BLASTX nr result
ID: Coptis21_contig00011258
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011258 (807 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523449.1| spliceosome associated protein, putative [Ri... 88 3e-15 ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|2... 86 7e-15 gb|ABK25115.1| unknown [Picea sitchensis] gi|224284110|gb|ACN397... 86 1e-14 ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803... 85 2e-14 ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glyci... 85 2e-14 >ref|XP_002523449.1| spliceosome associated protein, putative [Ricinus communis] gi|223537277|gb|EEF38908.1| spliceosome associated protein, putative [Ricinus communis] Length = 201 Score = 87.8 bits (216), Expect = 3e-15 Identities = 40/79 (50%), Positives = 59/79 (74%) Frame = -1 Query: 576 GNIDDRVPEKVLYEILIQAGPILDFSFPVNQQTKKSKGYAFVAYKSSEVADYAVRLFYNT 397 GN+D+RV E+VLY+ILIQAG +++ P +++T KSKGYAF Y+S ++ADYAV+LF Sbjct: 13 GNLDERVSERVLYDILIQAGRVVELYIPRDKETDKSKGYAFAEYESEQIADYAVKLFSGL 72 Query: 396 VVLYGKRLKFELNKNAMAL 340 V+L+ + LKF ++ AL Sbjct: 73 VILHNRTLKFAISGQDKAL 91 >ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|222870991|gb|EEF08122.1| predicted protein [Populus trichocarpa] Length = 195 Score = 86.3 bits (212), Expect = 7e-15 Identities = 38/73 (52%), Positives = 55/73 (75%) Frame = -1 Query: 576 GNIDDRVPEKVLYEILIQAGPILDFSFPVNQQTKKSKGYAFVAYKSSEVADYAVRLFYNT 397 GN+D+RV ++VLY+ILIQAG ++D P +++T K KGYAF Y++ E+ADYAV+LF Sbjct: 12 GNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEIADYAVKLFSGL 71 Query: 396 VVLYGKRLKFELN 358 V LY + LKF ++ Sbjct: 72 VTLYNRTLKFAIS 84 >gb|ABK25115.1| unknown [Picea sitchensis] gi|224284110|gb|ACN39792.1| unknown [Picea sitchensis] gi|224285790|gb|ACN40610.1| unknown [Picea sitchensis] gi|294464481|gb|ADE77751.1| unknown [Picea sitchensis] Length = 206 Score = 85.5 bits (210), Expect = 1e-14 Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 6/89 (6%) Frame = -1 Query: 576 GNIDDRVPEKVLYEILIQAGPILDFSFPVNQQTKKSKGYAFVAYKSSEVADYAVRLFYNT 397 GN+DDRV E+VLYE++IQAGP++D P +++T + KGYAF Y++ EVA YA++LF Sbjct: 12 GNLDDRVDERVLYEVMIQAGPLVDLYIPRDKETNRHKGYAFAEYETEEVAQYAIKLFSGL 71 Query: 396 VVLYGKRLKFELN------KNAMALSESP 328 V L+ K ++F ++ + +A+S SP Sbjct: 72 VCLHNKFVRFAISGQDKSPQTQIAVSASP 100 >ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max] Length = 196 Score = 85.1 bits (209), Expect = 2e-14 Identities = 36/73 (49%), Positives = 56/73 (76%) Frame = -1 Query: 576 GNIDDRVPEKVLYEILIQAGPILDFSFPVNQQTKKSKGYAFVAYKSSEVADYAVRLFYNT 397 GN+D+RV ++VLY+ILIQAG ++D P +++++K KG+AF Y++ E+ADYAVRLF Sbjct: 12 GNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGL 71 Query: 396 VVLYGKRLKFELN 358 + LY + LKF ++ Sbjct: 72 ITLYNRTLKFAIS 84 >ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max] Length = 186 Score = 85.1 bits (209), Expect = 2e-14 Identities = 36/73 (49%), Positives = 56/73 (76%) Frame = -1 Query: 576 GNIDDRVPEKVLYEILIQAGPILDFSFPVNQQTKKSKGYAFVAYKSSEVADYAVRLFYNT 397 GN+D+RV ++VLY+ILIQAG ++D P +++++K KG+AF Y++ E+ADYAVRLF Sbjct: 12 GNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGL 71 Query: 396 VVLYGKRLKFELN 358 + LY + LKF ++ Sbjct: 72 ITLYNRTLKFAIS 84