BLASTX nr result

ID: Coptis21_contig00011166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011166
         (1738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-...   424   e-116
ref|XP_002532683.1| NAC domain-containing protein, putative [Ric...   402   e-109
emb|CBI20351.3| unnamed protein product [Vitis vinifera]              401   e-109
ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trich...   400   e-109
ref|XP_002519008.1| transcription factor, putative [Ricinus comm...   398   e-108

>ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]
          Length = 353

 Score =  424 bits (1091), Expect = e-116
 Identities = 217/354 (61%), Positives = 261/354 (73%), Gaps = 8/354 (2%)
 Frame = -2

Query: 1572 MESIDXXXXXXXXXXXXGYRFHPTDEELVVHYLKKKIASVPLPVSIIAEVDLYKFDPWEL 1393
            MES D            G+RFHPTDEELVVHYLKKK +S PLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 1392 PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 1213
            P KA+FG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 1212 VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPP----GTKNNSSRLDDWVLCRIYRKNNSQ 1045
            VFY GKPPKGIKTNWIMHEYRL DN    KPP    G K NS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTH 180

Query: 1044 RSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLL-SDSIN 868
            R+L+ DK+ SMD+   P+ TSI   Q + + Q PK  N    LEN ++ FEG++ SD IN
Sbjct: 181  RTLDPDKDDSMDDMLGPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGIN 240

Query: 867  NSNAVSQLGSASSKPD-VSMV--QNASTLPLKRTLPSHYWNEAAAGSEASQADKRFQGNL 697
            +S  +SQL  +SSKPD +S+V    +S LPLKRTLPS YWN+      ++   KRFQ   
Sbjct: 241  SSGTISQLACSSSKPDHLSLVAATTSSILPLKRTLPSLYWNDDDTAGPST--TKRFQAEN 298

Query: 696  NNSSVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 535
             + ++  T + +NS+A LL+Q+PQ  S  H Q +LGS+ +GV+R  FQ+ G+NW
Sbjct: 299  TDGNIGRTTDGNNSIATLLSQLPQTPS-LHQQSMLGSLGEGVFRQPFQLPGMNW 351


>ref|XP_002532683.1| NAC domain-containing protein, putative [Ricinus communis]
            gi|223527580|gb|EEF29696.1| NAC domain-containing
            protein, putative [Ricinus communis]
          Length = 346

 Score =  402 bits (1032), Expect = e-109
 Identities = 206/353 (58%), Positives = 253/353 (71%), Gaps = 7/353 (1%)
 Frame = -2

Query: 1572 MESIDXXXXXXXXXXXXGYRFHPTDEELVVHYLKKKIASVPLPVSIIAEVDLYKFDPWEL 1393
            MES D            G+RFHPTDEELVVHYLKKK +S PLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 1392 PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 1213
            P KATFG+QEWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 1212 VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPPG----TKNNSSRLDDWVLCRIYRKNNSQ 1045
            VFY GKPPKGIKTNWIMHEYRL DN    KPPG     K NS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVSNKPPGCDLANKKNSLRLDDWVLCRIYKKNNTN 180

Query: 1044 RSLECDKEVSMDNGHTPLVTSI-IGRQHNFEPQVPKSTNCGMFLENNETFFEGLLSDSIN 868
            R ++ +K+ SM++    +  S+ IG Q N   Q+ K TN G  +EN+ +FF      SI+
Sbjct: 181  RPMDQEKDDSMEDMLGSIPPSLTIGSQQNARLQLLKGTNYGTLVENDTSFFN---DHSIS 237

Query: 867  NSNAVSQLGSAS-SKP-DVSMVQNASTLPLKRTLPSHYWNEAAAGSEASQADKRFQGNLN 694
            N+N++SQL S++ S+P D+SM      LPLKRTLPS YW++    + +  + KR+QG+  
Sbjct: 238  NTNSISQLASSTCSRPGDLSM------LPLKRTLPSLYWSDDVDMAASPSSSKRYQGDHT 291

Query: 693  NSSVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 535
                   ++ + S  +LL+Q+PQ       Q  LGSI DG++RP +Q+SG+NW
Sbjct: 292  GDESVVRSDGNGSFVSLLSQLPQTPPLHQQQATLGSIGDGIFRPPYQLSGLNW 344


>emb|CBI20351.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  401 bits (1030), Expect = e-109
 Identities = 206/351 (58%), Positives = 246/351 (70%), Gaps = 5/351 (1%)
 Frame = -2

Query: 1572 MESIDXXXXXXXXXXXXGYRFHPTDEELVVHYLKKKIASVPLPVSIIAEVDLYKFDPWEL 1393
            MES D            G+RFHPTDEELVVHYLKKK +S PLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWEL 60

Query: 1392 PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 1213
            P KA+FG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+LT+GGTQK+GVKKAL
Sbjct: 61   PAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKAL 120

Query: 1212 VFYSGKPPKGIKTNWIMHEYRLTDNSGVMKPP----GTKNNSSRLDDWVLCRIYRKNNSQ 1045
            VFY GKPPKGIKTNWIMHEYRL DN    KPP    G K NS RLDDWVLCRIY+KNN+ 
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTH 180

Query: 1044 RSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLL-SDSIN 868
            R+L+ DK+ SMD+   P+ TSI   Q + + Q PK  N    LEN ++ FEG++ SD IN
Sbjct: 181  RTLDPDKDDSMDDMLGPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGIN 240

Query: 867  NSNAVSQLGSASSKPDVSMVQNASTLPLKRTLPSHYWNEAAAGSEASQADKRFQGNLNNS 688
             +                    +S LPLKRTLPS YWN+      ++   KRFQ    + 
Sbjct: 241  TT-------------------TSSILPLKRTLPSLYWNDDDTAGPST--TKRFQAENTDG 279

Query: 687  SVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 535
            ++  T + +NS+A LL+Q+PQ  S  H Q +LGS+ +GV+R  FQ+ G+NW
Sbjct: 280  NIGRTTDGNNSIATLLSQLPQTPS-LHQQSMLGSLGEGVFRQPFQLPGMNW 329


>ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222859984|gb|EEE97531.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 355

 Score =  400 bits (1027), Expect = e-109
 Identities = 200/336 (59%), Positives = 244/336 (72%), Gaps = 8/336 (2%)
 Frame = -2

Query: 1518 YRFHPTDEELVVHYLKKKIASVPLPVSIIAEVDLYKFDPWELPGKATFGDQEWYFFSPRD 1339
            +RFHPTDEELVVHYLKKK  S PLP++IIAEVDLYKFDPWELP KATFG+QEWYFFSPRD
Sbjct: 27   FRFHPTDEELVVHYLKKKTTSAPLPMAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRD 86

Query: 1338 RKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKALVFYSGKPPKGIKTNWIMH 1159
            RKYPNG RPNRAATSGYWKATGTDKPILT GGTQK+GVKKALVFY GKPPKGIKTNWIMH
Sbjct: 87   RKYPNGTRPNRAATSGYWKATGTDKPILTLGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 146

Query: 1158 EYRLTDNSGVMKPP----GTKNNSSRLDDWVLCRIYRKNNSQRSLECDKEVSMDN--GHT 997
            EYRL DN    KPP    G K NS RLDDWVLCRIY+KNN+ R ++ DK+  MD+  G  
Sbjct: 147  EYRLADNKVKNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRPIDHDKDDYMDDILGSI 206

Query: 996  PLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLLS--DSINNSNAVSQLGSASSKP 823
            P  + ++G   N    + K TN    L+N+   FEG++S  D I +S+++S + S+ SKP
Sbjct: 207  P-PSILVGNHQNGTLHLAKGTNYETLLDNDHNLFEGIISSNDGIRSSSSMSHVASSVSKP 265

Query: 822  DVSMVQNASTLPLKRTLPSHYWNEAAAGSEASQADKRFQGNLNNSSVTGTNNQSNSVANL 643
            D     +   LPLKRTLPS YW +      +S   KRFQG++N       N+ ++S+  L
Sbjct: 266  D-----HLPMLPLKRTLPSLYWTDEDMAVPSS--SKRFQGDINGDESVVGNDGNSSIVTL 318

Query: 642  LNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINW 535
            L+Q+P Q S  H Q +LGS+ +G++RP +Q+ G+NW
Sbjct: 319  LSQLP-QTSQLHQQTMLGSMGNGIFRPPYQIPGMNW 353


>ref|XP_002519008.1| transcription factor, putative [Ricinus communis]
            gi|223541671|gb|EEF43219.1| transcription factor,
            putative [Ricinus communis]
          Length = 355

 Score =  398 bits (1022), Expect = e-108
 Identities = 212/360 (58%), Positives = 253/360 (70%), Gaps = 12/360 (3%)
 Frame = -2

Query: 1572 MESIDXXXXXXXXXXXXGYRFHPTDEELVVHYLKKKIASVPLPVSIIAEVDLYKFDPWEL 1393
            MES D            G+RFHPTDEELVVHYLKKK AS PLPV+IIAEVDLYKFDPWEL
Sbjct: 1    MESTDSSSGSQHPHLPPGFRFHPTDEELVVHYLKKKAASAPLPVTIIAEVDLYKFDPWEL 60

Query: 1392 PGKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTAGGTQKIGVKKAL 1213
            P KATFG+QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL + G QK+GVKKAL
Sbjct: 61   PSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASNGAQKVGVKKAL 120

Query: 1212 VFYSGKPPKGIKTNWIMHEYRLTD-NSGVMKPPG----TKNNSSRLDDWVLCRIYRKNNS 1048
            VFY GKPPKGIKTNWIMHEYRL D N+   KPPG     K  S RLDDWVLCRIY+KNNS
Sbjct: 121  VFYGGKPPKGIKTNWIMHEYRLVDNNNSSSKPPGFDLANKKGSLRLDDWVLCRIYKKNNS 180

Query: 1047 QRSLECDKEVSMDNGHTPLVTSIIGRQHNFEPQVPKSTNCGMFLENNETFFEGLLS--DS 874
            QR+++ DKE SM+     L T  I  +         +   G  L+N E FFEG+L+  D 
Sbjct: 181  QRTMDRDKEDSMEGF---LATLPINPKPASSSVSKPAHAYGSVLDNEENFFEGILTGGDG 237

Query: 873  INNSNAVSQLGSASSKPDVSM--VQNASTLPLKRTLPSHYWN-EAAAGSE--ASQADKRF 709
            + NS+   Q  S+S K  +S+  +  ++ L +KR +PS YWN EA AGS   A+ + KRF
Sbjct: 238  MQNSSVSHQFPSSSPKQHMSIASISTSNPLAIKRVIPSQYWNHEAIAGSSIAAASSGKRF 297

Query: 708  QGNLNNSSVTGTNNQSNSVANLLNQIPQQASPFHHQVLLGSISDGVYRPQFQVSGINWNT 529
             G+LN+ S TGT + + S  +LL+Q+PQ  +PFH    +GS+ DGV R QFQ+  +NWN+
Sbjct: 298  HGDLNSCS-TGTED-NTSFVSLLSQLPQAGAPFHSNTFIGSLGDGVLRQQFQLPSMNWNS 355


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