BLASTX nr result

ID: Coptis21_contig00011164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011164
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273954.1| PREDICTED: UV radiation resistance-associate...   268   7e-70
ref|XP_004139009.1| PREDICTED: UV radiation resistance-associate...   263   2e-68
ref|XP_002518075.1| conserved hypothetical protein [Ricinus comm...   258   9e-67
ref|XP_004162433.1| PREDICTED: LOW QUALITY PROTEIN: UV radiation...   257   2e-66
ref|XP_002323989.1| predicted protein [Populus trichocarpa] gi|2...   239   3e-61

>ref|XP_002273954.1| PREDICTED: UV radiation resistance-associated gene protein [Vitis
           vinifera] gi|298205154|emb|CBI17213.3| unnamed protein
           product [Vitis vinifera]
          Length = 345

 Score =  268 bits (686), Expect = 7e-70
 Identities = 145/229 (63%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
 Frame = -2

Query: 686 SHLKLEEANGLLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGSSGPIHGENFNSA 507
           S  +L++AN LL+GERG+  LK L K LR+R Q+M++QVS LYPVK S G +  E   S 
Sbjct: 117 SRNRLQDANRLLSGERGYVHLKNLEKMLRVRQQHMISQVSFLYPVKPSIGSLEQE-LESF 175

Query: 506 SPNNKLDNSAGSKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQCSATALGYIAHVVLL 327
             +++  N+ GSK ++  SL ISGL+L  L +KKMSFFTDKKE+Q SATALGY+AH V L
Sbjct: 176 PSSSRAGNAVGSKPLNEGSLTISGLQLNMLAIKKMSFFTDKKEVQRSATALGYVAHAVSL 235

Query: 326 IGSYLDAPLRYPLRMGGSRSYINDYA-XXXXXXXXXXSNPILFTNFKATEFPLFLDGQDT 150
           I SYL+ PLRYPLR+GGSRSYINDYA           SN +L TN K  EFPLFL+GQDT
Sbjct: 236 IASYLEVPLRYPLRLGGSRSYINDYAPSIEPTPTDSVSNSLLLTNLKHIEFPLFLEGQDT 295

Query: 149 TRAAYAIFLLNKDLEQLLNFIGAQSLGPRHVLANLKELFRIIQSREFND 3
           TRAAYA+FLLNKDLEQLLNFIG +SLGPRHVLANLKEL R I S EF D
Sbjct: 296 TRAAYAVFLLNKDLEQLLNFIGVKSLGPRHVLANLKELLRTILSPEFID 344


>ref|XP_004139009.1| PREDICTED: UV radiation resistance-associated gene protein-like
           [Cucumis sativus]
          Length = 359

 Score =  263 bits (673), Expect = 2e-68
 Identities = 138/226 (61%), Positives = 167/226 (73%), Gaps = 1/226 (0%)
 Frame = -2

Query: 677 KLEEANGLLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGSSGPIHGENFNSASPN 498
           +L+E+N LL+GE G+ RLK+L K LR R Q+MV+QV+ LYPVK  +GP + +   S    
Sbjct: 133 RLQESNRLLSGEEGYDRLKSLQKMLRRRQQFMVSQVAFLYPVKILTGPANDQELESFPST 192

Query: 497 NKLDNSAGSKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQCSATALGYIAHVVLLIGS 318
           ++L NS+GSK V+  SL I GL L  LP KKMSFF+DKKE Q SA+ALGY+AH V LI S
Sbjct: 193 SRLGNSSGSKPVNHGSLTILGLSLNVLPFKKMSFFSDKKETQRSASALGYVAHAVSLISS 252

Query: 317 YLDAPLRYPLRMGGSRSYINDYAXXXXXXXXXXSNPIL-FTNFKATEFPLFLDGQDTTRA 141
           YL  PLRYPLR+GGSRSY+ DYA           +     TN K  EFPLFLDGQDTTRA
Sbjct: 253 YLKVPLRYPLRLGGSRSYLCDYAPSIEPTSSVTLSTTQPSTNMKHVEFPLFLDGQDTTRA 312

Query: 140 AYAIFLLNKDLEQLLNFIGAQSLGPRHVLANLKELFRIIQSREFND 3
           AYA+FLLNKDLEQLLNFIG +SLGPRH+LANLKE+FR+IQS ++ D
Sbjct: 313 AYAVFLLNKDLEQLLNFIGVKSLGPRHILANLKEIFRVIQSADYID 358


>ref|XP_002518075.1| conserved hypothetical protein [Ricinus communis]
           gi|223542671|gb|EEF44208.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score =  258 bits (659), Expect = 9e-67
 Identities = 139/229 (60%), Positives = 164/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 686 SHLKLEEANGLLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGSSGPIHGENFNSA 507
           S  +L+E+   ++GERG+ RL+ L K LR+R QY ++QVS L+PVK S+GP   +   S 
Sbjct: 127 SSKQLQESKRSVSGERGYGRLRNLQKMLRIRQQYTISQVSLLFPVKISAGPSEEQELESF 186

Query: 506 SPNNKLDNSAGSKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQCSATALGYIAHVVLL 327
              +K  N  GSK V+  SL I GL LT LP  K+SFFTDKKEIQ SATALGY+AH V L
Sbjct: 187 PNTSKSGNYTGSKPVNQGSLTILGLHLTMLPFTKISFFTDKKEIQKSATALGYVAHAVSL 246

Query: 326 IGSYLDAPLRYPLRMGGSRSYINDYA-XXXXXXXXXXSNPILFTNFKATEFPLFLDGQDT 150
           I SYL+ PLRYP+R+GGSRSYINDYA            +    TN K  EFPLFL+GQDT
Sbjct: 247 IASYLEVPLRYPVRLGGSRSYINDYAPSAEPTLPELSLSASSSTNVKPVEFPLFLEGQDT 306

Query: 149 TRAAYAIFLLNKDLEQLLNFIGAQSLGPRHVLANLKELFRIIQSREFND 3
           TRAAYA+FLLNKDLEQLLN+IG +SLGPRHVLANLKEL R IQS EF D
Sbjct: 307 TRAAYAVFLLNKDLEQLLNYIGIKSLGPRHVLANLKELIRTIQSAEFLD 355


>ref|XP_004162433.1| PREDICTED: LOW QUALITY PROTEIN: UV radiation resistance-associated
           gene protein-like [Cucumis sativus]
          Length = 359

 Score =  257 bits (657), Expect = 2e-66
 Identities = 135/226 (59%), Positives = 165/226 (73%), Gaps = 1/226 (0%)
 Frame = -2

Query: 677 KLEEANGLLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGSSGPIHGENFNSASPN 498
           +L+E+N LL+GE G+ RLK+L K LR R Q+MV+QV+ LYPVK  +GP + +   S    
Sbjct: 133 RLQESNRLLSGEEGYDRLKSLQKMLRRRQQFMVSQVAFLYPVKILTGPANDQELESFPST 192

Query: 497 NKLDNSAGSKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQCSATALGYIAHVVLLIGS 318
           ++L NS+GSK V+  SL I GL L  LP  KMSFF+DKKE Q SA+ALGY+AH V LI S
Sbjct: 193 SRLGNSSGSKPVNHGSLTILGLNLNVLPFXKMSFFSDKKETQRSASALGYVAHAVSLISS 252

Query: 317 YLDAPLRYPLRMGGSRSYINDYAXXXXXXXXXXSNPIL-FTNFKATEFPLFLDGQDTTRA 141
           YL  PLRYPLR+GGSRSY+ DYA           +     TN K  E PLFLDGQDTTRA
Sbjct: 253 YLKVPLRYPLRLGGSRSYLCDYAPSIEPTSSVTLSTTQPSTNMKHVEXPLFLDGQDTTRA 312

Query: 140 AYAIFLLNKDLEQLLNFIGAQSLGPRHVLANLKELFRIIQSREFND 3
           AYA+FLLN+DLEQLLNFIG +SLGPRH+LANLKE+FR+IQS ++ D
Sbjct: 313 AYAVFLLNRDLEQLLNFIGVKSLGPRHILANLKEIFRVIQSADYID 358


>ref|XP_002323989.1| predicted protein [Populus trichocarpa] gi|222866991|gb|EEF04122.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  239 bits (611), Expect = 3e-61
 Identities = 132/225 (58%), Positives = 158/225 (70%)
 Frame = -2

Query: 677 KLEEANGLLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGSSGPIHGENFNSASPN 498
           +L+++   LAGERG+ RL  L K LR+R Q+M++QVS LYP+K S+GP   +   S    
Sbjct: 114 QLQDSRRSLAGERGYVRLTKLQKKLRLRQQFMISQVSLLYPIKISAGPSEEQELESFPSR 173

Query: 497 NKLDNSAGSKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQCSATALGYIAHVVLLIGS 318
           N +    GSK V+  SL I GL LT  P  KMSFFTDKKE+Q SA+ALG++AH V LI S
Sbjct: 174 NYV----GSKPVNQGSLTILGLHLTMAPFTKMSFFTDKKEVQRSASALGHVAHAVSLIAS 229

Query: 317 YLDAPLRYPLRMGGSRSYINDYAXXXXXXXXXXSNPILFTNFKATEFPLFLDGQDTTRAA 138
           YL+ PLRY LR+GGS SYI D A           + +L  N K  EFPLFL+GQDTTRAA
Sbjct: 230 YLEVPLRYSLRLGGSNSYIIDCAPSVESSDLLS-STLLTANTKPVEFPLFLEGQDTTRAA 288

Query: 137 YAIFLLNKDLEQLLNFIGAQSLGPRHVLANLKELFRIIQSREFND 3
           YA+FLLNKDLEQLLN+IG +SLGPRHVLANLKEL R IQS EF D
Sbjct: 289 YAVFLLNKDLEQLLNYIGVRSLGPRHVLANLKELTRTIQSAEFLD 333


Top