BLASTX nr result

ID: Coptis21_contig00011172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011172
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]   130   1e-27
ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852...   127   6e-27
ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852...   127   6e-27
ref|XP_002521082.1| hypothetical protein RCOM_1719530 [Ricinus c...   125   4e-26
ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26

>emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
          Length = 326

 Score =  130 bits (327), Expect = 1e-27
 Identities = 67/97 (69%), Positives = 68/97 (70%)
 Frame = +2

Query: 1238 SLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXGKEGGRGEYVCCVCMVRHKGAA 1417
            SLMALLEETD    GIVG                    G  GG  EY CCVCMVRHKGAA
Sbjct: 235  SLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEE----GDSGGGIEYNCCVCMVRHKGAA 289

Query: 1418 FIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1528
            FIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 290  FIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 326



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 54/123 (43%), Positives = 70/123 (56%)
 Frame = +2

Query: 332 LESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLEIIK 511
           ++ + LRD LR R+   + DGRD+ AGLTL AVLGCE       HI     +RTLL+II+
Sbjct: 1   MDPSTLRDRLRTRE---DXDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLDIIR 51

Query: 512 DEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTSSHPVS 691
           DE +G  Y+ ++  P                 SWK FK RLR+RRAGAA+   TSS P+ 
Sbjct: 52  DESTG--YKDVLGQP----------NNNNNKMSWKSFKDRLRIRRAGAAW---TSSMPIP 96

Query: 692 ACD 700
           A D
Sbjct: 97  ASD 99


>ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
            vinifera] gi|359495533|ref|XP_003635013.1| PREDICTED:
            uncharacterized protein LOC100852917 isoform 3 [Vitis
            vinifera]
          Length = 335

 Score =  127 bits (320), Expect = 6e-27
 Identities = 66/97 (68%), Positives = 67/97 (69%)
 Frame = +2

Query: 1238 SLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXGKEGGRGEYVCCVCMVRHKGAA 1417
            SLMALLEETD    GIVG                       GG  EY CCVCMVRHKGAA
Sbjct: 244  SLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEEAG----SGGGIEYNCCVCMVRHKGAA 298

Query: 1418 FIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1528
            FIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 299  FIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 335



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 58/126 (46%), Positives = 74/126 (58%)
 Frame = +2

Query: 323 MSVLESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLE 502
           MSV++ + LRD LR R+   +DDGRD+ AGLTL AVLGCE       HI     +RTLL+
Sbjct: 7   MSVMDPSTLRDRLRTRE---DDDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLD 57

Query: 503 IIKDEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTSSH 682
           II+DE +G  Y+ ++  P                 SWK FK RLR+RRAGAA+   TSS 
Sbjct: 58  IIRDESTG--YKDVLGQP----------NNNNNKMSWKSFKDRLRIRRAGAAW---TSSM 102

Query: 683 PVSACD 700
           P+ A D
Sbjct: 103 PIPASD 108


>ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
            vinifera]
          Length = 329

 Score =  127 bits (320), Expect = 6e-27
 Identities = 66/97 (68%), Positives = 67/97 (69%)
 Frame = +2

Query: 1238 SLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXGKEGGRGEYVCCVCMVRHKGAA 1417
            SLMALLEETD    GIVG                       GG  EY CCVCMVRHKGAA
Sbjct: 238  SLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEEAG----SGGGIEYNCCVCMVRHKGAA 292

Query: 1418 FIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1528
            FIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 293  FIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 329



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 58/126 (46%), Positives = 74/126 (58%)
 Frame = +2

Query: 323 MSVLESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLE 502
           MSV++ + LRD LR R+   +DDGRD+ AGLTL AVLGCE       HI     +RTLL+
Sbjct: 1   MSVMDPSTLRDRLRTRE---DDDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLD 51

Query: 503 IIKDEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTSSH 682
           II+DE +G  Y+ ++  P                 SWK FK RLR+RRAGAA+   TSS 
Sbjct: 52  IIRDESTG--YKDVLGQP----------NNNNNKMSWKSFKDRLRIRRAGAAW---TSSM 96

Query: 683 PVSACD 700
           P+ A D
Sbjct: 97  PIPASD 102


>ref|XP_002521082.1| hypothetical protein RCOM_1719530 [Ricinus communis]
            gi|223539651|gb|EEF41233.1| hypothetical protein
            RCOM_1719530 [Ricinus communis]
          Length = 370

 Score =  125 bits (313), Expect = 4e-26
 Identities = 65/100 (65%), Positives = 69/100 (69%), Gaps = 3/100 (3%)
 Frame = +2

Query: 1238 SLMALLEETDWSTGGIVGT--TXXXXXXXXXXXXXXXXXXGKEGGRG-EYVCCVCMVRHK 1408
            SLM LLEETD   G  VG+  T                  G +GG G E+ CCVCMVRHK
Sbjct: 272  SLMDLLEETDRQMG-FVGSRYTIGDDDEECEEEQEDEDDNGVDGGDGIEHTCCVCMVRHK 330

Query: 1409 GAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1528
            GAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI+EILDIF
Sbjct: 331  GAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIVEILDIF 370


>ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|222843517|gb|EEE81064.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  124 bits (312), Expect = 5e-26
 Identities = 66/103 (64%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
 Frame = +2

Query: 1238 SLMALLEETDWSTG--GIVGTTXXXXXXXXXXXXXXXXXXGKEGGRG----EYVCCVCMV 1399
            SLM LLEETD   G  G   T                   G E G G    EY CCVCMV
Sbjct: 294  SLMDLLEETDRQMGFEGSRYTVGDLEACDDDDDEDEEEEDGGEEGDGVAGIEYTCCVCMV 353

Query: 1400 RHKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1528
            RHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFILEILDIF
Sbjct: 354  RHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 396


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