BLASTX nr result

ID: Coptis21_contig00011211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011211
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21500.3| unnamed protein product [Vitis vinifera]              119   3e-39
ref|XP_002280199.1| PREDICTED: uncharacterized protein LOC100256...   119   3e-39
gb|ABK25975.1| unknown [Picea sitchensis]                             118   8e-29
ref|XP_002310021.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27
ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana] ...   127   5e-27

>emb|CBI21500.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score =  119 bits (299), Expect(2) = 3e-39
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -1

Query: 631 QWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMA 452
           QWNLT+RHI +LN +A   AIS +WLF SAIP LLAF++AA SLEKL+DV REELP TMA
Sbjct: 98  QWNLTHRHIEVLNVIALATAISATWLFCSAIPTLLAFKRAAESLEKLLDVTREELPGTMA 157

Query: 451 AVRLSGMEISDLTMELSD 398
           AVRLSGMEISDLTMELSD
Sbjct: 158 AVRLSGMEISDLTMELSD 175



 Score = 69.3 bits (168), Expect(2) = 3e-39
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -2

Query: 276 NLKTEAIEPVLAKTARGLREGIVKGRAFLQMFFSITRFSRLAMNYLAAR 130
           N K EA +P+LA+TARG++EGIVKGR+F Q+FF++TR S++A NY A R
Sbjct: 215 NQKIEAADPLLARTARGIKEGIVKGRSFFQLFFTLTRLSKMAFNYFATR 263


>ref|XP_002280199.1| PREDICTED: uncharacterized protein LOC100256131 [Vitis vinifera]
           gi|147858475|emb|CAN81396.1| hypothetical protein
           VITISV_013367 [Vitis vinifera]
          Length = 248

 Score =  119 bits (299), Expect(2) = 3e-39
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -1

Query: 631 QWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMA 452
           QWNLT+RHI +LN +A   AIS +WLF SAIP LLAF++AA SLEKL+DV REELP TMA
Sbjct: 80  QWNLTHRHIEVLNVIALATAISATWLFCSAIPTLLAFKRAAESLEKLLDVTREELPGTMA 139

Query: 451 AVRLSGMEISDLTMELSD 398
           AVRLSGMEISDLTMELSD
Sbjct: 140 AVRLSGMEISDLTMELSD 157



 Score = 69.3 bits (168), Expect(2) = 3e-39
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -2

Query: 276 NLKTEAIEPVLAKTARGLREGIVKGRAFLQMFFSITRFSRLAMNYLAAR 130
           N K EA +P+LA+TARG++EGIVKGR+F Q+FF++TR S++A NY A R
Sbjct: 197 NQKIEAADPLLARTARGIKEGIVKGRSFFQLFFTLTRLSKMAFNYFATR 245


>gb|ABK25975.1| unknown [Picea sitchensis]
          Length = 262

 Score =  118 bits (296), Expect(2) = 8e-29
 Identities = 59/77 (76%), Positives = 66/77 (85%)
 Frame = -1

Query: 628 WNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMAA 449
           WNLT+RH+ LLN +ACV A+S S LFF+AIP L+AFRKAA SL  L+DV REELP TMAA
Sbjct: 85  WNLTHRHLLLLNVIACVVAVSASCLFFAAIPTLIAFRKAAESLANLLDVTREELPGTMAA 144

Query: 448 VRLSGMEISDLTMELSD 398
           VRLSGMEISDLTMELSD
Sbjct: 145 VRLSGMEISDLTMELSD 161



 Score = 35.4 bits (80), Expect(2) = 8e-29
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = -2

Query: 285 EQVNLKTEAIEPVLAKTARGLREGIVKGRAFLQMFFSITRFSRLAMNYLAARKQKL 118
           ++  +  + ++P +A+TAR L +GIV+GR+ L+   +  + S     Y   +++ L
Sbjct: 198 DRAKVHADIMKPAIARTARSLHDGIVQGRSTLKSLIAFNQLSGWLSRYWFQKRKHL 253


>ref|XP_002310021.1| predicted protein [Populus trichocarpa] gi|222852924|gb|EEE90471.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  129 bits (323), Expect = 1e-27
 Identities = 62/78 (79%), Positives = 70/78 (89%)
 Frame = -1

Query: 631 QWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMA 452
           QWNLT+RH+ +LN +AC AA+S +WLF SAIP LLAF++AA SLEKLMDV REELPDTMA
Sbjct: 36  QWNLTHRHVLVLNVIACAAAVSATWLFLSAIPTLLAFKRAAESLEKLMDVTREELPDTMA 95

Query: 451 AVRLSGMEISDLTMELSD 398
           AVRLSGMEISDLTMELSD
Sbjct: 96  AVRLSGMEISDLTMELSD 113



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/51 (60%), Positives = 40/51 (78%)
 Frame = -2

Query: 273 LKTEAIEPVLAKTARGLREGIVKGRAFLQMFFSITRFSRLAMNYLAARKQK 121
           LK E   P LA+TARG+REGIVKGR+ LQ+FF+I +FSR+A NY A + +K
Sbjct: 154 LKNETGGPALARTARGMREGIVKGRSILQIFFTIIQFSRMAFNYFAKQNKK 204


>ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004094|gb|AED91477.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  127 bits (318), Expect = 5e-27
 Identities = 63/78 (80%), Positives = 67/78 (85%)
 Frame = -1

Query: 631 QWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMA 452
           QW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL+DV REELPDTMA
Sbjct: 88  QWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKLLDVTREELPDTMA 147

Query: 451 AVRLSGMEISDLTMELSD 398
           AVRLSGMEISDLTMELSD
Sbjct: 148 AVRLSGMEISDLTMELSD 165



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -2

Query: 270 KTEAIEPVLAKTARGLREGIVKGRAFLQMFFSITRFSRLAMNYLAARKQK 121
           KT+  EP+LAK AR  REG+VKGR+  Q+F +ITRFS++  +YLA R ++
Sbjct: 208 KTDETEPMLAKQARSFREGVVKGRSLWQLFSTITRFSKITTSYLAKRAKQ 257


Top