVV S LLESVES DLIAYGLIPEFIGRFP+LVSLSAL E+Q
Sbjct: 528  IGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQ 587

Query: 1246 LVQVLTEPKNALG 1284
            LV+VLTEPKNALG
Sbjct: 588  LVKVLTEPKNALG 600


>emb|CBI16961.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  604 bits (1557), Expect = e-170
 Identities = 322/448 (71%), Positives = 345/448 (77%), Gaps = 20/448 (4%)
 Frame = +1

Query: 1    RGDRGYYQAINLCPTCKTAYYFRPHKLLPLQGTFAEIGRIXXXXXXXXXXXXXXXXVSNS 180
            +G  G YQA+NLCP CKTAYYFRP+K+ PLQG+F EIG                      
Sbjct: 26   KGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGSKN----------------GGG 69

Query: 181  TEDDFSNRLRVSFWETLRSYGGDPPHEXXXXXXXXXXXXLAVHTXXXXXXXXXLNVVRAP 360
             E+D+ +RLR+SFWETLRSYGGDPP              LA                   
Sbjct: 70   HEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPSGNGLA------------------- 110

Query: 361  NAQKNGWGGSNLGKDLPTPKQICKGLDKFVIGQQRAKK--------------------VL 480
               +NGWGGSNLGKDLPTPK+ICKGLDKFVIGQ+RAKK                    VL
Sbjct: 111  ---RNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKLDFIPFSDFLVRSNWCQTWEVL 167

Query: 481  SVAVYNHYKRIYHGSLHKGGAAESENVDVQIDENDLVELEKSNVLLMGPTGSGKTLLAKT 660
            SVAVYNHYKRIYHGSL KG  AES   +V   ++D VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 168  SVAVYNHYKRIYHGSLQKGSGAESGTSEV---DDDSVELEKSNVLLMGPTGSGKTLLAKT 224

Query: 661  LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITK 840
            LARFVNVPFVIADATTLTQAGYVGEDVESILYKLL  AEFNVQAAQQG+VYIDEVDKITK
Sbjct: 225  LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITK 284

Query: 841  KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 1020
            KAESLN+SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF
Sbjct: 285  KAESLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 344

Query: 1021 IDLEKTISERRQDSSIGFGAPVRTNMRSGGLTNAVVASCLLESVESGDLIAYGLIPEFIG 1200
            +DLEKTIS+RRQDSSIGFGAPVR NMR+GGLTNAVV S LLESVES DLIAYGLIPEFIG
Sbjct: 345  VDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIG 404

Query: 1201 RFPVLVSLSALNEEQLVQVLTEPKNALG 1284
            RFP+LVSLSAL E+QLV+VLTEPKNALG
Sbjct: 405  RFPILVSLSALTEDQLVKVLTEPKNALG 432


>ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Cucumis sativus] gi|449510687|ref|XP_004163734.1|
            PREDICTED: ATP-dependent Clp protease ATP-binding subunit
            ClpX-like [Cucumis sativus]
          Length = 699

 Score =  600 bits (1548), Expect = e-169
 Identities = 321/448 (71%), Positives = 351/448 (78%), Gaps = 21/448 (4%)
 Frame = +1

Query: 4    GDRGYYQAINLCPTCKTAYYFRPHKLLPLQGTFAEIGRIXXXXXXXXXXXXXXXXVSN-- 177
            G R  Y+A+NLCP CKTAYYFRP+K+ PLQG+F EIG +                     
Sbjct: 128  GGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIGNLNSKPKNSSERRITTKDGKGNA 187

Query: 178  ----STEDDFSNRLRVSFWETLRSYGGDPPHEXXXXXXXXXXXXLAVHTXXXXXXXXXLN 345
                S E+  +NRLRVSF+ET RS+GG+PP              LAVH+         +N
Sbjct: 188  IAGFSDENYVNNRLRVSFFETARSFGGEPPENWPPGPPPVNG--LAVHSPPGPPFAPGVN 245

Query: 346  VVRA--PNA-------------QKNGWGGSNLGKDLPTPKQICKGLDKFVIGQQRAKKVL 480
             VRA  PN              +KN WGGSNLGKDLPTPK+ICKGLDKFVIGQ++AKKVL
Sbjct: 246  FVRATGPNGSTSGSGGNGAGDGKKNEWGGSNLGKDLPTPKEICKGLDKFVIGQEKAKKVL 305

Query: 481  SVAVYNHYKRIYHGSLHKGGAAESENVDVQIDENDLVELEKSNVLLMGPTGSGKTLLAKT 660
            SVAV+NHYKRIYH SL KG   ES   D  +D++D VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 306  SVAVHNHYKRIYHASLQKGSGNESGTQDT-VDDDDSVELEKSNVLLMGPTGSGKTLLAKT 364

Query: 661  LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITK 840
            LARFVNVPFV+ADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQG++YIDEVDKITK
Sbjct: 365  LARFVNVPFVLADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMIYIDEVDKITK 424

Query: 841  KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 1020
            KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG+RKHPRGDNIQIDTKDILFICGGAF
Sbjct: 425  KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGSRKHPRGDNIQIDTKDILFICGGAF 484

Query: 1021 IDLEKTISERRQDSSIGFGAPVRTNMRSGGLTNAVVASCLLESVESGDLIAYGLIPEFIG 1200
            +DLEKTIS+RRQDSSIGFGAPVR NMR GG T+A V S LLESVES DLIAYGLIPEFIG
Sbjct: 485  VDLEKTISDRRQDSSIGFGAPVRANMRIGGATSAAVTSSLLESVESSDLIAYGLIPEFIG 544

Query: 1201 RFPVLVSLSALNEEQLVQVLTEPKNALG 1284
            RFP+LVSL AL E+QLVQVLTEPKNALG
Sbjct: 545  RFPILVSLLALTEDQLVQVLTEPKNALG 572