BLASTX nr result

ID: Coptis21_contig00011274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011274
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527024.1| PREDICTED: probable 26S proteasome complex s...    63   3e-08
ref|XP_003523073.1| PREDICTED: probable 26S proteasome complex s...    63   3e-08
gb|ACU14959.1| unknown [Glycine max]                                   63   3e-08
ref|XP_003550135.1| PREDICTED: probable 26S proteasome complex s...    62   6e-08
ref|XP_003544644.1| PREDICTED: probable 26S proteasome complex s...    62   6e-08

>ref|XP_003527024.1| PREDICTED: probable 26S proteasome complex subunit sem1-1 [Glycine
           max]
          Length = 73

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/57 (54%), Positives = 34/57 (59%)
 Frame = +2

Query: 155 IDLXXXXXXXXXXQLNEEWDDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRKELEKKT 325
           IDL          ++NEEWDDKEEGKEVTQQWE           FSLQLR+ELE  T
Sbjct: 14  IDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNT 70


>ref|XP_003523073.1| PREDICTED: probable 26S proteasome complex subunit sem1-1 [Glycine
           max] gi|255629245|gb|ACU14967.1| unknown [Glycine max]
          Length = 73

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/57 (54%), Positives = 34/57 (59%)
 Frame = +2

Query: 155 IDLXXXXXXXXXXQLNEEWDDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRKELEKKT 325
           IDL          ++NEEWDDKEEGKEVTQQWE           FSLQLR+ELE  T
Sbjct: 14  IDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNT 70


>gb|ACU14959.1| unknown [Glycine max]
          Length = 73

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/57 (54%), Positives = 34/57 (59%)
 Frame = +2

Query: 155 IDLXXXXXXXXXXQLNEEWDDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRKELEKKT 325
           IDL          ++NEEWDDKEEGKEVTQQWE           FSLQLR+ELE  T
Sbjct: 14  IDLFEGDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNT 70


>ref|XP_003550135.1| PREDICTED: probable 26S proteasome complex subunit sem1-1-like
           [Glycine max]
          Length = 71

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/57 (52%), Positives = 34/57 (59%)
 Frame = +2

Query: 155 IDLXXXXXXXXXXQLNEEWDDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRKELEKKT 325
           IDL          ++NEEWDDKEEGKEVTQQWE           FSLQL++ELE  T
Sbjct: 14  IDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLKRELESNT 70


>ref|XP_003544644.1| PREDICTED: probable 26S proteasome complex subunit sem1-1 isoform 1
           [Glycine max] gi|356552583|ref|XP_003544645.1|
           PREDICTED: probable 26S proteasome complex subunit
           sem1-1 isoform 2 [Glycine max]
           gi|255625687|gb|ACU13188.1| unknown [Glycine max]
          Length = 73

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/57 (52%), Positives = 34/57 (59%)
 Frame = +2

Query: 155 IDLXXXXXXXXXXQLNEEWDDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRKELEKKT 325
           IDL          ++NEEWDDKEEGKEVTQQWE           FSLQL++ELE  T
Sbjct: 14  IDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLKRELESNT 70


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