BLASTX nr result

ID: Coptis21_contig00011186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011186
         (2298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267...   449   e-123
ref|XP_003611747.1| Splicing factor, arginine/serine-rich [Medic...   426   e-116
ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213...   422   e-115
ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putat...   420   e-114
ref|XP_003611746.1| Splicing factor, arginine/serine-rich [Medic...   412   e-112

>ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267903 [Vitis vinifera]
            gi|296082422|emb|CBI21427.3| unnamed protein product
            [Vitis vinifera]
          Length = 552

 Score =  449 bits (1154), Expect = e-123
 Identities = 235/375 (62%), Positives = 254/375 (67%)
 Frame = +2

Query: 35   MWHEARRSEKKVHDLMDAARKRAQRRAVFLAKRRGDPQQSLMPVGTRCRMYRDDGIYQAT 214
            MWHEARRSE+KVHDLMDAARKRAQRRAVFLAKRRGDPQQS+  VG+R R YRDDG+YQAT
Sbjct: 1    MWHEARRSERKVHDLMDAARKRAQRRAVFLAKRRGDPQQSIQVVGSRSRTYRDDGLYQAT 60

Query: 215  QDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSSRNFRVQSKTXXXXXXXXFVNFERYRD 394
             DQQGLIPWNGKQ+ILIDRFDGRALLDFIRDS SR+FR Q KT        FVNFERYRD
Sbjct: 61   LDQQGLIPWNGKQNILIDRFDGRALLDFIRDSDSRHFRAQQKTEEEEELEEFVNFERYRD 120

Query: 395  LIKHRRRGFMDEEGLQHASLEIEAKITAPFAFNRAQPTQPPVSKGSYSQVGFSYDGDGKE 574
            LIKHRRRGF DEEGLQH + E+EAK  APF  +R+Q  QPP SKGSYSQVGFSYDGDGKE
Sbjct: 121  LIKHRRRGFTDEEGLQHVNEEMEAKTVAPFTSDRSQLPQPPASKGSYSQVGFSYDGDGKE 180

Query: 575  EAHLVXXXXXXXXXXXXXXXXXXXXXXXXXAMDKIAKEFGVKRYSWLVYMDXXXXXXXXX 754
            E H                            MD IAKEFGVKRY WLVYMD         
Sbjct: 181  ETHFSDGDNDDDDEDDEDDEDFNSDDSNDEGMDTIAKEFGVKRYGWLVYMDKKAKEEEKR 240

Query: 755  XXXXXXGDPAIKKLSRKERRKASQIERDRDRETARVTGTRILRQDPYRESRRSPSYEAYF 934
                  GDPAI+KLSRKERRKASQIER+R+RE  RVTGTR+L+ DPYRE RRSP+Y+AY 
Sbjct: 241  QKEVIKGDPAIRKLSRKERRKASQIEREREREATRVTGTRMLQHDPYREPRRSPTYDAY- 299

Query: 935  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKIEYITEFGGSADVNDQKLAGV 1114
                                                 PKIEYITEFGGSAD +D K  G 
Sbjct: 300  -PRSRRSRSRSRSYSPSYSRRYARGGHDDVHRSKSKTPKIEYITEFGGSADGDDPKFEGF 358

Query: 1115 SPPPSPPTQADVLNR 1159
            SPPPSPP+ AD LNR
Sbjct: 359  SPPPSPPSHADALNR 373



 Score =  136 bits (342), Expect = 3e-29
 Identities = 79/111 (71%), Positives = 85/111 (76%)
 Frame = +3

Query: 1449 LYRPSTGRILEALHNDPASAVSLDQEKNSKLLKPSVSGSTSSGLAKLSKPTAIVGSSKPQ 1628
            L RPS+GRILEALH DPAS +SLD+EK SK+LKPSVS  TSS L+KLSKPT I G  K Q
Sbjct: 371  LNRPSSGRILEALHVDPASGISLDKEKQSKVLKPSVS--TSSALSKLSKPTTIGGPLK-Q 427

Query: 1629 QGEKKETPQERLKRIMSKQLNKQIKKDTAVEMAXXXXXXXXXXXXLAEMSK 1781
            QGEKKE PQERLKRIMSKQLNKQIKKDTAVEMA            LAE S+
Sbjct: 428  QGEKKERPQERLKRIMSKQLNKQIKKDTAVEMAKKREQERQRLEKLAETSR 478


>ref|XP_003611747.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
            gi|355513082|gb|AES94705.1| Splicing factor,
            arginine/serine-rich [Medicago truncatula]
          Length = 382

 Score =  426 bits (1094), Expect = e-116
 Identities = 224/386 (58%), Positives = 257/386 (66%)
 Frame = +2

Query: 35   MWHEARRSEKKVHDLMDAARKRAQRRAVFLAKRRGDPQQSLMPVGTRCRMYRDDGIYQAT 214
            MWHEARRSEKKVHD+MDAARKRAQRRAV+LAKRRGDP QS+  VG+R R YRDD +YQAT
Sbjct: 1    MWHEARRSEKKVHDMMDAARKRAQRRAVYLAKRRGDPMQSIQVVGSRSRAYRDDALYQAT 60

Query: 215  QDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSSRNFRVQSKTXXXXXXXXFVNFERYRD 394
            +DQQGLIPWNGKQDILIDRFDGRALLDFIRDSS R  RVQ K+        FVNFERYRD
Sbjct: 61   EDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSFR--RVQEKSEEEEELEEFVNFERYRD 118

Query: 395  LIKHRRRGFMDEEGLQHASLEIEAKITAPFAFNRAQPTQPPVSKGSYSQVGFSYDGDGKE 574
            LIKHRRRGF DE+ LQH +LE+EAK  APFA +R+  +QP  +KGSYSQVGFSYDG+GKE
Sbjct: 119  LIKHRRRGFTDEDALQHVNLEMEAKAAAPFASDRSNVSQPAATKGSYSQVGFSYDGNGKE 178

Query: 575  EAHLVXXXXXXXXXXXXXXXXXXXXXXXXXAMDKIAKEFGVKRYSWLVYMDXXXXXXXXX 754
            E+  +                          M+ IAKE+GVKRY WLVYMD         
Sbjct: 179  ESQ-ISDDDDEEDEDDEDDEDFNSDDSNDEGMEIIAKEYGVKRYGWLVYMDKKAKEEQKR 237

Query: 755  XXXXXXGDPAIKKLSRKERRKASQIERDRDRETARVTGTRILRQDPYRESRRSPSYEAYF 934
                  GDPAI+KLSRKERRKASQ+ER+R+RE  R+ GTR+L  DPYRESR+SP+YEAY 
Sbjct: 238  QKEIIKGDPAIRKLSRKERRKASQVEREREREATRIPGTRVLHHDPYRESRQSPTYEAY- 296

Query: 935  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKIEYITEFGGSADVNDQKLAGV 1114
                                                 PKIEYITEFGGS + +  +  G 
Sbjct: 297  SRSRRSRSRSRSYSPSYARRYSRSSHFDDILRNKSKTPKIEYITEFGGSGEADGTRREGF 356

Query: 1115 SPPPSPPTQADVLNRSEHSTFNSCKD 1192
            SPP SP ++ D LNRSEH TFN C+D
Sbjct: 357  SPPRSPTSRVDTLNRSEHWTFNYCQD 382


>ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213620 [Cucumis sativus]
          Length = 557

 Score =  422 bits (1085), Expect = e-115
 Identities = 218/378 (57%), Positives = 257/378 (67%), Gaps = 3/378 (0%)
 Frame = +2

Query: 35   MWHEARRSEKKVHDLMDAARKRAQRRAVFLAKRRGDPQQSLMPVGTRCRMYRDDGIYQAT 214
            MWHEARRSE+KVHD+MDAARKRAQRRAVFLAKRRGDPQQS+  VGTRCR+YRDDG+YQAT
Sbjct: 1    MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 215  QDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSSRNFRVQSKTXXXXXXXXFVNFERYRD 394
            +DQQGLIPWNGKQD++IDRFDGRALLDFIR+  SR+ R   K+        FVNF+RYRD
Sbjct: 61   EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELEEFVNFQRYRD 120

Query: 395  LIKHRRRGFMDEEGLQHASLEIEAKITAPFAFNRAQPTQPP-VSKGSYSQVGFSYDGDGK 571
            LIKHRRRGF DE+GLQH + E+EAK++APF  +R+Q  QPP  SKGSYSQVGFSY+ DGK
Sbjct: 121  LIKHRRRGFNDEDGLQHVNQEMEAKMSAPFVSDRSQQPQPPSASKGSYSQVGFSYEADGK 180

Query: 572  EEAH--LVXXXXXXXXXXXXXXXXXXXXXXXXXAMDKIAKEFGVKRYSWLVYMDXXXXXX 745
            EE++                              M+ IAKEFGVKRY WLVYMD      
Sbjct: 181  EESNSDADDNASDDEDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEE 240

Query: 746  XXXXXXXXXGDPAIKKLSRKERRKASQIERDRDRETARVTGTRILRQDPYRESRRSPSYE 925
                     GDPAI+KLSRKERRKASQ+ER+R+RE AR+TGTR+L  DPYRESRRSP+Y+
Sbjct: 241  EKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYD 300

Query: 926  AYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKIEYITEFGGSADVNDQKL 1105
            AY                                      PKIE+ITEFGGS +  + +L
Sbjct: 301  AY----PRSRRSRSRSHSPSHSRHHSHGHFDDVHRSKPKTPKIEFITEFGGSGESKEPRL 356

Query: 1106 AGVSPPPSPPTQADVLNR 1159
             G+SPP SPP+Q D++NR
Sbjct: 357  EGLSPPQSPPSQPDMINR 374



 Score =  120 bits (301), Expect = 2e-24
 Identities = 70/112 (62%), Positives = 83/112 (74%)
 Frame = +3

Query: 1446 LLYRPSTGRILEALHNDPASAVSLDQEKNSKLLKPSVSGSTSSGLAKLSKPTAIVGSSKP 1625
            ++ RPS+GRILEALH DPAS V+LD+EK+S+ +KPSVS  TSS LAKL+K ++  G  K 
Sbjct: 371  MINRPSSGRILEALHIDPASGVTLDKEKSSRAVKPSVS--TSSALAKLTKASSSGGPLK- 427

Query: 1626 QQGEKKETPQERLKRIMSKQLNKQIKKDTAVEMAXXXXXXXXXXXXLAEMSK 1781
              GEKKETPQERLKRIMS+QLNKQIKKDTA EMA            LAE S+
Sbjct: 428  -LGEKKETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSR 478


>ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
            gi|223537146|gb|EEF38779.1| Splicing factor,
            arginine/serine-rich, putative [Ricinus communis]
          Length = 553

 Score =  420 bits (1079), Expect = e-114
 Identities = 225/378 (59%), Positives = 253/378 (66%), Gaps = 3/378 (0%)
 Frame = +2

Query: 35   MWHEARRSEKKVHDLMDAARKRAQRRAVFLAKRRGDPQQSLMPVGTRCRMYRDDGIYQAT 214
            MWHEARRSEKKVHD+MDAARKRAQRRAV+LAKRRGDPQQS+  + +RCR YRDD +YQAT
Sbjct: 1    MWHEARRSEKKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQVISSRCRTYRDDSLYQAT 60

Query: 215  QDQQGLIPWNGKQDILIDRFDGRALLDFIRDSS-SRNFRVQSKTXXXXXXXXFVNFERYR 391
            QDQQGLIPWNGKQD+LIDRFDGRALLDFIR+S+ SR FR   K+        FVNFERYR
Sbjct: 61   QDQQGLIPWNGKQDVLIDRFDGRALLDFIRESTGSRRFRPPQKSEEEEELEEFVNFERYR 120

Query: 392  DLIKHRRRGFMDEEGLQHASLEIEAKITAPFAFNRA-QPTQPPVSKGSYSQVGFSYDGDG 568
            DLIKHRRRGF DEEGLQH + E+EAKIT PF+ + + Q  Q P  KGSYSQVGFSYDGDG
Sbjct: 121  DLIKHRRRGFTDEEGLQHVNQEMEAKITVPFSSDSSTQLAQAPSIKGSYSQVGFSYDGDG 180

Query: 569  KEEAHLV-XXXXXXXXXXXXXXXXXXXXXXXXXAMDKIAKEFGVKRYSWLVYMDXXXXXX 745
            K+E+ +                            MD IAKEFGVKRY WLVYMD      
Sbjct: 181  KDESQVSDGDDNEEEDEDDDEEEDFNSDDSNDEGMDMIAKEFGVKRYGWLVYMDKKAKEE 240

Query: 746  XXXXXXXXXGDPAIKKLSRKERRKASQIERDRDRETARVTGTRILRQDPYRESRRSPSYE 925
                     GDPAI+KLSRKERRKASQIER+R+RE AR+TGTR+L  DPYRE+RRSP+YE
Sbjct: 241  EKRQKEIIKGDPAIRKLSRKERRKASQIEREREREAARITGTRVLHHDPYREARRSPTYE 300

Query: 926  AYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKIEYITEFGGSADVNDQKL 1105
            AY                                      PKIEYITEFG S D +  KL
Sbjct: 301  AY-SRSRRSRSRSRSYSPSHSKRYGRGGHSDEVHRSKSRTPKIEYITEFGSSGDGDKLKL 359

Query: 1106 AGVSPPPSPPTQADVLNR 1159
             G SPPPSPP QAD+L+R
Sbjct: 360  EGYSPPPSPPFQADMLSR 377



 Score =  127 bits (318), Expect = 2e-26
 Identities = 70/112 (62%), Positives = 85/112 (75%)
 Frame = +3

Query: 1446 LLYRPSTGRILEALHNDPASAVSLDQEKNSKLLKPSVSGSTSSGLAKLSKPTAIVGSSKP 1625
            +L RP +GRILEALH DPAS V+LD++K++K++KP+VS  TSS L+KL+K +A  G SK 
Sbjct: 374  MLSRPYSGRILEALHVDPASGVTLDKDKSTKVVKPAVS--TSSALSKLTKASASGGPSKQ 431

Query: 1626 QQGEKKETPQERLKRIMSKQLNKQIKKDTAVEMAXXXXXXXXXXXXLAEMSK 1781
            Q GEKKETPQERLKRIMSKQLNKQIKKDTA EMA            LAE ++
Sbjct: 432  QPGEKKETPQERLKRIMSKQLNKQIKKDTAAEMAKKREQERQRLEKLAETNR 483


>ref|XP_003611746.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
            gi|355513081|gb|AES94704.1| Splicing factor,
            arginine/serine-rich [Medicago truncatula]
          Length = 641

 Score =  412 bits (1058), Expect = e-112
 Identities = 218/377 (57%), Positives = 250/377 (66%)
 Frame = +2

Query: 35   MWHEARRSEKKVHDLMDAARKRAQRRAVFLAKRRGDPQQSLMPVGTRCRMYRDDGIYQAT 214
            MWHEARRSEKKVHD+MDAARKRAQRRAV+LAKRRGDP QS+  VG+R R YRDD +YQAT
Sbjct: 1    MWHEARRSEKKVHDMMDAARKRAQRRAVYLAKRRGDPMQSIQVVGSRSRAYRDDALYQAT 60

Query: 215  QDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSSRNFRVQSKTXXXXXXXXFVNFERYRD 394
            +DQQGLIPWNGKQDILIDRFDGRALLDFIRDSS R  RVQ K+        FVNFERYRD
Sbjct: 61   EDQQGLIPWNGKQDILIDRFDGRALLDFIRDSSFR--RVQEKSEEEEELEEFVNFERYRD 118

Query: 395  LIKHRRRGFMDEEGLQHASLEIEAKITAPFAFNRAQPTQPPVSKGSYSQVGFSYDGDGKE 574
            LIKHRRRGF DE+ LQH +LE+EAK  APFA +R+  +QP  +KGSYSQVGFSYDG+GKE
Sbjct: 119  LIKHRRRGFTDEDALQHVNLEMEAKAAAPFASDRSNVSQPAATKGSYSQVGFSYDGNGKE 178

Query: 575  EAHLVXXXXXXXXXXXXXXXXXXXXXXXXXAMDKIAKEFGVKRYSWLVYMDXXXXXXXXX 754
            E+  +                          M+ IAKE+GVKRY WLVYMD         
Sbjct: 179  ESQ-ISDDDDEEDEDDEDDEDFNSDDSNDEGMEIIAKEYGVKRYGWLVYMDKKAKEEQKR 237

Query: 755  XXXXXXGDPAIKKLSRKERRKASQIERDRDRETARVTGTRILRQDPYRESRRSPSYEAYF 934
                  GDPAI+KLSRKERRKASQ+ER+R+RE  R+ GTR+L  DPYRESR+SP+YEAY 
Sbjct: 238  QKEIIKGDPAIRKLSRKERRKASQVEREREREATRIPGTRVLHHDPYRESRQSPTYEAY- 296

Query: 935  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKIEYITEFGGSADVNDQKLAGV 1114
                                                 PKIEYITEFGGS + +  +  G 
Sbjct: 297  SRSRRSRSRSRSYSPSYARRYSRSSHFDDILRNKSKTPKIEYITEFGGSGEADGTRREGF 356

Query: 1115 SPPPSPPTQADVLNRSE 1165
            SPP SP ++ D LNRSE
Sbjct: 357  SPPRSPTSRVDTLNRSE 373



 Score =  108 bits (269), Expect = 8e-21
 Identities = 65/107 (60%), Positives = 73/107 (68%)
 Frame = +3

Query: 1461 STGRILEALHNDPASAVSLDQEKNSKLLKPSVSGSTSSGLAKLSKPTAIVGSSKPQQGEK 1640
            S+G ILEALH DPAS VS+D  K +K+LKP VS  + S LAKL K +   G  KPQ GEK
Sbjct: 392  SSGCILEALHVDPASGVSID--KGAKVLKPPVSTPSGSALAKL-KASGSGGILKPQPGEK 448

Query: 1641 KETPQERLKRIMSKQLNKQIKKDTAVEMAXXXXXXXXXXXXLAEMSK 1781
            KETPQERLKRIM+KQLNKQIKKDTA E A            LAE S+
Sbjct: 449  KETPQERLKRIMNKQLNKQIKKDTAAEQAKKREQERQRQEKLAETSR 495


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