BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011310
         (1346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   223   9e-56
ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab...   197   4e-48
ref|XP_002520546.1| conserved hypothetical protein [Ricinus comm...   196   9e-48
ref|NP_193700.2| Mitochondrial transcription termination factor ...   196   1e-47
dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]           196   1e-47

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  223 bits (568), Expect = 9e-56
 Identities = 105/156 (67%), Positives = 129/156 (82%)
 Frame = +3

Query: 63  MEKTAFLLSIGYVENSEEMVKAMKRFRGRGDQLQQRFDCLVKAGLDCHAVSNMVKAVPTV 242
           +EKT FLL +GYVENS+EM KA+K FRGRGDQLQ+RFDCLV+AGLDC+ VSNM+K  P+V
Sbjct: 409 LEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQAPSV 468

Query: 243 LNLSKHLLEMKIEYLVKDLGYPLQSLEVFPTYLCYDIEKIRRRCSMYMWLRENGLENSRK 422
           LN +K+++E KI+ L   LGYPLQS+  FP+YLCYDIE+I  R SMY+WLR+ G   S  
Sbjct: 469 LNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAAKSNL 528

Query: 423 ALSTILATCDARFVKHFVNVHPEGPAEWERLKKPLP 530
           +LSTILA  DARFVK+FV+VHPEGPA+WERL+K LP
Sbjct: 529 SLSTILACSDARFVKYFVDVHPEGPAQWERLRKSLP 564


>ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
           lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein
           ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  197 bits (502), Expect = 4e-48
 Identities = 96/164 (58%), Positives = 125/164 (76%)
 Frame = +3

Query: 30  KKVAVEKRLYGMEKTAFLLSIGYVENSEEMVKAMKRFRGRGDQLQQRFDCLVKAGLDCHA 209
           K ++ + R Y +EKTAFLL +GYVENS+EMVKA+K+FRGRGDQLQ+RFDCLVKAGL+ + 
Sbjct: 385 KPLSEDSRKY-LEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNV 443

Query: 210 VSNMVKAVPTVLNLSKHLLEMKIEYLVKDLGYPLQSLEVFPTYLCYDIEKIRRRCSMYMW 389
           V+ +++  P +LNLSK ++E KI  L + LGYP++SL  FP YLCYD+++I  R SMY+W
Sbjct: 444 VTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLW 503

Query: 390 LRENGLENSRKALSTILATCDARFVKHFVNVHPEGPAEWERLKK 521
           LRE        + STIL   DARFVK+FVNVHPEGPA WE + +
Sbjct: 504 LRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQ 547


>ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
           gi|223540260|gb|EEF41832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  196 bits (499), Expect = 9e-48
 Identities = 89/151 (58%), Positives = 120/151 (79%)
 Frame = +3

Query: 66  EKTAFLLSIGYVENSEEMVKAMKRFRGRGDQLQQRFDCLVKAGLDCHAVSNMVKAVPTVL 245
           +K AFLL +GYVENS+EM++A+K+FRGRGDQLQ+R+DCLV+AGLDC+ VS++++  P VL
Sbjct: 218 DKVAFLLRLGYVENSDEMMRALKKFRGRGDQLQERYDCLVQAGLDCNVVSSLIRHAPMVL 277

Query: 246 NLSKHLLEMKIEYLVKDLGYPLQSLEVFPTYLCYDIEKIRRRCSMYMWLRENGLENSRKA 425
           N +K ++E KI+ L + LGYPL S+  FPTYLCYDIE+I  R  MY+WL++ G      +
Sbjct: 278 NQTKDVIEKKIDCLTRCLGYPLTSVVAFPTYLCYDIERINHRFRMYVWLKDRGAAKPMLS 337

Query: 426 LSTILATCDARFVKHFVNVHPEGPAEWERLK 518
           LSTILA  DARF K+FV++HPEGPA W+ L+
Sbjct: 338 LSTILACSDARFEKYFVDIHPEGPAVWKSLQ 368


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score =  196 bits (498), Expect = 1e-47
 Identities = 95/164 (57%), Positives = 124/164 (75%)
 Frame = +3

Query: 30  KKVAVEKRLYGMEKTAFLLSIGYVENSEEMVKAMKRFRGRGDQLQQRFDCLVKAGLDCHA 209
           K ++ + R Y +EKT FLL +GYVENS+EMVKA+K+FRGRGDQLQ+RFDCLVKAGL+ + 
Sbjct: 410 KPLSEDSRKY-LEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNV 468

Query: 210 VSNMVKAVPTVLNLSKHLLEMKIEYLVKDLGYPLQSLEVFPTYLCYDIEKIRRRCSMYMW 389
           V+ +++  P +LNLSK ++E KI  L + LGYP++SL  FP YLCYD+++I  R SMY+W
Sbjct: 469 VTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLW 528

Query: 390 LRENGLENSRKALSTILATCDARFVKHFVNVHPEGPAEWERLKK 521
           LRE        + STIL   DARFVK+FVNVHPEGPA WE + +
Sbjct: 529 LRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQ 572


>dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]
          Length = 346

 Score =  196 bits (498), Expect = 1e-47
 Identities = 95/164 (57%), Positives = 124/164 (75%)
 Frame = +3

Query: 30  KKVAVEKRLYGMEKTAFLLSIGYVENSEEMVKAMKRFRGRGDQLQQRFDCLVKAGLDCHA 209
           K ++ + R Y +EKT FLL +GYVENS+EMVKA+K+FRGRGDQLQ+RFDCLVKAGL+ + 
Sbjct: 181 KPLSEDSRKY-LEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNV 239

Query: 210 VSNMVKAVPTVLNLSKHLLEMKIEYLVKDLGYPLQSLEVFPTYLCYDIEKIRRRCSMYMW 389
           V+ +++  P +LNLSK ++E KI  L + LGYP++SL  FP YLCYD+++I  R SMY+W
Sbjct: 240 VTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLW 299

Query: 390 LRENGLENSRKALSTILATCDARFVKHFVNVHPEGPAEWERLKK 521
           LRE        + STIL   DARFVK+FVNVHPEGPA WE + +
Sbjct: 300 LRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQ 343