BLASTX nr result

ID: Coptis21_contig00011303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011303
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220...   318   2e-84
ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 com...   317   3e-84
ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 com...   313   6e-83
ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81
ref|XP_002453669.1| hypothetical protein SORBIDRAFT_04g010120 [S...   301   2e-79

>ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220963 [Cucumis sativus]
            gi|449479251|ref|XP_004155549.1| PREDICTED:
            uncharacterized protein LOC101229737 [Cucumis sativus]
          Length = 248

 Score =  318 bits (814), Expect = 2e-84
 Identities = 153/205 (74%), Positives = 175/205 (85%)
 Frame = -2

Query: 1027 LHKEVIFTSLHKRGTLGFCRYSKFATGYEPLQKKALDSIIDIERAKHLSDKELVSVWDDY 848
            L KE   +   K  +LGF R SKFATG+ PLQ K LDSIID+ERAK  S ++L S+WDDY
Sbjct: 43   LQKETNPSDFLKWSSLGFFRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDY 102

Query: 847  HLGRGHIGASMKAKLYRLLEQRAISCRHFVIPLWRGSGYTTFFVQVQMPCVLFTGLEDYK 668
            HLGRGHIG SMKAKLY LLEQRA  CR+FVIPLWRGSGYTT FVQVQ P ++FTGLEDYK
Sbjct: 103  HLGRGHIGISMKAKLYHLLEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYK 162

Query: 667  AKGTQAAPYFTATYYTEFEENKDVVLIRGDVVFTSKLTDTEAQWLLETAQSFYLNDVRYK 488
            A+GTQAAPYFT +YY EF E+KD+VLIRGD+VFTSKLTD EA+WLLET QSFYLNDVRYK
Sbjct: 163  ARGTQAAPYFTVSYYKEFAESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYK 222

Query: 487  LVERFNKETREFEFRDVLQALEMPM 413
            LVERFN++TR+FEF+DVLQAL+MP+
Sbjct: 223  LVERFNRQTRDFEFKDVLQALDMPI 247


>ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
            [Vitis vinifera] gi|297740461|emb|CBI30643.3| unnamed
            protein product [Vitis vinifera]
          Length = 245

 Score =  317 bits (813), Expect = 3e-84
 Identities = 161/251 (64%), Positives = 197/251 (78%), Gaps = 3/251 (1%)
 Frame = -2

Query: 1156 LQRLSRKIPKSIIPSLTSLLQK---TQYHTNFSLQNPLFQPINDQILHKEVIFTSLHKRG 986
            +QR+S ++ + I  S+ SLL +   TQ    FS++ P F+ +      ++ I     K G
Sbjct: 1    MQRVSGRVSRIITSSVASLLVRASSTQSFGTFSVK-PNFRKL------QQGIPGDFPKWG 53

Query: 985  TLGFCRYSKFATGYEPLQKKALDSIIDIERAKHLSDKELVSVWDDYHLGRGHIGASMKAK 806
            +LGFCR   FA+G+ PLQ K L SI+DIER K  S +++ S+WDDYHLGRGHI ASMK K
Sbjct: 54   SLGFCRTLGFASGFTPLQPKPLGSILDIERVKDRSSEDIASIWDDYHLGRGHIAASMKPK 113

Query: 805  LYRLLEQRAISCRHFVIPLWRGSGYTTFFVQVQMPCVLFTGLEDYKAKGTQAAPYFTATY 626
            LY LLE RA +CRHFVIPLWRGSGY T F QVQM  ++FTGLEDYKA+GTQAAPYFT T+
Sbjct: 114  LYHLLEHRAANCRHFVIPLWRGSGYATMFAQVQMQHMIFTGLEDYKARGTQAAPYFTVTF 173

Query: 625  YTEFEENKDVVLIRGDVVFTSKLTDTEAQWLLETAQSFYLNDVRYKLVERFNKETREFEF 446
            YT+F E+KD+VLIRGD+VFTSKL+D+EA+WLLETAQSFYLNDVRYKLVERFNKETREFEF
Sbjct: 174  YTDFAESKDLVLIRGDIVFTSKLSDSEAKWLLETAQSFYLNDVRYKLVERFNKETREFEF 233

Query: 445  RDVLQALEMPM 413
            +DVLQAL+MP+
Sbjct: 234  KDVLQALDMPV 244


>ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
            [Glycine max]
          Length = 251

 Score =  313 bits (802), Expect = 6e-83
 Identities = 147/205 (71%), Positives = 174/205 (84%)
 Frame = -2

Query: 1027 LHKEVIFTSLHKRGTLGFCRYSKFATGYEPLQKKALDSIIDIERAKHLSDKELVSVWDDY 848
            LH+  I +   K G++GFCR SKFA+G+ PLQ K LDSI+D+ R K    +++ SVWDDY
Sbjct: 46   LHQPEIPSDFQKWGSVGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDDY 105

Query: 847  HLGRGHIGASMKAKLYRLLEQRAISCRHFVIPLWRGSGYTTFFVQVQMPCVLFTGLEDYK 668
            H+GRGHIGA+MKAKLY LLE RA  CR+FVIPLWRGSGYTT FVQVQ P ++FTGLEDYK
Sbjct: 106  HIGRGHIGATMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGLEDYK 165

Query: 667  AKGTQAAPYFTATYYTEFEENKDVVLIRGDVVFTSKLTDTEAQWLLETAQSFYLNDVRYK 488
            A+GTQAAPYFT T+YTEF E+KD+VLIRGDVVFTSKLTD EA+WLLETAQSFYLND RYK
Sbjct: 166  ARGTQAAPYFTLTFYTEFAESKDLVLIRGDVVFTSKLTDPEAKWLLETAQSFYLNDARYK 225

Query: 487  LVERFNKETREFEFRDVLQALEMPM 413
            LVERFN++T +FEF+DVLQ L+MP+
Sbjct: 226  LVERFNRQTHDFEFKDVLQVLDMPI 250


>ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|222848728|gb|EEE86275.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  307 bits (787), Expect = 3e-81
 Identities = 154/248 (62%), Positives = 195/248 (78%)
 Frame = -2

Query: 1156 LQRLSRKIPKSIIPSLTSLLQKTQYHTNFSLQNPLFQPINDQILHKEVIFTSLHKRGTLG 977
            +QR+S ++ ++   SL++LL +T      S      +  N Q   +  I     K G+LG
Sbjct: 1    MQRISSRLTRT--SSLSTLLTQT---IKRSSNTHSLKSANLQKQQEPAIPGHFLKWGSLG 55

Query: 976  FCRYSKFATGYEPLQKKALDSIIDIERAKHLSDKELVSVWDDYHLGRGHIGASMKAKLYR 797
            F R S+FATG+ PL+ K LDSI+DIERAK  S ++L S+WDDYHLGRGHIGASMKAKLY+
Sbjct: 56   FVRTSRFATGFTPLEPKPLDSIMDIERAKTKSPEDLASIWDDYHLGRGHIGASMKAKLYQ 115

Query: 796  LLEQRAISCRHFVIPLWRGSGYTTFFVQVQMPCVLFTGLEDYKAKGTQAAPYFTATYYTE 617
            LL QRA  C++FVIPLWRGSGYTT F QVQMP ++FTGLEDYK++GTQA+PY T  +YTE
Sbjct: 116  LLVQRAADCKYFVIPLWRGSGYTTMFAQVQMPHMIFTGLEDYKSRGTQASPYLTVKFYTE 175

Query: 616  FEENKDVVLIRGDVVFTSKLTDTEAQWLLETAQSFYLNDVRYKLVERFNKETREFEFRDV 437
            F E+KD+VLIRGD+VFTSKLTD EA+W+LETAQSFYLNDVR+KLVE+FNK+TR+FEF+DV
Sbjct: 176  FAESKDLVLIRGDIVFTSKLTDEEAEWILETAQSFYLNDVRFKLVEQFNKQTRDFEFKDV 235

Query: 436  LQALEMPM 413
            L++L MP+
Sbjct: 236  LRSLNMPI 243


>ref|XP_002453669.1| hypothetical protein SORBIDRAFT_04g010120 [Sorghum bicolor]
           gi|241933500|gb|EES06645.1| hypothetical protein
           SORBIDRAFT_04g010120 [Sorghum bicolor]
          Length = 246

 Score =  301 bits (771), Expect = 2e-79
 Identities = 143/184 (77%), Positives = 164/184 (89%)
 Frame = -2

Query: 967 YSKFATGYEPLQKKALDSIIDIERAKHLSDKELVSVWDDYHLGRGHIGASMKAKLYRLLE 788
           YS+FA+G+ PL+ K L SI+DIERAK LS + LV+ WDDYHLGRGHIGASMKAKLY LLE
Sbjct: 61  YSQFASGFTPLKPKPLGSILDIERAKGLSPEHLVAAWDDYHLGRGHIGASMKAKLYHLLE 120

Query: 787 QRAISCRHFVIPLWRGSGYTTFFVQVQMPCVLFTGLEDYKAKGTQAAPYFTATYYTEFEE 608
           QR+ SCRHFVIPLW+GSGYTT F+QVQMP ++FTGLEDYKA+GTQA+PY+T T+YTEF E
Sbjct: 121 QRSDSCRHFVIPLWKGSGYTTMFMQVQMPYIIFTGLEDYKARGTQASPYYTVTHYTEFSE 180

Query: 607 NKDVVLIRGDVVFTSKLTDTEAQWLLETAQSFYLNDVRYKLVERFNKETREFEFRDVLQA 428
            KD VLIRGDVVFTSKLTD+EA+ LLETA SFYLNDVRY+LVERFNKET +FEFRDVLQ 
Sbjct: 181 TKDTVLIRGDVVFTSKLTDSEAKTLLETAHSFYLNDVRYRLVERFNKETHDFEFRDVLQV 240

Query: 427 LEMP 416
           L+MP
Sbjct: 241 LDMP 244


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