BLASTX nr result

ID: Coptis21_contig00011277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011277
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20352.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253...   118   4e-25
ref|XP_002517962.1| Peroxisomal membrane protein, putative [Rici...   115   5e-24
gb|ABK96261.1| unknown [Populus trichocarpa x Populus deltoides]      113   2e-23
ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>emb|CBI20352.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/65 (86%), Positives = 57/65 (87%)
 Frame = -3

Query: 440 WKLWPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP* 261
           WKLWPFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEAS E  S SP 
Sbjct: 197 WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAASNSPP 256

Query: 260 VSSPE 246
             SPE
Sbjct: 257 TGSPE 261


>ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253839 [Vitis vinifera]
          Length = 371

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/65 (86%), Positives = 57/65 (87%)
 Frame = -3

Query: 440 WKLWPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP* 261
           WKLWPFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEAS E  S SP 
Sbjct: 306 WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAASNSPP 365

Query: 260 VSSPE 246
             SPE
Sbjct: 366 TGSPE 370


>ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis]
           gi|223542944|gb|EEF44480.1| Peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 344

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = -3

Query: 440 WKLWPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKS 267
           WKLWPF+HLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEARTSEA+IE  SKS
Sbjct: 277 WKLWPFSHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARTSEATIEATSKS 334


>gb|ABK96261.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 369

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/65 (84%), Positives = 58/65 (89%)
 Frame = -3

Query: 440 WKLWPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP* 261
           WKLWPFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEA++E  S S  
Sbjct: 305 WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVEASSSSL- 363

Query: 260 VSSPE 246
            SSPE
Sbjct: 364 PSSPE 368


>ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|222869822|gb|EEF06953.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = -3

Query: 440 WKLWPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKS 267
           WKLWPFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEA++E  S S
Sbjct: 181 WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVEASSSS 238


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