BLASTX nr result

ID: Coptis21_contig00011158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011158
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254...   402   e-110
ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220...   402   e-110
ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago...   402   e-109
gb|AFK48121.1| unknown [Lotus japonicus]                              399   e-109
ref|NP_001241911.1| uncharacterized protein LOC100818950 [Glycin...   399   e-109

>ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254401 [Vitis vinifera]
          Length = 304

 Score =  402 bits (1034), Expect = e-110
 Identities = 196/286 (68%), Positives = 218/286 (76%), Gaps = 10/286 (3%)
 Frame = +2

Query: 32  GEVQLEAPRIEPNPTDTDPLLENQ-------TSVVDDEDVEAGGSAASCRICLENDGE-- 184
           GEVQLE P  E NP D+DPLLENQ       +S ++ ED+EAG S   CRICLE DGE  
Sbjct: 3   GEVQLE-PSGERNPRDSDPLLENQADSSTGSSSEINSEDIEAG-SVPCCRICLECDGEPD 60

Query: 185 -DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKMKF 361
            +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQ+HL+    EDNSWRK+KF
Sbjct: 61  DELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQYHLQVALFEDNSWRKIKF 120

Query: 362 RVFVARDVILVFLAVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCIXX 541
           R+FVARDV LVFLAVQTVI  +GGFAY+MD++G FRNSFSD WDRILS+HPIPFYYCI  
Sbjct: 121 RLFVARDVFLVFLAVQTVIGAMGGFAYIMDKDGAFRNSFSDGWDRILSRHPIPFYYCIGV 180

Query: 542 XXXXXXXXXXXXXXHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXXXX 721
                         HCSS ++NDP +AGC+NCCYGWG+LDCFPASMEAC           
Sbjct: 181 LAFFVLLGFFGLILHCSSLNSNDPHMAGCQNCCYGWGILDCFPASMEACFALVIVFVVIF 240

Query: 722 XXXXXXYGFLAATMAMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 859
                 YGFLAATMA+QRIWQRHYHILTK ELTKEY+VEDL GCYT
Sbjct: 241 AILGVAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLRGCYT 286


>ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220313 [Cucumis sativus]
           gi|449533550|ref|XP_004173737.1| PREDICTED:
           uncharacterized LOC101220313 [Cucumis sativus]
          Length = 305

 Score =  402 bits (1033), Expect = e-110
 Identities = 196/287 (68%), Positives = 218/287 (75%), Gaps = 11/287 (3%)
 Frame = +2

Query: 32  GEVQLEAPRIEPNPTDTDPLLENQ--------TSVVDDEDVEAGGSAASCRICLENDGE- 184
           GEVQLE+  I  NP+D+DPLLENQ        +  + DED EAG S   CRICLE+D E 
Sbjct: 3   GEVQLESS-IGQNPSDSDPLLENQNGSSSHGTSDEIKDEDTEAG-SIPCCRICLESDAEP 60

Query: 185 --DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKMK 358
             +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHL+    EDNSWRK+K
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 359 FRVFVARDVILVFLAVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCIX 538
           FR+FVARDV+LVF+AVQT+IA IGG+AY+MD++G FRNSFSD WDRILSKHPIPFYYCI 
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 539 XXXXXXXXXXXXXXXHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXXX 718
                          HCSS ++NDP +AGC NCCYGWG+LDCFPASMEAC          
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 719 XXXXXXXYGFLAATMAMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 859
                  YGFLAATMA+QRIWQRHYHILTK ELTKEYVVEDL GCYT
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT 287


>ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula]
           gi|355510294|gb|AES91436.1| E3 ubiquitin-protein ligase
           MARCH3 [Medicago truncatula]
          Length = 312

 Score =  402 bits (1032), Expect = e-109
 Identities = 194/292 (66%), Positives = 218/292 (74%), Gaps = 17/292 (5%)
 Frame = +2

Query: 32  GEVQLEAPRIEPNPTDTDPLLENQTSVVDD--------------EDVEAGGSAASCRICL 169
           GEVQL+ P I+ NP+D+DPLL +Q  V DD              ED+EAG S   CRICL
Sbjct: 3   GEVQLQPPPIQQNPSDSDPLLAHQDEVEDDDSHGSGNSNEIKDQEDIEAG-SLPCCRICL 61

Query: 170 ENDGE---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDN 340
           E+D +   +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDN
Sbjct: 62  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVETYEDN 121

Query: 341 SWRKMKFRVFVARDVILVFLAVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIP 520
           SWRK+KFR+FVARDV LVFLAVQTVIA IGGFAY+MD++G+FRNSF D WDRILS+HPIP
Sbjct: 122 SWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGNFRNSFDDGWDRILSRHPIP 181

Query: 521 FYYCIXXXXXXXXXXXXXXXXHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXX 700
           FYYCI                HCSS ++NDP +AGC+NCCYGWG+LDCFPASMEAC    
Sbjct: 182 FYYCIGVVAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALV 241

Query: 701 XXXXXXXXXXXXXYGFLAATMAMQRIWQRHYHILTKMELTKEYVVEDLGGCY 856
                        YGFLA+TMA+QRIWQRHYHILTK ELTKEY+VEDL G Y
Sbjct: 242 VVFVVIFAILGVAYGFLASTMAIQRIWQRHYHILTKRELTKEYIVEDLQGSY 293


>gb|AFK48121.1| unknown [Lotus japonicus]
          Length = 307

 Score =  399 bits (1025), Expect = e-109
 Identities = 192/288 (66%), Positives = 216/288 (75%), Gaps = 12/288 (4%)
 Frame = +2

Query: 32  GEVQLEAPRIEPNPTDTDPLLENQ---------TSVVDDEDVEAGGSAASCRICLENDGE 184
           GEVQL+ P I  NP+D+DPLL +            + D+EDVEAG S   CRICLE+D +
Sbjct: 3   GEVQLQPPPIMQNPSDSDPLLLDHDEDESPLSSAEIKDEEDVEAG-SLPCCRICLESDSD 61

Query: 185 ---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKM 355
              +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDNSWRK+
Sbjct: 62  PEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDNSWRKI 121

Query: 356 KFRVFVARDVILVFLAVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCI 535
           KFR+FVARDV LVF+AVQTVIA IGGFAY+MD++G FRNSF D WDRILSKHPIPFYYCI
Sbjct: 122 KFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDKDGTFRNSFDDGWDRILSKHPIPFYYCI 181

Query: 536 XXXXXXXXXXXXXXXXHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXX 715
                           HCSS ++NDP +AGC+NCCYGWG+LDCFPAS+EAC         
Sbjct: 182 GVLAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASVEACFALVVVFVV 241

Query: 716 XXXXXXXXYGFLAATMAMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 859
                   YGFLA TMA+QRIWQR YHILTK ELTKEY+VEDLGGCY+
Sbjct: 242 IFAILGIAYGFLATTMAIQRIWQRLYHILTKRELTKEYIVEDLGGCYS 289


>ref|NP_001241911.1| uncharacterized protein LOC100818950 [Glycine max]
           gi|255641889|gb|ACU21213.1| unknown [Glycine max]
          Length = 309

 Score =  399 bits (1025), Expect = e-109
 Identities = 192/289 (66%), Positives = 215/289 (74%), Gaps = 14/289 (4%)
 Frame = +2

Query: 32  GEVQLEAPRIEPNPTDTDPLLENQTSVV-----------DDEDVEAGGSAASCRICLEND 178
           GEVQL+ P +  NP+D+DPLL NQ               ++EDVEAG     CRICLE+D
Sbjct: 3   GEVQLQPPAVMQNPSDSDPLLHNQEEEDGSPGSSGEIKNEEEDVEAG-LLPCCRICLESD 61

Query: 179 GE---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWR 349
            +   +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDNSWR
Sbjct: 62  SDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSWR 121

Query: 350 KMKFRVFVARDVILVFLAVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYY 529
           K+KFR+FVARDV LVFLAVQTVIA IGGF+Y+MD++G FRNSF D WDRILS+HPIPFYY
Sbjct: 122 KIKFRLFVARDVFLVFLAVQTVIAAIGGFSYIMDKDGSFRNSFDDGWDRILSRHPIPFYY 181

Query: 530 CIXXXXXXXXXXXXXXXXHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXX 709
           CI                HCSS ++NDP +AGC+NCCYGW +LDCFPASMEAC       
Sbjct: 182 CIGVLAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWCLLDCFPASMEACFALVVVF 241

Query: 710 XXXXXXXXXXYGFLAATMAMQRIWQRHYHILTKMELTKEYVVEDLGGCY 856
                     YGFLAATMA+QRIWQRHYHILTK ELTKEY+VEDLGGCY
Sbjct: 242 VVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGGCY 290


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