BLASTX nr result
ID: Coptis21_contig00011313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011313 (358 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein 111 7e-28 gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK225... 108 2e-26 ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li... 111 2e-26 emb|CBI37645.3| unnamed protein product [Vitis vinifera] 111 2e-26 gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil] 111 2e-26 >sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein Length = 144 Score = 111 bits (277), Expect(2) = 7e-28 Identities = 52/65 (80%), Positives = 58/65 (89%) Frame = -2 Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178 FVFMEDFRK++KEKHPNNKSV+VVGKAGGDKWK ++ AEKAPF +KAEKRK EY K LQA Sbjct: 44 FVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQA 103 Query: 177 YNDKQ 163 YN KQ Sbjct: 104 YNKKQ 108 Score = 37.7 bits (86), Expect(2) = 7e-28 Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = -1 Query: 169 QANGGDEEDGSDKSKSEVNDDDH-EEASGE 83 QA G EE+ SDKS+SEVNDDD ++ SGE Sbjct: 108 QAAGAAEEEESDKSRSEVNDDDEDQDGSGE 137 >gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis] gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis] gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis] gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis] gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis] gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis] gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis] gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis] gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis] Length = 157 Score = 108 bits (270), Expect(2) = 2e-26 Identities = 52/65 (80%), Positives = 59/65 (90%) Frame = -2 Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178 FVFMEDFRK++KEK+PN KSVSVVGKAGGDKWKSMSEA+KAP+ AKA KRKTEY K + A Sbjct: 60 FVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMAA 119 Query: 177 YNDKQ 163 YN+KQ Sbjct: 120 YNNKQ 124 Score = 35.8 bits (81), Expect(2) = 2e-26 Identities = 18/28 (64%), Positives = 21/28 (75%) Frame = -1 Query: 166 ANGGDEEDGSDKSKSEVNDDDHEEASGE 83 + GD + SDKSKSEVND+D EE SGE Sbjct: 126 STAGDSAEESDKSKSEVNDEDDEE-SGE 152 >ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis vinifera] Length = 156 Score = 111 bits (278), Expect(2) = 2e-26 Identities = 52/64 (81%), Positives = 58/64 (90%) Frame = -2 Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178 FVFME+FRK +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEY K +QA Sbjct: 55 FVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQA 114 Query: 177 YNDK 166 YN + Sbjct: 115 YNKR 118 Score = 32.7 bits (73), Expect(2) = 2e-26 Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 1/24 (4%) Frame = -1 Query: 151 EEDGSDKSKSEVNDDDH-EEASGE 83 EE+ SDKS+SEVNDD+ E+ SGE Sbjct: 127 EEEESDKSRSEVNDDEEDEDESGE 150 >emb|CBI37645.3| unnamed protein product [Vitis vinifera] Length = 154 Score = 111 bits (278), Expect(2) = 2e-26 Identities = 52/64 (81%), Positives = 58/64 (90%) Frame = -2 Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178 FVFME+FRK +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEY K +QA Sbjct: 53 FVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQA 112 Query: 177 YNDK 166 YN + Sbjct: 113 YNKR 116 Score = 32.7 bits (73), Expect(2) = 2e-26 Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 1/24 (4%) Frame = -1 Query: 151 EEDGSDKSKSEVNDDDH-EEASGE 83 EE+ SDKS+SEVNDD+ E+ SGE Sbjct: 125 EEEESDKSRSEVNDDEEDEDESGE 148 >gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil] Length = 146 Score = 111 bits (277), Expect(2) = 2e-26 Identities = 51/65 (78%), Positives = 58/65 (89%) Frame = -2 Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178 FVFMEDFRK++KEKHPNNKSV+ VGKAGGDKWK +++AEKAPF AKAEKRK EY K +QA Sbjct: 44 FVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQA 103 Query: 177 YNDKQ 163 YN KQ Sbjct: 104 YNRKQ 108 Score = 32.7 bits (73), Expect(2) = 2e-26 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -1 Query: 169 QANGGDEEDGSDKSKSEVNDDDHEE 95 QA +E+ SDKS+SEVNDD+ +E Sbjct: 108 QAGEAADEEESDKSRSEVNDDEEDE 132