BLASTX nr result
ID: Coptis21_contig00011198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011198
(1689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 288 3e-75
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 286 9e-75
gb|AAM61481.1| unknown [Arabidopsis thaliana] 286 2e-74
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 281 4e-73
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495... 247 8e-63
>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 288 bits (737), Expect = 3e-75
Identities = 163/385 (42%), Positives = 221/385 (57%), Gaps = 31/385 (8%)
Frame = -3
Query: 1339 ERNWPRPSEIPWQGKVANVVNLIGRVSMPVQFQVSADGKSWAGTILTQESSSSDGLLWIP 1160
E+ P +I ++ +++N +NLIG V PVQF +DGK WAGT+++Q S S WIP
Sbjct: 65 EKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIP 124
Query: 1159 IIFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESTQR 980
IIFEGDLA IA H+K++D +HVSG+L D P + S+ S++QVMV +NFV+ +T
Sbjct: 125 IIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQ-SNVQVMVQNLNFVQAATST 183
Query: 979 KESHASYKQNEQAXXXXXXXXXXXSMPITEDKKDSTTTEHLWTDLLENPHEWWDNRLNKN 800
++ S + E I E+ T + W L+ENP EW D+R NK
Sbjct: 184 TKT-ISPPEKEVTSIKKKPARSKKVKVIDEE------TSNSWKHLIENPKEWLDHRGNKA 236
Query: 799 N--LKGA--DFNHKVKGEKLWLDESTPGWVVSKLESLNFINKTVQKSQKSVNGVKDRESV 632
N +K DF KV G LWL + P W + KLE L F + V K +N +KD
Sbjct: 237 NGLVKPGHPDFKMKVGGLSLWL-STAPDWALLKLEELKF-DVLVPKGNIKLNQLKD--IG 292
Query: 631 ESSWRDLIYNPNRWRDHRKEKLNGQVNPKFPDFKHKDGGQALWISSAPKWVLSNLDALKF 452
E SW+DL+ NP++W D+R +K N K+PDFKHK+ G+ALW++++P WVLS L LK
Sbjct: 293 EESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKK 348
Query: 451 DD---------------------------KENSWKDLVENPNKWWDNRFDKLNQRAPDFK 353
+ +E WK+LVENP+KWWDNR DK N + PDFK
Sbjct: 349 NQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFK 408
Query: 352 HKETGEGLWLGGSPDWVMPKLPPVK 278
HKETGE LW+G SP W + KLPP+K
Sbjct: 409 HKETGEALWIGDSPTWALSKLPPLK 433
>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
protein [Arabidopsis thaliana] gi|28973013|gb|AAO63831.1|
unknown protein [Arabidopsis thaliana]
gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis
thaliana] gi|110743279|dbj|BAE99530.1| hypothetical
protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
thaliana]
Length = 440
Score = 286 bits (733), Expect = 9e-75
Identities = 162/385 (42%), Positives = 220/385 (57%), Gaps = 31/385 (8%)
Frame = -3
Query: 1339 ERNWPRPSEIPWQGKVANVVNLIGRVSMPVQFQVSADGKSWAGTILTQESSSSDGLLWIP 1160
E+ P +I ++ +++N +NLIG V PVQF +DGK WAGT+++Q S S WIP
Sbjct: 65 EKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIP 124
Query: 1159 IIFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESTQR 980
IIFEGDLA IA H+K++D +HVSG+L D P + S+ S++QVMV +NFV+ +T
Sbjct: 125 IIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQ-SNVQVMVQNLNFVQAATST 183
Query: 979 KESHASYKQNEQAXXXXXXXXXXXSMPITEDKKDSTTTEHLWTDLLENPHEWWDNRLNKN 800
++ S + E I E+ T + W L+ENP EW D+R NK
Sbjct: 184 TKT-ISPPEKEVTSIKKKPARSKKVKVIDEE------TSNSWKHLIENPKEWLDHRGNKA 236
Query: 799 N--LKGA--DFNHKVKGEKLWLDESTPGWVVSKLESLNFINKTVQKSQKSVNGVKDRESV 632
N +K DF KV G LWL + P W + KLE L F + V K +N +K
Sbjct: 237 NGLVKPGHPDFKMKVGGLSLWL-STAPDWALLKLEELKF-DVLVPKGNIKLNQLKG---- 290
Query: 631 ESSWRDLIYNPNRWRDHRKEKLNGQVNPKFPDFKHKDGGQALWISSAPKWVLSNLDALKF 452
E SW+DL+ NP++W D+R +K N K+PDFKHK+ G+ALW++++P WVLS L LK
Sbjct: 291 EESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKK 346
Query: 451 DD---------------------------KENSWKDLVENPNKWWDNRFDKLNQRAPDFK 353
+ +E WK+LVENP+KWWDNR DK N + PDFK
Sbjct: 347 NQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFK 406
Query: 352 HKETGEGLWLGGSPDWVMPKLPPVK 278
HKETGE LW+G SP W + KLPP+K
Sbjct: 407 HKETGEALWIGDSPTWALSKLPPLK 431
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 286 bits (731), Expect = 2e-74
Identities = 162/385 (42%), Positives = 219/385 (56%), Gaps = 31/385 (8%)
Frame = -3
Query: 1339 ERNWPRPSEIPWQGKVANVVNLIGRVSMPVQFQVSADGKSWAGTILTQESSSSDGLLWIP 1160
E+ P I ++ +++N +NLIG V PVQF +DGK WAGT+++Q S S WIP
Sbjct: 65 EKESTPPKTIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIP 124
Query: 1159 IIFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESTQR 980
IIFEGDLA IA H+K++D +HVSG+L D P + S+ S++QVMV +NFV+ +T
Sbjct: 125 IIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQ-SNVQVMVQNLNFVQAATST 183
Query: 979 KESHASYKQNEQAXXXXXXXXXXXSMPITEDKKDSTTTEHLWTDLLENPHEWWDNRLNKN 800
++ S + E I E+ T + W L+ENP EW D+R NK
Sbjct: 184 TKT-ISPPEKEVTSIKKKPARSKKVKVIDEE------TSNSWKHLIENPKEWLDHRGNKA 236
Query: 799 N--LKGA--DFNHKVKGEKLWLDESTPGWVVSKLESLNFINKTVQKSQKSVNGVKDRESV 632
N +K DF KV G LWL + P W + KLE L F + V K +N +K
Sbjct: 237 NGLVKPGHPDFKMKVGGLSLWL-STAPDWALLKLEELKF-DVLVPKGNIKLNQLKG---- 290
Query: 631 ESSWRDLIYNPNRWRDHRKEKLNGQVNPKFPDFKHKDGGQALWISSAPKWVLSNLDALKF 452
E SW+DL+ NP++W D+R +K N K+PDFKHK+ G+ALW++++P WVLS L LK
Sbjct: 291 EESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKK 346
Query: 451 DD---------------------------KENSWKDLVENPNKWWDNRFDKLNQRAPDFK 353
+ +E WK+LVENP+KWWDNR DK N + PDFK
Sbjct: 347 NQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFK 406
Query: 352 HKETGEGLWLGGSPDWVMPKLPPVK 278
HKETGE LW+G SP W + KLPP+K
Sbjct: 407 HKETGEALWIGDSPTWALSKLPPLK 431
>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 281 bits (719), Expect = 4e-73
Identities = 164/394 (41%), Positives = 222/394 (56%), Gaps = 32/394 (8%)
Frame = -3
Query: 1363 KKVVEEERERNWPRPSEIPWQGKVANVVNLIGRVSMPVQFQVSADGKSWAGTILTQESSS 1184
K V E+ P I ++ +++N +NLIG V PVQF +DGK WAGT+++Q S S
Sbjct: 57 KPPVNAAAEKESTPPKRIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGS 116
Query: 1183 SDGLLWIPIIFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGIN 1004
WIPIIFEGDLA IA H+K++D +HVSG+L D P + S+ S++QVMV +N
Sbjct: 117 KSSNFWIPIIFEGDLAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQ-SNVQVMVQNLN 175
Query: 1003 FVEESTQRKESHASYKQNEQAXXXXXXXXXXXSMPITEDKKDSTTTEHLWTDLLENPHEW 824
FV+ +T ++ S + E I E+ T + W L+ENP EW
Sbjct: 176 FVQAATSLTKT-ISPPEKEVISTKKRPVRSKKVKVIDEE------TSNSWKHLIENPKEW 228
Query: 823 WDNRLNKNN--LKGA--DFNHKVKGEKLWLDESTPGWVVSKLESLNFINKTVQKSQKSVN 656
D+R NK N +K DF KV G LWL + P W + KL+ L F + V K +N
Sbjct: 229 LDHRGNKANGLVKPGHPDFKMKVGGLSLWL-STAPDWALPKLKELEF-DVLVPKGNIKLN 286
Query: 655 GVKDRESVESSWRDLIYNPNRWRDHRKEKLNGQVNPKFPDFKHKDGGQALWISSAPKWVL 476
+K E SW+DL+ NP++W D+R +K N K+PDFKHK+ G+ALW++++P WVL
Sbjct: 287 QLKG----EESWKDLVQNPDKWLDNRLDK----TNVKYPDFKHKETGEALWMTNSPIWVL 338
Query: 475 SNLDALKFDD---------------------------KENSWKDLVENPNKWWDNRFDKL 377
S L LK + +E SWK+LVENP+KWWDNR DK
Sbjct: 339 SKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKR 398
Query: 376 NQRAPDFKHKETGEGLWL-GGSPDWVMPKLPPVK 278
N +APDFKHKETGE LW+ SP W + KLPP+K
Sbjct: 399 NPKAPDFKHKETGEVLWINNNSPTWALSKLPPLK 432
>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
Protein OSB3 [Medicago truncatula]
Length = 491
Score = 247 bits (630), Expect = 8e-63
Identities = 145/377 (38%), Positives = 192/377 (50%), Gaps = 20/377 (5%)
Frame = -3
Query: 1324 RPSEIPWQGKVANVVNLIGRVSMPVQFQVSADGKSWAGTILTQESSSSDGLLWIPIIFEG 1145
+P+EIP+Q K+AN VNLIG V+ P+ FQ S DG A T++T+ L IP++F G
Sbjct: 67 KPTEIPFQPKLANSVNLIGTVNKPIHFQTSTDGNPSAATVITRLGHDPSQFL-IPLVFHG 125
Query: 1144 DLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESTQ-RKESH 968
DLA A HLK D VHV GQL+ + Q ++K + QV V +NFVE + +K S
Sbjct: 126 DLALTAQFHLKLNDVVHVEGQLSTEDDQIKLDKPQQYQFQVKVQSLNFVEGYPRVKKASL 185
Query: 967 ASYKQNEQAXXXXXXXXXXXSMPITEDKKDSTTTEHLWTDLLENPHEWWDNRLNKNNLKG 788
S ++++ I +K + T W D++ P +W K + K
Sbjct: 186 TSKEKSDIEDESENDEIKSSEKDIHSEKTEQHDTRKSWRDVINKPSQWKAVHSPKESPKN 245
Query: 787 ADFNHKVKGEKLWLDESTPGWVVSKLESLNFINKTVQKSQKSVNGVKDRESVESSWRDLI 608
ADF K +GE PG Q + + K S+ S+W DL+
Sbjct: 246 ADFESKTEGEL------QPGL-----------------KQSTTSAKKYTGSLSSTWGDLL 282
Query: 607 YNPNRWRDHRKEKLNGQVNPKFPDFKHKDGGQALWISSAPKWVLSNLDALKFDDK----- 443
+P +W D R K NG VNPK+PDFK KDG ++W+ A K VLS L L+FD
Sbjct: 283 DDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKSVLSRLKELEFDTPPVKPK 342
Query: 442 -------ENSWKDLVENPNKWWDNRFDKLNQRAPDFKHKETGEGLWLGGSPDWVMPKL-- 290
+ SW DL++NP KWWDNR DK RAPDFKHK+TG GLWL SP WV +L
Sbjct: 343 QTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRDSPSWVSSRLKE 402
Query: 289 -----PPVKSKDVAGSK 254
VKSK SK
Sbjct: 403 LEVESTSVKSKQAKDSK 419