BLASTX nr result

ID: Coptis21_contig00011292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011292
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267...   120   2e-25
ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802...   108   3e-22
ref|XP_003622400.1| RING finger and CHY zinc finger domain-conta...   104   9e-21
ref|XP_004138295.1| PREDICTED: uncharacterized protein LOC101212...   102   3e-20
ref|XP_002511501.1| zinc finger protein, putative [Ricinus commu...    96   3e-18

>ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267228 [Vitis vinifera]
          Length = 1288

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/91 (59%), Positives = 73/91 (80%)
 Frame = +2

Query: 5    KIIGSLLGNTRAEVLQQMIPWLMASLSPTERSAMMSLWRKATQNTMFDEWLAEWWEGMST 184
            KIIGS+LG  RAE+LQ++IPWLMASL+P E+ AMMSLWRKAT+NTMF+EWL EWW+G++ 
Sbjct: 797  KIIGSILGRMRAEILQEIIPWLMASLTPKEQHAMMSLWRKATKNTMFEEWLGEWWDGVNQ 856

Query: 185  HNISIVAEEPDILPLQRVDPLEIIATYLDKK 277
            ++I+ V EE  +      DPLE+++ YL K+
Sbjct: 857  YDIAKVVEESKMPQPWLADPLEVVSRYLYKE 887


>ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802706 [Glycine max]
          Length = 1262

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/96 (53%), Positives = 70/96 (72%)
 Frame = +2

Query: 5    KIIGSLLGNTRAEVLQQMIPWLMASLSPTERSAMMSLWRKATQNTMFDEWLAEWWEGMST 184
            +IIG +LG  RAE+LQ MIPWLMASL+  E+  +M LW  AT+NTMFDEWL EWW+G   
Sbjct: 772  RIIGCMLGRIRAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWDG--- 828

Query: 185  HNISIVAEEPDILPLQRVDPLEIIATYLDKKHYHDL 292
            ++++ V E  ++ PLQ V+PLEII+ YL ++   +L
Sbjct: 829  YSLTKVTEGSNVAPLQPVEPLEIISKYLSEEILDEL 864


>ref|XP_003622400.1| RING finger and CHY zinc finger domain-containing protein [Medicago
            truncatula] gi|355497415|gb|AES78618.1| RING finger and
            CHY zinc finger domain-containing protein [Medicago
            truncatula]
          Length = 1225

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/91 (53%), Positives = 65/91 (71%)
 Frame = +2

Query: 5    KIIGSLLGNTRAEVLQQMIPWLMASLSPTERSAMMSLWRKATQNTMFDEWLAEWWEGMST 184
            KIIG +LG   AE+LQ MIPWLMASL+  E+  +M LW  AT+NTMFDEWL EWW G   
Sbjct: 781  KIIGCILGRISAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWNG--- 837

Query: 185  HNISIVAEEPDILPLQRVDPLEIIATYLDKK 277
            ++++  A+  +  PLQ V+PLEII+ YL ++
Sbjct: 838  YSVAKAADGSNDAPLQNVEPLEIISKYLSEE 868


>ref|XP_004138295.1| PREDICTED: uncharacterized protein LOC101212459 [Cucumis sativus]
            gi|449477600|ref|XP_004155068.1| PREDICTED:
            uncharacterized protein LOC101229801 [Cucumis sativus]
          Length = 1252

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = +2

Query: 8    IIGSLLGNTRAEVLQQMIPWLMASLSPTERSAMMSLWRKATQNTMFDEWLAEWWEGMSTH 187
            +IG++ G T+AE+LQ MIPW M+ L+P+++  MMS++ K T+NTMF+EWL EWWEG    
Sbjct: 763  LIGAIFGRTKAEILQDMIPWQMSYLTPSDQHDMMSMFHKVTRNTMFNEWLREWWEGYDHE 822

Query: 188  NISIVAEEPDILPLQRVDPLEIIATYLDKK 277
            N++  AE   I PL   DPLEII+ YL K+
Sbjct: 823  NVA--AEVKTITPLLTSDPLEIISKYLSKE 850


>ref|XP_002511501.1| zinc finger protein, putative [Ricinus communis]
            gi|223550616|gb|EEF52103.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 1268

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = +2

Query: 5    KIIGSLLGNTRAEVLQQMIPWLMASLSPTERSAMMSLWRKATQNTMFDEWLAEWWEGMST 184
            KIIG ++G   A+ LQ MIPWL  SL+P E+  +MSLWRK T+NT FDEWL EW EG   
Sbjct: 784  KIIGLMIGKVGAKFLQDMIPWLTGSLTPEEQHVLMSLWRKVTKNTKFDEWLGEWLEG--- 840

Query: 185  HNISIVAEEPDILPLQRVDPLEIIATYLDK 274
            ++I+ V+EE +   ++  DPLEII++YL K
Sbjct: 841  YDIAHVSEESN--TVRAADPLEIISSYLPK 868


Top