BLASTX nr result
ID: Coptis21_contig00011284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011284
(2108 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing sub... 823 0.0
gb|ABK96572.1| unknown [Populus trichocarpa x Populus deltoides] 820 0.0
gb|AAP83637.1| katanin [Gossypium hirsutum] 818 0.0
ref|XP_003528370.1| PREDICTED: katanin p60 ATPase-containing sub... 815 0.0
gb|AAP43505.2| katanin-like protein [Gossypium hirsutum] 811 0.0
>ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 2
[Glycine max]
Length = 525
Score = 823 bits (2126), Expect = 0.0
Identities = 420/533 (78%), Positives = 454/533 (85%), Gaps = 3/533 (0%)
Frame = -3
Query: 1845 GTLSGVQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALT 1666
G+L+G+Q+HLKLARDYA EGLYDTSIIFFDGA+AQINKHLST++DPLIR+KWMN KKAL+
Sbjct: 4 GSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKKALS 63
Query: 1665 EEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGS--FVFQPLDEYPTSSNAP-PID 1495
EE E+VKQLD ERRA K+ N RRP+SPPI+ K S FVFQPLDEYPTSS+ P P+D
Sbjct: 64 EETEVVKQLDAERRAFKD---NPIGRRPSSPPISVKSSSSFVFQPLDEYPTSSSGPGPVD 120
Query: 1494 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWARGAASKAVSTTTTGRGAKXXXXXXX 1315
DPDVW PP+RD SRRP R Q+ RKS D WARGA ++ T GRGAK
Sbjct: 121 DPDVWRPPSRDTTSRRPARPGQVGARKSAQDGAWARGATAR---TGAAGRGAKAGATGRV 177
Query: 1314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVL 1135
GDAE+GK+K+LQYEGPDPELAAMLERDVL
Sbjct: 178 NSGTRASTTTGKKGGAASSGKANSLN-----GDAEDGKSKKLQYEGPDPELAAMLERDVL 232
Query: 1134 ETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 955
ETSPG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK
Sbjct: 233 ETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 292
Query: 954 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 775
AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS
Sbjct: 293 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 352
Query: 774 GEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYI 595
GEHESSRRVKSELLVQVDGV+NS+T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYI
Sbjct: 353 GEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYI 412
Query: 594 PLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 415
PLPNFESRKELIRINLKTVEVA DVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG
Sbjct: 413 PLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 472
Query: 414 KTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 256
KTRDEIK+MSK+D++KDP+A CDFEEA+ KVQRSVS ADIERHEKWF+EFGSA
Sbjct: 473 KTRDEIKNMSKDDISKDPVAKCDFEEALRKVQRSVSQADIERHEKWFTEFGSA 525
>gb|ABK96572.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 525
Score = 820 bits (2117), Expect = 0.0
Identities = 419/528 (79%), Positives = 453/528 (85%)
Frame = -3
Query: 1839 LSGVQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALTEE 1660
LSG+QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMN KK+L+EE
Sbjct: 13 LSGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLTTLDDPLIRTKWMNLKKSLSEE 72
Query: 1659 IEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPIDDPDVW 1480
EIVKQLD ERRA KE+ RR SPPI K SFVFQPLDEYPTSS A PIDDPDVW
Sbjct: 73 TEIVKQLDAERRAFKEAPAA---RRVASPPIHAKSSFVFQPLDEYPTSS-AAPIDDPDVW 128
Query: 1479 APPNRDIGSRRPTRTNQMSIRKSPSDATWARGAASKAVSTTTTGRGAKXXXXXXXXXXXX 1300
PP+RD SRRPTR +Q+ +RKSP D WARGA+++ T TTGRGAK
Sbjct: 129 RPPSRDTTSRRPTRASQVGLRKSPQDGAWARGASTR---TGTTGRGAKTAASSRVNSGVR 185
Query: 1299 XXXXXXXXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVLETSPG 1120
GDAE+GK +R QYEGPDP+LA MLERDVLET+PG
Sbjct: 186 ASTTGKKGTGKSGRGDTAN-------GDAEDGK-RRPQYEGPDPDLAEMLERDVLETTPG 237
Query: 1119 IRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATE 940
+RWDDVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATE
Sbjct: 238 VRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATE 297
Query: 939 CGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHES 760
CGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHES
Sbjct: 298 CGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHES 357
Query: 759 SRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNF 580
SRRVKSELLVQVDGVNNSSTG+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNF
Sbjct: 358 SRRVKSELLVQVDGVNNSSTGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNF 417
Query: 579 ESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDE 400
ESRKELIRINLKTVEV+ DVNIDEVARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDE
Sbjct: 418 ESRKELIRINLKTVEVSTDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDE 477
Query: 399 IKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 256
IK+M K++++ DP+AMCDFEEA+ KVQRSVSP+DIE+HEKWFSEFGSA
Sbjct: 478 IKNMPKDEISNDPVAMCDFEEALRKVQRSVSPSDIEKHEKWFSEFGSA 525
>gb|AAP83637.1| katanin [Gossypium hirsutum]
Length = 520
Score = 818 bits (2114), Expect = 0.0
Identities = 419/533 (78%), Positives = 453/533 (84%), Gaps = 1/533 (0%)
Frame = -3
Query: 1851 MVG-TLSGVQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKK 1675
MVG +L+G+QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIRSKWMN KK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 1674 ALTEEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPID 1495
AL+EE E+VKQLD ERR+ KE+ N RRP+SPPI K SFVFQPLDEYPTSS AP +D
Sbjct: 61 ALSEEAEVVKQLDAERRSFKEA---PNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAP-MD 116
Query: 1494 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWARGAASKAVSTTTTGRGAKXXXXXXX 1315
DPDVW PP+RD +RRP R Q +RKSP D RG+ T TGRGAK
Sbjct: 117 DPDVWRPPSRDTSTRRPARGGQAGMRKSPQDGISGRGSTR----TAATGRGAKAGASSRT 172
Query: 1314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVL 1135
GDAE+GK+KR QYEGPDP+LA MLERDVL
Sbjct: 173 NTGVRGSTTGKKGTGSGKPSKGDSAN-----GDAEDGKSKRSQYEGPDPDLAEMLERDVL 227
Query: 1134 ETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 955
ET+PG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK
Sbjct: 228 ETTPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 287
Query: 954 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 775
AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGAS
Sbjct: 288 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGAS 347
Query: 774 GEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYI 595
GEHESSRRVKSELLVQVDGVNN+ T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYI
Sbjct: 348 GEHESSRRVKSELLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYI 407
Query: 594 PLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 415
PLPNFESRKELIRINLKTVEVAADV+IDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG
Sbjct: 408 PLPNFESRKELIRINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 467
Query: 414 KTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 256
KTRDEIK+MSK++++KDP+AMCDFEEA++KVQRSVS ADIE+HEKWFSEFGSA
Sbjct: 468 KTRDEIKNMSKDEISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520
>ref|XP_003528370.1| PREDICTED: katanin p60 ATPase-containing subunit-like [Glycine max]
Length = 529
Score = 815 bits (2104), Expect = 0.0
Identities = 416/533 (78%), Positives = 452/533 (84%), Gaps = 3/533 (0%)
Frame = -3
Query: 1845 GTLSGVQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALT 1666
G+L+G+Q+HLKLARDYA EGLYDTSIIFFDGA+AQINKHLST+ DPLIR+KWMN KK+L+
Sbjct: 4 GSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVQDPLIRAKWMNVKKSLS 63
Query: 1665 EEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGS--FVFQPLDEYPTSSNAP-PID 1495
EE E+VKQLD ERRA K+ N RRP SPPI+ K S FVFQPLDEYPTSS+ P+D
Sbjct: 64 EETEVVKQLDAERRAFKD---NPIGRRPASPPISVKSSSSFVFQPLDEYPTSSSGSGPVD 120
Query: 1494 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWARGAASKAVSTTTTGRGAKXXXXXXX 1315
DPDVW PP+RD SRRP R Q+ RKS D WARGA +++ + GRGAK
Sbjct: 121 DPDVWRPPSRDTTSRRPARPGQVGARKSAQDGAWARGATTRSGAA---GRGAKAGATGRV 177
Query: 1314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVL 1135
GDAE+GK+K+ QYEGPDPELAAMLERDVL
Sbjct: 178 NSGTRASTTGKKGGAASGKASKTDAAAAAN-GDAEDGKSKKPQYEGPDPELAAMLERDVL 236
Query: 1134 ETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 955
ETSPG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK
Sbjct: 237 ETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 296
Query: 954 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 775
AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS
Sbjct: 297 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 356
Query: 774 GEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYI 595
GEHESSRRVKSELLVQVDGV+NS+T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYI
Sbjct: 357 GEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYI 416
Query: 594 PLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 415
PLPNFESRKELIRINLKTVEVA DVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG
Sbjct: 417 PLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 476
Query: 414 KTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 256
KTRDEIK+MSK++++KDP+AMCDFEEA+ KVQRSVS ADIERHEKWF+EFGSA
Sbjct: 477 KTRDEIKNMSKDEISKDPVAMCDFEEALGKVQRSVSQADIERHEKWFTEFGSA 529
>gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]
Length = 520
Score = 811 bits (2094), Expect = 0.0
Identities = 416/533 (78%), Positives = 450/533 (84%), Gaps = 1/533 (0%)
Frame = -3
Query: 1851 MVG-TLSGVQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKK 1675
MVG +L+G+QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIRSKWMN KK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 1674 ALTEEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPID 1495
AL+EE E+VKQLD ERR+ KE+ N RRP+SPPI K SFVFQPLDEYPTSS AP +D
Sbjct: 61 ALSEETEVVKQLDAERRSFKEA---PNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAP-MD 116
Query: 1494 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWARGAASKAVSTTTTGRGAKXXXXXXX 1315
DPDVW PP+RD +RRP R Q +RKSP D RG T TGRGAK
Sbjct: 117 DPDVWRPPSRDTSTRRPARGGQAGMRKSPQDGISGRGNTR----TAATGRGAKAGASSRT 172
Query: 1314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVL 1135
GDAE+GK KR QYEGPDP+LA MLERDVL
Sbjct: 173 NTGVRGSTTGKKGTGSGKSSKGDSAN-----GDAEDGKLKRSQYEGPDPDLAEMLERDVL 227
Query: 1134 ETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 955
ET+PG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMF PPGTGKTLLAK
Sbjct: 228 ETTPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFDPPGTGKTLLAK 287
Query: 954 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 775
AVATECGTTFFNVSSATLASKWRGES+RMVRCLFDLARAYAPSTIFIDEIDSLCN+RGAS
Sbjct: 288 AVATECGTTFFNVSSATLASKWRGESKRMVRCLFDLARAYAPSTIFIDEIDSLCNARGAS 347
Query: 774 GEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYI 595
GEHESSRRVKSELLVQVDGVNN+ T +DG+RKIV+VLAATNFPWDIDEALRRRLEKRIYI
Sbjct: 348 GEHESSRRVKSELLVQVDGVNNTGTNEDGSRKIVVVLAATNFPWDIDEALRRRLEKRIYI 407
Query: 594 PLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 415
PLPNFESRKELIRINLKTVEVAADV+IDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG
Sbjct: 408 PLPNFESRKELIRINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 467
Query: 414 KTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 256
KTRDEIK+MSK++++KDP+AMCDFEEA++KVQRSVS ADIE+HEKWFSEFGSA
Sbjct: 468 KTRDEIKNMSKDEISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520