BLASTX nr result

ID: Coptis21_contig00011242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011242
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34242.3| unnamed protein product [Vitis vinifera]               97   5e-18
emb|CAN77950.1| hypothetical protein VITISV_016129 [Vitis vinifera]    82   3e-13
ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-11
ref|XP_002328522.1| predicted protein [Populus trichocarpa] gi|2...    71   4e-10
gb|ABK94018.1| unknown [Populus trichocarpa]                           71   4e-10

>emb|CBI34242.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 21/286 (7%)
 Frame = -1

Query: 1033 GITNNGAEVYSEERRGVGFPNGYQENLSSSLITHSDGKKKPL---HTTSTDEGFVTKTEP 863
            G T +      E R+G G  NG+ +++   +I  + G+K+P+   +  S  E +V +TE 
Sbjct: 52   GYTTHNGPREEEWRKGAG--NGHADHVCRPVIVDAMGRKRPIVCFNPISNTETYVAQTET 109

Query: 862  VVESTHVPMATTHENASSKILAPVPPTVSPFPKVDEYVSKVQTE--ETPTYKTGPLSNLY 689
            +V  T  P  T     SS       P     P+V+++++K+QTE  E PT + GPL+ + 
Sbjct: 110  IVFRT--PAVTEWGRPSS-------PVHDRPPEVEQFITKIQTEVSEVPT-RHGPLTAMN 159

Query: 688  WWNKPCP--------------NVGKYNYSLPNDSPIKKRGKPSDGSIGSKHSDNLHGRNE 551
            W     P              N GK +Y    +S I  R  PSDG       D+ + RN+
Sbjct: 160  WRQHHNPPKALNGTGGYGEYGNYGKDDYWNKPNSNIIIRSDPSDGD------DDYYHRND 213

Query: 550  KIADGQDPKLIIANGWSGSSIIRKQAPPKGILLTKPTNFMESPTALLKESAPMTXXXXXX 371
                 ++P +  +NGW G     + A P G  LT+PT+ + +   +LKE+A  +      
Sbjct: 214  GT---KEPTITNSNGWGGRPKQAEWATPPGSKLTRPTSDIGAAVEILKEAAMPSSGQPVR 270

Query: 370  XXXXXPNSEVLPQAMDSREAARRYGGLSTDPMDNFT--TVIDSRHA 239
                 P      + +DS+EAARRYG     P  + T  T+IDS+ A
Sbjct: 271  FATPAPTVPKYAETIDSKEAARRYGNFKPTPRPDLTGGTIIDSKTA 316


>emb|CAN77950.1| hypothetical protein VITISV_016129 [Vitis vinifera]
          Length = 541

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
 Frame = -1

Query: 916 KPLHTTSTDEGFVTKTEPVVESTHVPMATTHENASSKILAPVPPTVSPFPKVDEYVSKVQ 737
           KP      DE   +    V E  H P A      SS       P     P+V+++++K+Q
Sbjct: 155 KPSSPGKVDEHKYSHPVRVEEYKHSPPANRWGRPSS-------PVHDRPPEVEQFITKIQ 207

Query: 736 TE--ETPTYKTGPLSNLYWWNKPCP--------------NVGKYNYSLPNDSPIKKRGKP 605
           TE  E PT + GPL+ + W     P              N GK +Y    +S I  R  P
Sbjct: 208 TEVSEVPT-RHGPLTAMNWRQHHNPPKALNGTGGYGEYGNYGKDDYWNKPNSNIIIRSDP 266

Query: 604 SDGSIGSKHSDNLHGRNEKIADGQDPKLIIANGWSGSSIIRKQAPPKGILLTKPTNFMES 425
           SDG       D+ + RN+     ++P +  +NGW G     + A P G  LT+PT+ + +
Sbjct: 267 SDGD------DDYYHRNDGT---KEPTITNSNGWGGRPKQAEWATPPGSKLTRPTSDIGA 317

Query: 424 PTALLKESAPMTXXXXXXXXXXXPNSEVLPQAMDSREAARRYGGLSTDPMDNFT--TVID 251
              +LKE+A  +           P      + +DS+EAARRYG     P  + T  T+ID
Sbjct: 318 AVEILKEAAMPSSGQPVRFSTPAPTVPKYAETIDSKEAARRYGNFKPTPRPDLTGGTIID 377

Query: 250 SRHAAWK 230
           S+ A  K
Sbjct: 378 SKTAQEK 384


>ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|222857979|gb|EEE95526.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
 Frame = -1

Query: 982 GFPNGY-QENLSSSLITHSDGKKKPLHTTSTDEG---FVTKTEPVVES-THVPM------ 836
           G   GY  +++   +I  +DG+K+P+ +   D+    +VTKTE   +   H PM      
Sbjct: 23  GSKTGYVPDHVCRPVIIDADGRKRPIISYRVDQNADQYVTKTETYYQQHVHPPMEYEDKE 82

Query: 835 ----ATTHENASSKILAPVPPTVSPFPKVDEYVSKVQTEETPTYKTGPLSNLYWWNKPCP 668
               +  +  A +K   P+        KV+E+++KVQ E +   +  P    Y    P  
Sbjct: 83  VPRWSEEYHGAENKFRRPLASADGRPQKVEEFITKVQIEASRPQEYAPWDASYQRQTP-K 141

Query: 667 NVGKYNYSLPNDSPIKKRGKPSDGSIGSKH--SDNLHGRNEKIADGQDPKLIIANGWSGS 494
           + G   Y+   D       K      G+ H   +N      K     +P +  + GW+  
Sbjct: 142 STGYDGYTDGYDERSGFSNKDLLKPSGNAHRNDNNYDDYYRKQGSNMEPTMNTSGGWARP 201

Query: 493 SIIRKQAPPKGILLTKPTNFMESPTALLKESAPMTXXXXXXXXXXXPNSEVLPQAMDSRE 314
           S     APP   L +  TN + +   LL+E A  +                    +DS+E
Sbjct: 202 SHSTWAAPPNAPL-SGATNDISAAVGLLREVAKPSFSTSPPSRY---REPTYANTIDSKE 257

Query: 313 AARRYGGL--STDPM---DNFTTVIDSRHAAWKYRGETL 212
           AARRYG    S+ P    D++T+ IDSR AA KYRG  +
Sbjct: 258 AARRYGNFNFSSRPYTRDDSYTSTIDSREAARKYRGSAV 296


>ref|XP_002328522.1| predicted protein [Populus trichocarpa] gi|222838237|gb|EEE76602.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 14/261 (5%)
 Frame = -1

Query: 961 ENLSSSLITHSDGKKKPLHTTSTDEG---FVTKTEPVVES-THVPMATTHEN-------- 818
           +++   +I  ++G+K P+     D+    +VTKTE + +   H P+ + ++         
Sbjct: 31  DHVCRPVIIDAEGRKMPIIFYGADKNADHYVTKTETIFQQHVHSPLESEYKQSTRLTDDP 90

Query: 817 --ASSKILAPVPPTVSPFPKVDEYVSKVQTEETPTYKTGPLSNLYWWNKPCPNVGKYNYS 644
             A  K   P+    S    V+E ++KVQT+ +P  K  P    YW   P  + G   Y 
Sbjct: 91  YGAEDKFRRPMASVNSRPQNVEESITKVQTDASPP-KIAPWDASYWRQAP-KSTGYEGYD 148

Query: 643 LPNDSPIKKRGKPSDGSIGSKHSDNLHGRNEKIADGQDPKLIIANGWSGSSIIRKQAPPK 464
             N    K   KPS  +  +   D+ +    K    ++  +I + GW+  +     A   
Sbjct: 149 ERNVFHNKDLLKPSSNAPRNDSYDDYY---RKQGSNKETTMITSGGWARPAHSTSTAE-- 203

Query: 463 GILLTKPTNFMESPTALLKESAPMTXXXXXXXXXXXPNSEVLPQAMDSREAARRYGGLST 284
              + KP+     P +  ++ A                     + MDS+EAARRYG   +
Sbjct: 204 ---VAKPSATTSPPRSRYRQPA-------------------YTETMDSKEAARRYGTRPS 241

Query: 283 DPMDNFTTVIDSRHAAWKYRG 221
              D++T+ IDSR AA KY G
Sbjct: 242 TREDSYTSTIDSREAARKYNG 262


>gb|ABK94018.1| unknown [Populus trichocarpa]
          Length = 295

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 21/278 (7%)
 Frame = -1

Query: 982 GFPNGY-QENLSSSLITHSDGKKKPLHTTSTDEG---FVTKTEPVVES-THVPM------ 836
           G   GY  +++   +I  +DG+K+P+ +   D+    +VTKTE   +   H P       
Sbjct: 23  GSKTGYVPDHVCRPVIIDADGRKRPIISYRVDQNADQYVTKTETYYQQHVHPPKEYEDKE 82

Query: 835 ----ATTHENASSKILAPVPPTVSPFPKVDEYVSKVQTEETPTYKTGPLSNLYWWNKPCP 668
               +  +  A +K   P+        KV+E+++KVQ E +   +  P    Y    P  
Sbjct: 83  VPRWSEEYHGAENKFRRPLASADGRPQKVEEFITKVQVEASRPQEYAPWDASYRRQTP-K 141

Query: 667 NVGKYNYSLPNDSPIKKRGKPSDGSIGSKH-SDNLHGRNEKIADGQDPKLIIANGWSGSS 491
           + G   Y+   D       K      G+ H +DN      K     +P +  + GW+  S
Sbjct: 142 STGYDGYTGGYDERSGFSNKDLLKPGGNAHRNDNYDDYYRKQGSNMEPTMNTSGGWARPS 201

Query: 490 IIRKQAPPKGILLTKPTNFMESPTALLKESAPMTXXXXXXXXXXXPNSEVLPQAMDSREA 311
                APP   L +  TN + +   LL+E A  +           P        +DS+EA
Sbjct: 202 HSTWAAPPNAPL-SGATNDISAAVGLLREVAKPSFSTSPPSRYREPTHA---NTIDSKEA 257

Query: 310 ARRYGGL--STDPM---DNFTTVIDSRHAAWKYRGETL 212
           ARRYG    S+ P    D++T+ IDSR AA KY G  +
Sbjct: 258 ARRYGNFNYSSRPYTRDDSYTSTIDSREAARKYSGSAV 295


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