BLASTX nr result
ID: Coptis21_contig00011171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011171
(668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat... 349 3e-94
emb|CBI30291.3| unnamed protein product [Vitis vinifera] 349 3e-94
ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containi... 346 3e-93
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera] 343 1e-92
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi... 305 7e-81
>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 349 bits (895), Expect = 3e-94
Identities = 164/222 (73%), Positives = 189/222 (85%)
Frame = +1
Query: 1 DPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNGITFVNILRGCSHNGLVEEGLE 180
DPT IAWNSLV VF QHGLG+DA++IFE+M +GVKPN ITF+++L GCSH GLVEEGL+
Sbjct: 372 DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 431
Query: 181 YFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSYLGACRTY 360
YF SM K YGV P EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+LGACR +
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491
Query: 361 GDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVTKLPGYSW 540
GDKE G+LAAEKL+ LEP+NSG VLLSNIYA+ QWE VRS+R MRDG V KLPGYSW
Sbjct: 492 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 551
Query: 541 VDVGNKTHVFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQ 666
VDVG KTHVFGAED+SHP+ IYEKL+ LLDQI+ AGYVP+
Sbjct: 552 VDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPR 593
>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 349 bits (895), Expect = 3e-94
Identities = 164/222 (73%), Positives = 189/222 (85%)
Frame = +1
Query: 1 DPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNGITFVNILRGCSHNGLVEEGLE 180
DPT IAWNSLV VF QHGLG+DA++IFE+M +GVKPN ITF+++L GCSH GLVEEGL+
Sbjct: 307 DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 366
Query: 181 YFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSYLGACRTY 360
YF SM K YGV P EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+LGACR +
Sbjct: 367 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 426
Query: 361 GDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVTKLPGYSW 540
GDKE G+LAAEKL+ LEP+NSG VLLSNIYA+ QWE VRS+R MRDG V KLPGYSW
Sbjct: 427 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 486
Query: 541 VDVGNKTHVFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQ 666
VDVG KTHVFGAED+SHP+ IYEKL+ LLDQI+ AGYVP+
Sbjct: 487 VDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPR 528
>ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 751
Score = 346 bits (887), Expect = 3e-93
Identities = 154/222 (69%), Positives = 189/222 (85%)
Frame = +1
Query: 1 DPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNGITFVNILRGCSHNGLVEEGLE 180
+P IAWN+LVGVF+QHGLGR+A+ F M +G+KPN +TFVN+L+GCSH G+VE+GL
Sbjct: 442 NPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLN 501
Query: 181 YFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSYLGACRTY 360
YF+SM K+YGV P+ EHYSCVIDLLGRAG+L +AE+FIN MP+EPN FGWCS+LGAC+ +
Sbjct: 502 YFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIH 561
Query: 361 GDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVTKLPGYSW 540
GD ER + AA+KLM LEPENSG HVLLSNIYA QWE V+S+RKM++DG + KLPGYSW
Sbjct: 562 GDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSW 621
Query: 541 VDVGNKTHVFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQ 666
VD+ NKTHVFG ED+SHPQ +EIYEKL+NLLDQI++ GYVPQ
Sbjct: 622 VDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQ 663
>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 343 bits (881), Expect = 1e-92
Identities = 162/221 (73%), Positives = 186/221 (84%)
Frame = +1
Query: 1 DPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNGITFVNILRGCSHNGLVEEGLE 180
DPT IAWNSLV VF QHGLG+DA++ FE+M +GVKPN ITF+++L GCSH GLVEEGL+
Sbjct: 372 DPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 431
Query: 181 YFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSYLGACRTY 360
YF SM K YGV P EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+LGACR +
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491
Query: 361 GDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVTKLPGYSW 540
GDKE G+LAAEKL+ LEP+NSG VLLSNIYA+ QWE VRS+R MRDG V KLPGYSW
Sbjct: 492 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 551
Query: 541 VDVGNKTHVFGAEDYSHPQIREIYEKLENLLDQIRKAGYVP 663
VDVG KTHVFGAED+SH + IYEKL+ LLDQI+ AGYVP
Sbjct: 552 VDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVP 592
>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
[Brachypodium distachyon]
Length = 695
Score = 305 bits (780), Expect = 7e-81
Identities = 135/219 (61%), Positives = 177/219 (80%)
Frame = +1
Query: 7 TGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNGITFVNILRGCSHNGLVEEGLEYF 186
T IAWN+ + V AQHG GR+A+R F++MT G++PN ITFV++L CSH GLV+EGL+YF
Sbjct: 388 TDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYF 447
Query: 187 NSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSYLGACRTYGD 366
SM +G+ P+ EHYSC+ID+ GRAGRLD+AE+FI +MP +PNA+GWCS LGACR G+
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507
Query: 367 KERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVTKLPGYSWVD 546
KE GE+AA+ +M LEP+N+G HV LS IYAS GQWE V+++RK+MRD ++ KLPG+SWVD
Sbjct: 508 KELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVD 567
Query: 547 VGNKTHVFGAEDYSHPQIREIYEKLENLLDQIRKAGYVP 663
KTHVFG+ED+SHPQ +IYEKLE L ++I++ GYVP
Sbjct: 568 SNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVP 606