BLASTX nr result

ID: Coptis21_contig00011239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011239
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]   190   5e-46
ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-42
ref|XP_002510598.1| conserved hypothetical protein [Ricinus comm...   174   4e-41
ref|XP_003549476.1| PREDICTED: uncharacterized protein At1g76070...   154   4e-35
ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago...   154   5e-35

>emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]
          Length = 245

 Score =  190 bits (483), Expect = 5e-46
 Identities = 122/248 (49%), Positives = 149/248 (60%), Gaps = 20/248 (8%)
 Frame = +2

Query: 197 MEKATKSKNKIFSFLPKTASV-SFHNP-PFSPGRDKR--TENLNKVKASNGGKGFSGPLR 364
           MEK  KSKN I  FLPK ASV +F N  PFSPGRD +  +++ NK KA   G+GFSGP+ 
Sbjct: 1   MEKPAKSKNMILKFLPKAASVINFQNSTPFSPGRDHKRSSDSTNKFKAHGAGRGFSGPMI 60

Query: 365 PTMIPVEARMKSKSGRTFDGQEPTSPKISCMGQIKHKKKTKDAVSKPITXXXXXXXXXXX 544
            +MIPVEA  +S+SG  FD QEPTSPK+SCMGQ+K K K +   +K  +           
Sbjct: 61  -SMIPVEAHWRSRSGN-FDRQEPTSPKVSCMGQVKDKHKKRIPKTKRASPPKESKPREMK 118

Query: 545 XSASSLRNIFSSAAKPGRKSDASAK-KPPLPDRAPSLCQMKQFTSGRDALADF------- 700
              S+LR IF S+   GRKSDAS+  KP LPDRAPSL QMK+F+SGR+A ++F       
Sbjct: 119 KQHSTLRRIFRSS-NSGRKSDASSDDKPSLPDRAPSLGQMKRFSSGRNAFSNFDWTAPVA 177

Query: 701 --------XXXXXXXXXXXXXXXXVFIAHSAPILIGSGGVDRVALEPRKEINLWKRRTMD 856
                                     I  SAPIL+G      VALEPRKEINLWKRRT+ 
Sbjct: 178 PVDSDHRSYYSDEERGDFEEEDEEFIIPFSAPILVGGA----VALEPRKEINLWKRRTLV 233

Query: 857 PPKPLQLN 880
           PP+PL+LN
Sbjct: 234 PPRPLRLN 241


>ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  177 bits (448), Expect = 6e-42
 Identities = 122/253 (48%), Positives = 146/253 (57%), Gaps = 26/253 (10%)
 Frame = +2

Query: 197 MEK-ATKSKNKIFSFLPKTAS-VSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGPLRPT 370
           MEK A    N+I  FLPK AS V+FHN  FSPGRD+R+E ++K KA N GKGF+ P R +
Sbjct: 1   MEKQAAAPPNRILKFLPKAASAVNFHNLAFSPGRDRRSEIIHKHKA-NVGKGFN-PCR-S 57

Query: 371 MIPVEARMKSKSGRTFDGQEPTSPKISCMGQIKHKKKTKDAVSKPI-----TXXXXXXXX 535
           MIPVE R + K+      +EPTSPKISCMGQIKHKKK   A  K +     T        
Sbjct: 58  MIPVEVRRQPKNESFETQEEPTSPKISCMGQIKHKKKMNKATYKRVSLPQETKPASQTQR 117

Query: 536 XXXXSASSLRNIFSSAAKPGRKSDA-SAKKPPLPDRAPSLCQMKQFTSGRDALADF---- 700
                AS L+ +F + +K GRKS+A    KP LPDRAPSL QMK+F SGRD LA F    
Sbjct: 118 QVMKHASKLKRLF-TGSKAGRKSNAFDGGKPTLPDRAPSLSQMKRFASGRDTLASFDWTA 176

Query: 701 --------------XXXXXXXXXXXXXXXXVFIAHSAPILIGSGGVDRVALEPRKEINLW 838
                                         V I  SAP+++G GGVD   L PRKE+NLW
Sbjct: 177 HQIAPVEPVGRDYYSDEERGDSFEDQEDEEVIIPFSAPMVLG-GGVD---LLPRKEVNLW 232

Query: 839 KRRTMDPPKPLQL 877
           KRRTMDPP+PL+L
Sbjct: 233 KRRTMDPPEPLRL 245


>ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis]
           gi|223551299|gb|EEF52785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score =  174 bits (441), Expect = 4e-41
 Identities = 118/269 (43%), Positives = 150/269 (55%), Gaps = 42/269 (15%)
 Frame = +2

Query: 200 EKATKSKNKIFSFLPKTAS-VSFHNPPFSPGRDKRTENL-----NKVKASNGGKGFSGPL 361
           ++A K KNKI  FLPK AS VSF NPPFSPGRDKR         N+VK S+ GKG+SGP+
Sbjct: 6   QQAAKPKNKILKFLPKAASAVSFQNPPFSPGRDKRIPEYHQHFHNRVK-SHVGKGYSGPI 64

Query: 362 RPTMIPVEARMKSKSGRTFDGQEPTSPKISCMGQIKHKKKTKDAVSK----------PIT 511
             ++IP EAR ++    +F+  EPTSPKISCMGQIKHKKK  ++ SK            +
Sbjct: 65  -VSIIPDEARRRTSKNGSFENHEPTSPKISCMGQIKHKKKIINSSSKNKAKNQETEPEKS 123

Query: 512 XXXXXXXXXXXXSASSLRNIFSSAAK----PGRKSDASA-KKPPLPD---RAPSLCQMKQ 667
                        A +++ +FS+A K      R+SDAS   KPPL D   RAP+L Q+K+
Sbjct: 124 TSTSTPRREIKKHALTIKRMFSNAVKVPEHGRRRSDASMYDKPPLTDTSHRAPALSQLKR 183

Query: 668 FTSGRDALADF------------------XXXXXXXXXXXXXXXXVFIAHSAPILIGSGG 793
           F SGRD  A+F                                  V I  SAPI++G G 
Sbjct: 184 FASGRDTFANFDWTSQVVPAESDHRNYYSDDEEEERHSDHDYDEDVIIPFSAPIIVGPGV 243

Query: 794 VDRVALEPRKEINLWKRRTMDPPKPLQLN 880
            +   L+PRKE+NLW+RRTM+PPKPLQLN
Sbjct: 244 GN---LQPRKEVNLWRRRTMNPPKPLQLN 269


>ref|XP_003549476.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]
          Length = 228

 Score =  154 bits (389), Expect = 4e-35
 Identities = 98/236 (41%), Positives = 129/236 (54%), Gaps = 4/236 (1%)
 Frame = +2

Query: 185 TNTPMEKATKSKNKIFSFLPKTA--SVSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGP 358
           T    EK +K KNKIF  LPK A  SV+F NPPFSPGRD + ++        GGKGF   
Sbjct: 2   TEKEKEKKSKLKNKIFKILPKAAAMSVTFQNPPFSPGRDHKCKHY-------GGKGF--- 51

Query: 359 LRPTMIPVEARMKSKSGRTFDGQEPTSPKISCMGQIKHKKKTKDAVSKPITXXXXXXXXX 538
               MIP EAR K+K+G   + QEPTSPKISCMGQIKHKK    A +  ++         
Sbjct: 52  FSGRMIPDEARRKAKNGHGVETQEPTSPKISCMGQIKHKK--GGAKNMSMSMPTPRDPEV 109

Query: 539 XXXSASSLRNIFSSAAKPGRKSDASAKKPPLPDRAPSLCQMKQFTSGRDALA--DFXXXX 712
              ++   R +   A KP ++SDA  +    P  AP +  M++F SGR+  +  D+    
Sbjct: 110 KKHASKFQRMLLFHAGKP-KQSDADVESERAP--APPMGHMRRFASGRETFSNFDWKAQI 166

Query: 713 XXXXXXXXXXXXVFIAHSAPILIGSGGVDRVALEPRKEINLWKRRTMDPPKPLQLN 880
                       + I  SAP+ +G      + ++PRKEINLWKRRTM PP+PL+LN
Sbjct: 167 APHDDVDRLDDEIIIPFSAPLTLGGATALNLNVQPRKEINLWKRRTMAPPRPLKLN 222


>ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]
           gi|355492883|gb|AES74086.1| Syringolide-induced protein
           14-1-1 [Medicago truncatula]
          Length = 245

 Score =  154 bits (388), Expect = 5e-35
 Identities = 108/254 (42%), Positives = 135/254 (53%), Gaps = 26/254 (10%)
 Frame = +2

Query: 197 MEKATKSKNKIFSFLPKTASVSFHNPPFSPGRD--KRTENLNKVKASNGGKGFSGPLRPT 370
           MEK  K +NKI   LPKT +++F N PFSPGRD   R +N  K    +G KGFSGP++ +
Sbjct: 1   MEKNLKLRNKILKILPKTITINFQNHPFSPGRDHKSRQDNATKWARPHGVKGFSGPIQ-S 59

Query: 371 MIPVEARMKSKSGRTFDGQEPTSPKISCMGQIKHK----KKTKD-AVSKPITXXXXXXXX 535
           +IP EAR KSK     D +EPTSPKISCMGQIKHK    KK+KD  V K +         
Sbjct: 60  IIPREARRKSKDINGIDYEEPTSPKISCMGQIKHKKKQIKKSKDMEVKKHVNTF------ 113

Query: 536 XXXXSASSLRNIFSSAAKPGRKSDASA---KKPPLPDRAPSLCQMKQFTSGRDALADF-- 700
                   L ++    ++  RKSDA A   KK  + +RA  + QMK+F SGRD  A+F  
Sbjct: 114 -----QKMLFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVSQMKRFASGRDTFANFDW 168

Query: 701 -------------XXXXXXXXXXXXXXXXVFIAHSAPILIGSGGVD-RVALEPRKEINLW 838
                                          I  SAP+  G G     + L+PRKEINLW
Sbjct: 169 KAQVAPEEIDNYYSDEERMQSDDDDDEEEFKIPFSAPLGGGVGACSLGLDLKPRKEINLW 228

Query: 839 KRRTMDPPKPLQLN 880
           KRRTM PP+PLQL+
Sbjct: 229 KRRTMAPPRPLQLD 242


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