BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011212
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplas...   574   e-161
ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157
ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2,...   559   e-157
sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransfera...   557   e-156
sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransfera...   556   e-156

>ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis] gi|223531082|gb|EEF32932.1| Aspartate
            carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis]
          Length = 360

 Score =  574 bits (1480), Expect = e-161
 Identities = 296/347 (85%), Positives = 320/347 (92%), Gaps = 2/347 (0%)
 Frame = +3

Query: 156  SFSTLTSEKLRT--RCHALETEKVLNTDKPFSFSAGDKFQLQDILDAQQFDRDILNAIFK 329
            SFS +    +R+  RC ALE   + N D    FS G++FQL+D+++AQQFDR+ILNAIF+
Sbjct: 19   SFSPVLRPLIRSGVRCSALE---IGNAD--LLFSTGNRFQLEDVIEAQQFDREILNAIFE 73

Query: 330  VARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSS 509
            VAR+ME IEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSS
Sbjct: 74   VAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSS 133

Query: 510  AAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDV 689
            AAKGETLEDTIRTVEGYSDIIV+RHFESGAARRAA TA IPVINAGDGPGQHP+QALLDV
Sbjct: 134  AAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTACIPVINAGDGPGQHPTQALLDV 193

Query: 690  YTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYL 869
            YTI REIGKLDGIKV LVGDLANGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYL
Sbjct: 194  YTIDREIGKLDGIKVALVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYL 253

Query: 870  TSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKH 1049
             S+GVEWEES DLMEVAS+CDVVYQTRIQRERFGERIDLYE+ARGKYIVD+ VL+VMQKH
Sbjct: 254  ASRGVEWEESADLMEVASKCDVVYQTRIQRERFGERIDLYEEARGKYIVDSDVLNVMQKH 313

Query: 1050 AIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 1190
            A+VMHPLPRLDEITVDVD DPRAAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 314  AVVMHPLPRLDEITVDVDVDPRAAYFRQAKNGLYIRMALLKLLLVGW 360


>ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|222847589|gb|EEE85136.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  561 bits (1447), Expect = e-157
 Identities = 283/336 (84%), Positives = 311/336 (92%)
 Frame = +3

Query: 183  LRTRCHALETEKVLNTDKPFSFSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKN 362
            +R+R H+    ++L      SFSAG KFQL D+++AQQFDR+IL  IF+VA +ME +EKN
Sbjct: 1    MRSRIHS----QLLGIQNTPSFSAGKKFQLDDLIEAQQFDREILADIFEVAHEMEKVEKN 56

Query: 363  SPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTI 542
            SPGSQ+LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTI
Sbjct: 57   SPGSQVLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTI 116

Query: 543  RTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLD 722
            RTVEGYSDIIV+RHFESGAA+RAA TA +PVINAGDGPGQHP+QALLDVYTI REIGKLD
Sbjct: 117  RTVEGYSDIIVMRHFESGAAKRAAATAEVPVINAGDGPGQHPTQALLDVYTIDREIGKLD 176

Query: 723  GIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEEST 902
            GIKV LVGDLANGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYLTSK VEWEES 
Sbjct: 177  GIKVALVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSKRVEWEESA 236

Query: 903  DLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLD 1082
            DLMEVAS+CDV+YQTRIQRERFG+RIDLYE+ARGKYIVD+ VL+VMQ HA+VMHPLPRLD
Sbjct: 237  DLMEVASKCDVLYQTRIQRERFGKRIDLYEEARGKYIVDHDVLNVMQNHAVVMHPLPRLD 296

Query: 1083 EITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 1190
            EITVDVD+DPRAAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 297  EITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 332


>ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2, chloroplastic-like
            [Vitis vinifera]
          Length = 403

 Score =  559 bits (1441), Expect = e-157
 Identities = 280/315 (88%), Positives = 300/315 (95%)
 Frame = +3

Query: 246  FSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPST 425
            FS G+KFQL D+++AQQFDR+ L+AIF+VAR+ME +EK SPGSQILKGYLMATLFYEPST
Sbjct: 89   FSVGNKFQLDDVIEAQQFDRETLSAIFEVAREMEKVEKKSPGSQILKGYLMATLFYEPST 148

Query: 426  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAAR 605
            RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV+RHFESGAAR
Sbjct: 149  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAR 208

Query: 606  RAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAY 785
            RAAVTA IP+INAGDGPGQHP+QALLDVYTI REIG+LD IKVGLVGDLANGRTVRSLAY
Sbjct: 209  RAAVTAEIPIINAGDGPGQHPTQALLDVYTIEREIGRLDRIKVGLVGDLANGRTVRSLAY 268

Query: 786  LLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRER 965
            LL+KYQ+VKIYFV+P+VVKMKDDIKDYLTSKGVEWEES DLMEVAS+CDVVYQTRIQRER
Sbjct: 269  LLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVEWEESADLMEVASKCDVVYQTRIQRER 328

Query: 966  FGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNG 1145
            FGER DLYE+ARGKYIVD  VL VMQKHA+VMHPLPRLDEITVDVD D RAAYFRQAKNG
Sbjct: 329  FGERADLYEEARGKYIVDRDVLGVMQKHAVVMHPLPRLDEITVDVDEDQRAAYFRQAKNG 388

Query: 1146 LYIRMALLKLLLVGW 1190
            LYIRMALLKLLLVGW
Sbjct: 389  LYIRMALLKLLLVGW 403


>sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransferase 3, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 3; Short=ATCase
            3; Flags: Precursor gi|609344|gb|AAB67857.1| aspartate
            carbamoyltransferase [Pisum sativum]
          Length = 391

 Score =  557 bits (1435), Expect = e-156
 Identities = 279/359 (77%), Positives = 320/359 (89%), Gaps = 13/359 (3%)
 Frame = +3

Query: 153  SSFSTLTSEKLRTRCHAL----------ETEKVLNT---DKPFSFSAGDKFQLQDILDAQ 293
            S  S + +  L++ C+ +          + +K++ T   D    FS G KFQL D+++AQ
Sbjct: 33   SKISYVETNYLKSTCYPISRFLCINNLSKCDKMIKTRQRDGIHCFSEGQKFQLDDVIEAQ 92

Query: 294  QFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGE 473
            QFDRDILNAIF++AR ME+IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGE
Sbjct: 93   QFDRDILNAIFEIARDMENIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGE 152

Query: 474  VLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDG 653
            VLTTENAREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDG
Sbjct: 153  VLTTENAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAAIAGIPIVNAGDG 212

Query: 654  PGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPD 833
            PGQHPSQALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSLAYLL+KY++VKIYFV+P+
Sbjct: 213  PGQHPSQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPE 272

Query: 834  VVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYI 1013
            VVKMKDDIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+I
Sbjct: 273  VVKMKDDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFI 332

Query: 1014 VDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 1190
            V+  +L+ MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 333  VNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 391


>sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransferase 2, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 2; Short=ATCase
            2; Flags: Precursor gi|495661|gb|AAA62444.1| aspartate
            transcarbamoylase [Pisum sativum]
          Length = 385

 Score =  556 bits (1433), Expect = e-156
 Identities = 278/353 (78%), Positives = 314/353 (88%), Gaps = 7/353 (1%)
 Frame = +3

Query: 153  SSFSTLTSEKLRTRCHALET-------EKVLNTDKPFSFSAGDKFQLQDILDAQQFDRDI 311
            S  S + +  L++ C+ +         +K    D    FS G KFQL D+++AQQFDRDI
Sbjct: 33   SKISYVETNYLKSTCYPISRFFCINNLKKTRQRDGIHCFSEGQKFQLDDVVEAQQFDRDI 92

Query: 312  LNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTEN 491
            LNAIF+VAR ME IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGEVLTTEN
Sbjct: 93   LNAIFEVARDMEKIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGEVLTTEN 152

Query: 492  AREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPS 671
            AREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDGPGQHPS
Sbjct: 153  AREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAATIAGIPIVNAGDGPGQHPS 212

Query: 672  QALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKD 851
            QALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSL YLL+KY++VKIYFV+P+VVKMKD
Sbjct: 213  QALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLTYLLAKYKDVKIYFVSPEVVKMKD 272

Query: 852  DIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVL 1031
            DIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+IV+  +L
Sbjct: 273  DIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQNIL 332

Query: 1032 SVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 1190
            + MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 333  NAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 385