BLASTX nr result

ID: Coptis21_contig00011187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011187
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518920.1| hypothetical protein RCOM_1313640 [Ricinus c...   139   4e-31
ref|XP_002297942.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002272570.1| PREDICTED: uncharacterized protein LOC100253...   132   5e-29
gb|AFK13153.1| branchless trichomes [Gossypium arboreum]              107   2e-21
emb|CBI34596.3| unnamed protein product [Vitis vinifera]              106   3e-21

>ref|XP_002518920.1| hypothetical protein RCOM_1313640 [Ricinus communis]
           gi|223541907|gb|EEF43453.1| hypothetical protein
           RCOM_1313640 [Ricinus communis]
          Length = 357

 Score =  139 bits (350), Expect = 4e-31
 Identities = 71/130 (54%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
 Frame = +2

Query: 215 SWKLYENXXXXXXXXXXXXXXXXXXLN-YLTPSARKLAACLWDLTFIRSIMDSELDIARA 391
           +WKLYEN                   N +L  SARK+AA  WDLTF+R IM++ELD ARA
Sbjct: 33  TWKLYENPFYNSHNTKQHQHLQHSQTNKHLPLSARKIAASFWDLTFLRPIMETELDFARA 92

Query: 392 KIHELKAELEFERKARKKAETVNKKLCKQLSEDRKRRQAVEDVCEKLAKEIASERVEMDR 571
           +I ELKAELE+ERKARKK ET+NK+L K+L+E+R+ R+A+E VCE+LAKEI+ ++ E+DR
Sbjct: 93  QIIELKAELEYERKARKKGETMNKRLAKELAEERRGREALERVCEQLAKEISFDKAEIDR 152

Query: 572 MKKDMVEERK 601
           MK+++ EER+
Sbjct: 153 MKREIEEERR 162


>ref|XP_002297942.1| predicted protein [Populus trichocarpa] gi|222845200|gb|EEE82747.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  134 bits (336), Expect = 2e-29
 Identities = 70/134 (52%), Positives = 95/134 (70%), Gaps = 4/134 (2%)
 Frame = +2

Query: 212 SSWKLYENXXXXXXXXXXXXXXXXXX----LNYLTPSARKLAACLWDLTFIRSIMDSELD 379
           +SWKLYEN                      L++L  SARK+AA  WDLTF R IMD+ELD
Sbjct: 31  TSWKLYENPFYNSQHNIQHQHQQHCQSNKHLHHLPLSARKIAASFWDLTFFRPIMDTELD 90

Query: 380 IARAKIHELKAELEFERKARKKAETVNKKLCKQLSEDRKRRQAVEDVCEKLAKEIASERV 559
            ARA+I +LKAELE+ERKARKK ET++K+L K+L+E+R+ R+A+  VCE+LA+EI+ ++ 
Sbjct: 91  FARAQILDLKAELEYERKARKKLETMSKRLAKELAEERRGREALARVCEELAREISCDKE 150

Query: 560 EMDRMKKDMVEERK 601
           E+D MK++M EERK
Sbjct: 151 EIDHMKREMEEERK 164


>ref|XP_002272570.1| PREDICTED: uncharacterized protein LOC100253094 [Vitis vinifera]
          Length = 342

 Score =  132 bits (332), Expect = 5e-29
 Identities = 66/98 (67%), Positives = 83/98 (84%)
 Frame = +2

Query: 308 SARKLAACLWDLTFIRSIMDSELDIARAKIHELKAELEFERKARKKAETVNKKLCKQLSE 487
           SARK+AA  WDLTF R IMDSELDIARA+I ELKAELEFERKARKK E++NK+L K L+E
Sbjct: 84  SARKIAASFWDLTFFRPIMDSELDIARAQIIELKAELEFERKARKKVESMNKRLAKDLNE 143

Query: 488 DRKRRQAVEDVCEKLAKEIASERVEMDRMKKDMVEERK 601
           +R+ R+A+E VCE LAKEI+S++ E+  MK+++ EERK
Sbjct: 144 ERRGREAMERVCEVLAKEISSDKAEISWMKREIEEERK 181


>gb|AFK13153.1| branchless trichomes [Gossypium arboreum]
          Length = 232

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/81 (62%), Positives = 71/81 (87%)
 Frame = +2

Query: 359 IMDSELDIARAKIHELKAELEFERKARKKAETVNKKLCKQLSEDRKRRQAVEDVCEKLAK 538
           +MDSEL IARA+I +LKAE+E+ERKARKK E++NKKL K+++E+R+ ++A+E VCEKLA+
Sbjct: 46  VMDSELGIARAQIIDLKAEVEYERKARKKVESLNKKLGKEVAEERRGKEALESVCEKLAR 105

Query: 539 EIASERVEMDRMKKDMVEERK 601
           EI S++ EMDRMK++  EERK
Sbjct: 106 EITSKKSEMDRMKREFEEERK 126


>emb|CBI34596.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/80 (66%), Positives = 69/80 (86%)
 Frame = +2

Query: 362 MDSELDIARAKIHELKAELEFERKARKKAETVNKKLCKQLSEDRKRRQAVEDVCEKLAKE 541
           MDSELDIARA+I ELKAELEFERKARKK E++NK+L K L+E+R+ R+A+E VCE LAKE
Sbjct: 1   MDSELDIARAQIIELKAELEFERKARKKVESMNKRLAKDLNEERRGREAMERVCEVLAKE 60

Query: 542 IASERVEMDRMKKDMVEERK 601
           I+S++ E+  MK+++ EERK
Sbjct: 61  ISSDKAEISWMKREIEEERK 80


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