BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011313
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein              111   7e-28
gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK225...   108   2e-26
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   111   2e-26
emb|CBI37645.3| unnamed protein product [Vitis vinifera]              111   2e-26
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       111   2e-26

>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
          Length = 144

 Score =  111 bits (277), Expect(2) = 7e-28
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = -2

Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178
           FVFMEDFRK++KEKHPNNKSV+VVGKAGGDKWK ++ AEKAPF +KAEKRK EY K LQA
Sbjct: 44  FVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQA 103

Query: 177 YNDKQ 163
           YN KQ
Sbjct: 104 YNKKQ 108



 Score = 37.7 bits (86), Expect(2) = 7e-28
 Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = -1

Query: 169 QANGGDEEDGSDKSKSEVNDDDH-EEASGE 83
           QA G  EE+ SDKS+SEVNDDD  ++ SGE
Sbjct: 108 QAAGAAEEEESDKSRSEVNDDDEDQDGSGE 137


>gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK22556.1| unknown
           [Picea sitchensis] gi|116782678|gb|ABK22606.1| unknown
           [Picea sitchensis] gi|116782786|gb|ABK22657.1| unknown
           [Picea sitchensis] gi|116782898|gb|ABK22712.1| unknown
           [Picea sitchensis] gi|116791878|gb|ABK26144.1| unknown
           [Picea sitchensis] gi|148907501|gb|ABR16881.1| unknown
           [Picea sitchensis] gi|224284566|gb|ACN40016.1| unknown
           [Picea sitchensis] gi|224285212|gb|ACN40332.1| unknown
           [Picea sitchensis] gi|224286734|gb|ACN41070.1| unknown
           [Picea sitchensis]
          Length = 157

 Score =  108 bits (270), Expect(2) = 2e-26
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -2

Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178
           FVFMEDFRK++KEK+PN KSVSVVGKAGGDKWKSMSEA+KAP+ AKA KRKTEY K + A
Sbjct: 60  FVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMAA 119

Query: 177 YNDKQ 163
           YN+KQ
Sbjct: 120 YNNKQ 124



 Score = 35.8 bits (81), Expect(2) = 2e-26
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -1

Query: 166 ANGGDEEDGSDKSKSEVNDDDHEEASGE 83
           +  GD  + SDKSKSEVND+D EE SGE
Sbjct: 126 STAGDSAEESDKSKSEVNDEDDEE-SGE 152


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  111 bits (278), Expect(2) = 2e-26
 Identities = 52/64 (81%), Positives = 58/64 (90%)
 Frame = -2

Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178
           FVFME+FRK +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEY K +QA
Sbjct: 55  FVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQA 114

Query: 177 YNDK 166
           YN +
Sbjct: 115 YNKR 118



 Score = 32.7 bits (73), Expect(2) = 2e-26
 Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -1

Query: 151 EEDGSDKSKSEVNDDDH-EEASGE 83
           EE+ SDKS+SEVNDD+  E+ SGE
Sbjct: 127 EEEESDKSRSEVNDDEEDEDESGE 150


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  111 bits (278), Expect(2) = 2e-26
 Identities = 52/64 (81%), Positives = 58/64 (90%)
 Frame = -2

Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178
           FVFME+FRK +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEY K +QA
Sbjct: 53  FVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQA 112

Query: 177 YNDK 166
           YN +
Sbjct: 113 YNKR 116



 Score = 32.7 bits (73), Expect(2) = 2e-26
 Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -1

Query: 151 EEDGSDKSKSEVNDDDH-EEASGE 83
           EE+ SDKS+SEVNDD+  E+ SGE
Sbjct: 125 EEEESDKSRSEVNDDEEDEDESGE 148


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  111 bits (277), Expect(2) = 2e-26
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -2

Query: 357 FVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYTKILQA 178
           FVFMEDFRK++KEKHPNNKSV+ VGKAGGDKWK +++AEKAPF AKAEKRK EY K +QA
Sbjct: 44  FVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQA 103

Query: 177 YNDKQ 163
           YN KQ
Sbjct: 104 YNRKQ 108



 Score = 32.7 bits (73), Expect(2) = 2e-26
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -1

Query: 169 QANGGDEEDGSDKSKSEVNDDDHEE 95
           QA    +E+ SDKS+SEVNDD+ +E
Sbjct: 108 QAGEAADEEESDKSRSEVNDDEEDE 132