BLASTX nr result

ID: Coptis21_contig00011247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011247
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616895.1| hypothetical protein MTR_5g085420 [Medicago ...   183   3e-44
ref|XP_004144544.1| PREDICTED: UPF0451 protein C17orf61 homolog ...   181   1e-43
ref|NP_001237354.1| uncharacterized protein LOC100527017 [Glycin...   180   2e-43
ref|XP_002320512.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43
gb|ABK22296.1| unknown [Picea sitchensis] gi|116783158|gb|ABK228...   180   2e-43

>ref|XP_003616895.1| hypothetical protein MTR_5g085420 [Medicago truncatula]
           gi|355518230|gb|AES99853.1| hypothetical protein
           MTR_5g085420 [Medicago truncatula]
           gi|388518471|gb|AFK47297.1| unknown [Medicago
           truncatula]
          Length = 111

 Score =  183 bits (464), Expect = 3e-44
 Identities = 88/111 (79%), Positives = 91/111 (81%)
 Frame = -3

Query: 562 MNPLTWHKXXXXXXXXXXXXGTYGAHMFKPKNPTYKEVWHTASLYHLVHTAALVAAPITK 383
           MNPL WHK            GTYGAH FKP+NPTYK+VWHTASLYHLVHTAALV+APITK
Sbjct: 1   MNPLIWHKVAAISGVAALGLGTYGAHAFKPQNPTYKDVWHTASLYHLVHTAALVSAPITK 60

Query: 382 YPNVFGGLLTGGILAFSGTCYTVALLEDRKYSGLAPFGGFAFIAAWASLLF 230
            PNVFGGLLT GILAFSGTCYTVA LEDRKYS LAPFGGFAFIAAW SL F
Sbjct: 61  NPNVFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIAAWGSLFF 111


>ref|XP_004144544.1| PREDICTED: UPF0451 protein C17orf61 homolog [Cucumis sativus]
           gi|449517667|ref|XP_004165866.1| PREDICTED: UPF0451
           protein C17orf61 homolog [Cucumis sativus]
          Length = 111

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/111 (79%), Positives = 90/111 (81%)
 Frame = -3

Query: 562 MNPLTWHKXXXXXXXXXXXXGTYGAHMFKPKNPTYKEVWHTASLYHLVHTAALVAAPITK 383
           MNPL WHK            GTYGAH FKPKNP YKEVW TASLYHLVHTAAL+AAP TK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 382 YPNVFGGLLTGGILAFSGTCYTVALLEDRKYSGLAPFGGFAFIAAWASLLF 230
            PN+FGGLLT GILAFSGTCYTVALLEDRKYS LAPFGGFAFI AWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111


>ref|NP_001237354.1| uncharacterized protein LOC100527017 [Glycine max]
           gi|255631372|gb|ACU16053.1| unknown [Glycine max]
          Length = 111

 Score =  180 bits (456), Expect = 2e-43
 Identities = 85/111 (76%), Positives = 91/111 (81%)
 Frame = -3

Query: 562 MNPLTWHKXXXXXXXXXXXXGTYGAHMFKPKNPTYKEVWHTASLYHLVHTAALVAAPITK 383
           M+P  WHK            GTYGAH+FKP+NP YK+VWHTASLYHLVHTAALVAAPITK
Sbjct: 1   MDPQVWHKVAAISGVAALGLGTYGAHVFKPQNPAYKDVWHTASLYHLVHTAALVAAPITK 60

Query: 382 YPNVFGGLLTGGILAFSGTCYTVALLEDRKYSGLAPFGGFAFIAAWASLLF 230
           +PNVFGGLLT GILAFSGTCYTVA LEDRKYS +APFGGFAFIAAW SL F
Sbjct: 61  HPNVFGGLLTAGILAFSGTCYTVAFLEDRKYSTMAPFGGFAFIAAWGSLFF 111


>ref|XP_002320512.1| predicted protein [Populus trichocarpa] gi|222861285|gb|EEE98827.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score =  180 bits (456), Expect = 2e-43
 Identities = 86/111 (77%), Positives = 93/111 (83%)
 Frame = -3

Query: 562 MNPLTWHKXXXXXXXXXXXXGTYGAHMFKPKNPTYKEVWHTASLYHLVHTAALVAAPITK 383
           M+P  WH+            GTYGAH+FKP+NPTYKEVW TASLYHLVHTAAL+AAPITK
Sbjct: 1   MDPSMWHRIAAVSGVAALGLGTYGAHVFKPENPTYKEVWQTASLYHLVHTAALLAAPITK 60

Query: 382 YPNVFGGLLTGGILAFSGTCYTVALLEDRKYSGLAPFGGFAFIAAWASLLF 230
           +PN+FGGLLT GILAFSGTCYTVALLEDRKYS LAPFGGFAFI AWASLLF
Sbjct: 61  HPNIFGGLLTTGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111


>gb|ABK22296.1| unknown [Picea sitchensis] gi|116783158|gb|ABK22815.1| unknown
           [Picea sitchensis]
          Length = 123

 Score =  180 bits (456), Expect = 2e-43
 Identities = 84/120 (70%), Positives = 94/120 (78%)
 Frame = -3

Query: 589 KSERNNNKRMNPLTWHKXXXXXXXXXXXXGTYGAHMFKPKNPTYKEVWHTASLYHLVHTA 410
           KS     + M+PL WHK            GTYGAHMFKP NP YKEVWHTASLYHL+HTA
Sbjct: 4   KSMLRGVREMDPLVWHKVAGISGIAALGLGTYGAHMFKPANPAYKEVWHTASLYHLIHTA 63

Query: 409 ALVAAPITKYPNVFGGLLTGGILAFSGTCYTVALLEDRKYSGLAPFGGFAFIAAWASLLF 230
           A++AAP TK+P++FG LLT GI+AFSGTCYTVALLEDRKYS +APFGGFAFI AWASLLF
Sbjct: 64  AMLAAPATKHPHIFGALLTSGIIAFSGTCYTVALLEDRKYSSMAPFGGFAFIGAWASLLF 123


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