BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011246
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056779.1| Os06g0143900 [Oryza sativa Japonica Group] g...   224   5e-56
gb|EEE65072.1| hypothetical protein OsJ_20099 [Oryza sativa Japo...   224   5e-56
gb|EAY99623.1| hypothetical protein OsI_21602 [Oryza sativa Indi...   224   5e-56
ref|XP_003571107.1| PREDICTED: coatomer subunit beta'-2-like [Br...   222   2e-55
ref|XP_002453525.1| hypothetical protein SORBIDRAFT_04g007330 [S...   220   7e-55

>ref|NP_001056779.1| Os06g0143900 [Oryza sativa Japonica Group]
            gi|75109943|sp|Q5VQ78.1|COB21_ORYSJ RecName:
            Full=Coatomer subunit beta'-1; AltName: Full=Beta'-coat
            protein 1; Short=Beta'-COP 1 gi|55296352|dbj|BAD68397.1|
            putative coatomer protein complex, beta prime subunit
            [Oryza sativa Japonica Group]
            gi|113594819|dbj|BAF18693.1| Os06g0143900 [Oryza sativa
            Japonica Group]
          Length = 907

 Score =  224 bits (570), Expect = 5e-56
 Identities = 121/283 (42%), Positives = 171/283 (60%), Gaps = 4/283 (1%)
 Frame = -3

Query: 1244 RIEIFDDHFQRKKAMQPTFLVEQIFGGAMLCVSSSTLACFYDWEDHELIQKIDLSVENVF 1065
            RI+IF   FQ KK ++PTF  E+IFGG +L + SS   CFYDW D  LI++ID++V+N++
Sbjct: 411  RIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDVNVKNLY 470

Query: 1064 WGKSGDMVAVSSNAFFYIMKY----VAPPRMLNAVVPVSKVTSSLQLFTVVNEQVLTGIW 897
            W  SGD+VA++S+  FYI+KY    VA        V    V  + +L   VNE+V TGIW
Sbjct: 471  WADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIW 530

Query: 896  VKDCFIYTNSACKLMSCIGGEVTTLFELDRTMDILGYCPTENTVYVMDNNFSIVGYTVLH 717
            V DCFIY NS+ +L  C+GGEVTT++ LDR M +LGY   ++ VY++D  F+++GYT+L 
Sbjct: 531  VGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLL 590

Query: 716  SVIEYKTVVIRGRPLQPWENTFLPGGPLYVMNAFCKIPIRGYNNADLAYCFLRTIPKAEW 537
            S+IEYKT+V+RG                               + + A   L +IPKA++
Sbjct: 591  SLIEYKTLVMRG-------------------------------DIERANDILPSIPKAQY 619

Query: 536  DGLARFLEHRGFLLEAMGTANDLIYSWRLAKHLGKFDLAEKYA 408
            + +A FLE RG L EA+  A D  Y + LA  LGK ++A+  A
Sbjct: 620  NNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIA 662


>gb|EEE65072.1| hypothetical protein OsJ_20099 [Oryza sativa Japonica Group]
          Length = 906

 Score =  224 bits (570), Expect = 5e-56
 Identities = 121/283 (42%), Positives = 171/283 (60%), Gaps = 4/283 (1%)
 Frame = -3

Query: 1244 RIEIFDDHFQRKKAMQPTFLVEQIFGGAMLCVSSSTLACFYDWEDHELIQKIDLSVENVF 1065
            RI+IF   FQ KK ++PTF  E+IFGG +L + SS   CFYDW D  LI++ID++V+N++
Sbjct: 406  RIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDVNVKNLY 465

Query: 1064 WGKSGDMVAVSSNAFFYIMKY----VAPPRMLNAVVPVSKVTSSLQLFTVVNEQVLTGIW 897
            W  SGD+VA++S+  FYI+KY    VA        V    V  + +L   VNE+V TGIW
Sbjct: 466  WADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIW 525

Query: 896  VKDCFIYTNSACKLMSCIGGEVTTLFELDRTMDILGYCPTENTVYVMDNNFSIVGYTVLH 717
            V DCFIY NS+ +L  C+GGEVTT++ LDR M +LGY   ++ VY++D  F+++GYT+L 
Sbjct: 526  VGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLL 585

Query: 716  SVIEYKTVVIRGRPLQPWENTFLPGGPLYVMNAFCKIPIRGYNNADLAYCFLRTIPKAEW 537
            S+IEYKT+V+RG                               + + A   L +IPKA++
Sbjct: 586  SLIEYKTLVMRG-------------------------------DIERANDILPSIPKAQY 614

Query: 536  DGLARFLEHRGFLLEAMGTANDLIYSWRLAKHLGKFDLAEKYA 408
            + +A FLE RG L EA+  A D  Y + LA  LGK ++A+  A
Sbjct: 615  NNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIA 657


>gb|EAY99623.1| hypothetical protein OsI_21602 [Oryza sativa Indica Group]
          Length = 902

 Score =  224 bits (570), Expect = 5e-56
 Identities = 121/283 (42%), Positives = 171/283 (60%), Gaps = 4/283 (1%)
 Frame = -3

Query: 1244 RIEIFDDHFQRKKAMQPTFLVEQIFGGAMLCVSSSTLACFYDWEDHELIQKIDLSVENVF 1065
            RI+IF   FQ KK ++PTF  E+IFGG +L + SS   CFYDW D  LI++ID++V+N++
Sbjct: 406  RIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDVNVKNLY 465

Query: 1064 WGKSGDMVAVSSNAFFYIMKY----VAPPRMLNAVVPVSKVTSSLQLFTVVNEQVLTGIW 897
            W  SGD+VA++S+  FYI+KY    VA        V    V  + +L   VNE+V TGIW
Sbjct: 466  WADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIW 525

Query: 896  VKDCFIYTNSACKLMSCIGGEVTTLFELDRTMDILGYCPTENTVYVMDNNFSIVGYTVLH 717
            V DCFIY NS+ +L  C+GGEVTT++ LDR M +LGY   ++ VY++D  F+++GYT+L 
Sbjct: 526  VGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLL 585

Query: 716  SVIEYKTVVIRGRPLQPWENTFLPGGPLYVMNAFCKIPIRGYNNADLAYCFLRTIPKAEW 537
            S+IEYKT+V+RG                               + + A   L +IPKA++
Sbjct: 586  SLIEYKTLVMRG-------------------------------DIERANDILPSIPKAQY 614

Query: 536  DGLARFLEHRGFLLEAMGTANDLIYSWRLAKHLGKFDLAEKYA 408
            + +A FLE RG L EA+  A D  Y + LA  LGK ++A+  A
Sbjct: 615  NNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIA 657


>ref|XP_003571107.1| PREDICTED: coatomer subunit beta'-2-like [Brachypodium distachyon]
          Length = 924

 Score =  222 bits (565), Expect = 2e-55
 Identities = 120/296 (40%), Positives = 177/296 (59%), Gaps = 5/296 (1%)
 Frame = -3

Query: 1244 RIEIFDDHFQRKKAMQPTFLVEQIFGGAMLCVSSSTLACFYDWEDHELIQKIDLSVENVF 1065
            RI+I+  +FQ +K+++PTF VE++FGG +L + ++   CFYDW D  LI++ID++V+N++
Sbjct: 416  RIKIYSKNFQERKSIRPTFSVERVFGGVLLAMCTNDFICFYDWADCRLIRRIDVNVKNLY 475

Query: 1064 WGKSGDMVAVSSNAFFYIMKY----VAPPRMLNAVVPVSKVTSSLQLFTVVNEQVLTGIW 897
            W  SGD+V V+S+  FYI+KY    V+        V    V  + +L   +NE++ TG+W
Sbjct: 476  WADSGDLVTVASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLW 535

Query: 896  VKDCFIYTNSACKLMSCIGGEVTTLFELDRTMDILGYCPTENTVYVMDNNFSIVGYTVLH 717
            V DCFIY NS+ +L  C+GGEVTTLF LDR M +LGY   ++ VY++D  F++VGYT+L 
Sbjct: 536  VGDCFIYNNSSSRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLL 595

Query: 716  SVIEYKTVVIRGRPLQPWENTFLPGGPLYVMNAFCKIPIRGYNNADLAYCFLRTIPKAEW 537
            S+IEYKT+V+RG                               + D A   L +IPK ++
Sbjct: 596  SLIEYKTLVLRG-------------------------------DFDRANEVLPSIPKEQY 624

Query: 536  DGLARFLEHRGFLLEAMGTANDLIYSWRLAKHLGKFDLAEKYAKMLENPD-WNWAG 372
            D +A FLE RG L EA+  A DL Y + LA  LG+ D A+  A  +++   W   G
Sbjct: 625  DSVAHFLESRGMLEEALEIATDLNYRFDLAVQLGRVDDAKAIALEVQSESKWKQLG 680


>ref|XP_002453525.1| hypothetical protein SORBIDRAFT_04g007330 [Sorghum bicolor]
            gi|241933356|gb|EES06501.1| hypothetical protein
            SORBIDRAFT_04g007330 [Sorghum bicolor]
          Length = 849

 Score =  220 bits (560), Expect = 7e-55
 Identities = 118/296 (39%), Positives = 176/296 (59%), Gaps = 5/296 (1%)
 Frame = -3

Query: 1244 RIEIFDDHFQRKKAMQPTFLVEQIFGGAMLCVSSSTLACFYDWEDHELIQKIDLSVENVF 1065
            RI+I+  +FQ KK+++P+F  E+IFGG +L + ++   CFYDW D  LI++ID++V+N++
Sbjct: 411  RIKIYTKNFQEKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWVDCRLIRRIDVNVKNLY 470

Query: 1064 WGKSGDMVAVSSNAFFYIMKY----VAPPRMLNAVVPVSKVTSSLQLFTVVNEQVLTGIW 897
            W  SGD+V ++S+  FYI+KY    V+             V  + +L   +NE+V TG+W
Sbjct: 471  WADSGDLVTIASDTSFYILKYNRDVVSSHLDGGGSAGEEGVEDAFELLHEINERVRTGLW 530

Query: 896  VKDCFIYTNSACKLMSCIGGEVTTLFELDRTMDILGYCPTENTVYVMDNNFSIVGYTVLH 717
            V DCFIY NS+ +L  C+GGEVTTLF LDR M +LGY   ++ VY++D  F++VGYT+L 
Sbjct: 531  VGDCFIYNNSSWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLL 590

Query: 716  SVIEYKTVVIRGRPLQPWENTFLPGGPLYVMNAFCKIPIRGYNNADLAYCFLRTIPKAEW 537
            S+IEYKT+V+RG                               + D A   L +IPK ++
Sbjct: 591  SLIEYKTLVMRG-------------------------------DFDRANDVLSSIPKEQY 619

Query: 536  DGLARFLEHRGFLLEAMGTANDLIYSWRLAKHLGKFDLAEKYAKMLENPD-WNWAG 372
            D +ARFLE RG L EA+  A D  Y + LA  LG+ ++A+  A  +++   W   G
Sbjct: 620  DSVARFLESRGMLEEALEIATDTNYKFDLAVQLGRLEIAKAIATEVQSESKWKQLG 675