BLASTX nr result

ID: Coptis21_contig00011233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011233
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633954.1| PREDICTED: transcription factor ASG4-like [V...   378   e-102
gb|ABV02070.1| transcription factor 1R-MYB1 [Chimonanthus praecox]    366   7e-99
ref|XP_002320823.1| predicted protein [Populus trichocarpa] gi|2...   364   4e-98
ref|XP_002273319.2| PREDICTED: transcription factor ASG4-like [V...   363   8e-98
emb|CBI22649.3| unnamed protein product [Vitis vinifera]              362   1e-97

>ref|XP_003633954.1| PREDICTED: transcription factor ASG4-like [Vitis vinifera]
            gi|297745319|emb|CBI40399.3| unnamed protein product
            [Vitis vinifera]
          Length = 328

 Score =  378 bits (970), Expect = e-102
 Identities = 211/371 (56%), Positives = 246/371 (66%), Gaps = 4/371 (1%)
 Frame = +3

Query: 9    MVSVNPNHPSEGGFFIDPSITMSASLPGLNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
            MVSVNPN P   GF++DP   M   LP L S                             
Sbjct: 1    MVSVNPNPPQ--GFYLDP---MQMGLPALGS----------------------------- 26

Query: 189  XXXXXXXXXXXASLEDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFV 368
                       +S ED +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFV
Sbjct: 27   LQPTTASVAASSSSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFV 86

Query: 369  GSKTVIQIRSHAQKYFIKVQKNGTSEHVXXXXXXXXXXXXXXQKAIKNAPVLSQVIGAVQ 548
            GSKTVIQIRSHAQKYF+KVQKNGTSEHV              QKA KNAPV  Q   A Q
Sbjct: 87   GSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNAPVFPQDTMAFQ 146

Query: 549  SSSAMLEPGFVMRPDSSTMLRNSTTSPAVSSWAPNSIPP--VSHVTKDDLGSAGPAVAAN 722
            +S+ +LEPGFV+RPDSS++LRN   + A+SSW  NS PP  VSHVTKD++G AGPA+  N
Sbjct: 147  TSATLLEPGFVLRPDSSSVLRNPMNNAALSSWTYNSQPPVSVSHVTKDEVGLAGPAMQHN 206

Query: 723  --CCSSTESTPRACPIRETTDKGNHAPSLRVMPDFAQVYGFIGNVFDPNRSGHLQKLKQM 896
              C SS ESTPR+ PI +T D+GN +  +RVMPDFAQVY FIG+VFDPN SGHLQKLK M
Sbjct: 207  NCCSSSNESTPRSWPICKTHDQGNQSLPIRVMPDFAQVYSFIGSVFDPNGSGHLQKLKNM 266

Query: 897  DPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDVDSEKTEAGGANNIGVCRST*EGAA 1076
            DPI++ETVLLLMRNL+INL+SP+F DHR+LLSSYD D EK ++    +I           
Sbjct: 267  DPINMETVLLLMRNLTINLTSPEFADHRKLLSSYDADFEKAKSSSTRSI----------- 315

Query: 1077 YVHIGKEKQEV 1109
             +H+GK +  +
Sbjct: 316  -LHVGKSESAI 325


>gb|ABV02070.1| transcription factor 1R-MYB1 [Chimonanthus praecox]
          Length = 318

 Score =  366 bits (940), Expect = 7e-99
 Identities = 205/338 (60%), Positives = 230/338 (68%), Gaps = 4/338 (1%)
 Frame = +3

Query: 9    MVSVNPNHPSEGGF-FIDPSITMSASLPGLNSPPXXXXXXXXXXXXXXXXXXXXXXXXXX 185
            MVSVNP  PSEG F  +DP   +  +LPG+ S                            
Sbjct: 1    MVSVNP--PSEGLFPELDP---LEMALPGIGS---------------------------- 27

Query: 186  XXXXXXXXXXXXASLEDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF 365
                        +S ED +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF
Sbjct: 28   -----LATNPSTSSSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF 82

Query: 366  VGSKTVIQIRSHAQKYFIKVQKNGTSEHVXXXXXXXXXXXXXXQKAIKNAPVLSQVIGAV 545
            VGSKTVIQIRSHAQKYF+KVQKNGTSEHV              QKA KNAPV SQ     
Sbjct: 83   VGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNAPVPSQATAPF 142

Query: 546  QSSSAMLEPGFVMRPDSSTMLRNSTTSPAVSSWAPNSIPPV--SHVTKDDLGSAGPAVAA 719
            QSSS +LEPG+ +R DSS+MLR  T S A+SSWA NS PPV  S V KDD+   GP +  
Sbjct: 143  QSSSCVLEPGYGLRTDSSSMLRTPTPSAAMSSWAHNSFPPVNLSQVMKDDIDPVGPVLVN 202

Query: 720  N-CCSSTESTPRACPIRETTDKGNHAPSLRVMPDFAQVYGFIGNVFDPNRSGHLQKLKQM 896
            N  CSSTES PR  P  + TD+GNH PSLRVMPDF QVY FIG+VFDPN SGHLQKLK+M
Sbjct: 203  NYSCSSTESPPRTLPTCQMTDQGNHGPSLRVMPDFGQVYNFIGSVFDPNSSGHLQKLKEM 262

Query: 897  DPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDVDS 1010
            DPI+VE V+LLMRNLS+NLSSPDFE+HRRLLS+YD+ +
Sbjct: 263  DPINVEAVVLLMRNLSVNLSSPDFENHRRLLSTYDLQT 300


>ref|XP_002320823.1| predicted protein [Populus trichocarpa] gi|222861596|gb|EEE99138.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  364 bits (934), Expect = 4e-98
 Identities = 205/347 (59%), Positives = 232/347 (66%), Gaps = 5/347 (1%)
 Frame = +3

Query: 9    MVSVNPNHPSEGGFFIDPSITMS-ASLPGLNSPPXXXXXXXXXXXXXXXXXXXXXXXXXX 185
            MVSVNPN P+ G +F DP    S   LPG+N  P                          
Sbjct: 1    MVSVNPN-PALGFYFFDPMNNSSHMELPGVNFLPPTNTNTATDTCNDTVSAANTTTTTNN 59

Query: 186  XXXXXXXXXXXXASLEDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF 365
                           ED +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF
Sbjct: 60   NNHKLVSFS------EDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAF 113

Query: 366  VGSKTVIQIRSHAQKYFIKVQKNGTSEHVXXXXXXXXXXXXXXQKAIKNAPVLSQVIGAV 545
            VGSKTVIQIRSHAQKYF+KVQK+GTSEHV              QKA K+A V SQV G+ 
Sbjct: 114  VGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKSAAVASQVTGSF 173

Query: 546  QSSSAMLEPGFVMRPDSSTMLRNSTTSPAVSSWAPNSIPPV--SHVTKDDLGSAGPAVAA 719
            QSSSA+LEPG++ RPDS+++L N  TS A+S+W+ NS+PPV  S +T DD G AGP +A 
Sbjct: 174  QSSSALLEPGYLYRPDSTSVLGNPITSGALSTWSFNSVPPVSMSQMTNDDAGLAGPTIAN 233

Query: 720  NCC--SSTESTPRACPIRETTDKGNHAPSLRVMPDFAQVYGFIGNVFDPNRSGHLQKLKQ 893
             CC  SS ES  R     +  DK       RVMPDFAQVY FIGNVFDPN S HLQ+LKQ
Sbjct: 234  KCCYSSSNESASRTWQTGKIIDKRAQGKPERVMPDFAQVYSFIGNVFDPNGSDHLQRLKQ 293

Query: 894  MDPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDVDSEKTEAGGA 1034
            MDPI++ETVLLLMRNLSINL+SP+FEDHRRLL+SYDVDSEK   GGA
Sbjct: 294  MDPINLETVLLLMRNLSINLTSPEFEDHRRLLASYDVDSEKVNEGGA 340


>ref|XP_002273319.2| PREDICTED: transcription factor ASG4-like [Vitis vinifera]
          Length = 337

 Score =  363 bits (931), Expect = 8e-98
 Identities = 199/347 (57%), Positives = 231/347 (66%), Gaps = 3/347 (0%)
 Frame = +3

Query: 9    MVSVNPNHPSEGGFFIDPSITMSASLPGLNSPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
            MVSV P+ PS   F+ DP+   S +LPGL                               
Sbjct: 1    MVSVIPS-PSSEAFYFDPA---SMALPGLGP---------------------------FA 29

Query: 189  XXXXXXXXXXXASLEDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFV 368
                       +SLED +KK RKPYTITK RE WTE EHDKFLEALQLFDRDWKKIEAFV
Sbjct: 30   TTAAAAAAATTSSLEDPAKKIRKPYTITKCREKWTEPEHDKFLEALQLFDRDWKKIEAFV 89

Query: 369  GSKTVIQIRSHAQKYFIKVQKNGTSEHVXXXXXXXXXXXXXXQKAIKNAPVLSQVIGAVQ 548
            GSKTVIQIRSHAQKYF+KVQKNG +EH+               KA KNAPVLSQ  G+  
Sbjct: 90   GSKTVIQIRSHAQKYFLKVQKNGINEHLPPPRPKRKAAHPYPHKASKNAPVLSQGTGSFH 149

Query: 549  SSSAMLEPGFVMRPDSSTMLRNSTTSPAVSSWA---PNSIPPVSHVTKDDLGSAGPAVAA 719
            SS+A+ E G+V+RPDSS++LRN  TS A SSW    P     +SHV K D+ SAGP V  
Sbjct: 150  SSAALRETGYVLRPDSSSILRNPITSAAASSWTNSKPAQTVGLSHVAKGDMRSAGPTVPN 209

Query: 720  NCCSSTESTPRACPIRETTDKGNHAPSLRVMPDFAQVYGFIGNVFDPNRSGHLQKLKQMD 899
            NCCSS ESTPR     E +++GNH  +LRV+PDF QVY FIG+VFDPN +GHLQKLK+MD
Sbjct: 210  NCCSSAESTPRGRTTVEASEQGNHVHTLRVLPDFVQVYRFIGSVFDPNSTGHLQKLKKMD 269

Query: 900  PIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDVDSEKTEAGGANN 1040
            PIDVETVLLLMRNLSINL+SPDFEDHR+LLS+Y++DSE T  G  +N
Sbjct: 270  PIDVETVLLLMRNLSINLTSPDFEDHRKLLSTYEIDSETTSHGVESN 316


>emb|CBI22649.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  362 bits (930), Expect = 1e-97
 Identities = 184/276 (66%), Positives = 212/276 (76%), Gaps = 3/276 (1%)
 Frame = +3

Query: 222  ASLEDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSH 401
            +SLED +KK RKPYTITK RE WTE EHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSH
Sbjct: 22   SSLEDPAKKIRKPYTITKCREKWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSH 81

Query: 402  AQKYFIKVQKNGTSEHVXXXXXXXXXXXXXXQKAIKNAPVLSQVIGAVQSSSAMLEPGFV 581
            AQKYF+KVQKNG +EH+               KA KNAPVLSQ  G+  SS+A+ E G+V
Sbjct: 82   AQKYFLKVQKNGINEHLPPPRPKRKAAHPYPHKASKNAPVLSQGTGSFHSSAALRETGYV 141

Query: 582  MRPDSSTMLRNSTTSPAVSSWA---PNSIPPVSHVTKDDLGSAGPAVAANCCSSTESTPR 752
            +RPDSS++LRN  TS A SSW    P     +SHV K D+ SAGP V  NCCSS ESTPR
Sbjct: 142  LRPDSSSILRNPITSAAASSWTNSKPAQTVGLSHVAKGDMRSAGPTVPNNCCSSAESTPR 201

Query: 753  ACPIRETTDKGNHAPSLRVMPDFAQVYGFIGNVFDPNRSGHLQKLKQMDPIDVETVLLLM 932
                 E +++GNH  +LRV+PDF QVY FIG+VFDPN +GHLQKLK+MDPIDVETVLLLM
Sbjct: 202  GRTTVEASEQGNHVHTLRVLPDFVQVYRFIGSVFDPNSTGHLQKLKKMDPIDVETVLLLM 261

Query: 933  RNLSINLSSPDFEDHRRLLSSYDVDSEKTEAGGANN 1040
            RNLSINL+SPDFEDHR+LLS+Y++DSE T  G  +N
Sbjct: 262  RNLSINLTSPDFEDHRKLLSTYEIDSETTSHGVESN 297


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