BLASTX nr result

ID: Coptis21_contig00011153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011153
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248...    71   1e-10
emb|CAN66844.1| hypothetical protein VITISV_002365 [Vitis vinifera]    65   6e-09
ref|XP_004167399.1| PREDICTED: uncharacterized protein LOC101225...    63   2e-08
ref|XP_004142022.1| PREDICTED: uncharacterized protein LOC101221...    63   2e-08
ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 s...    61   1e-07

>ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248291 [Vitis vinifera]
          Length = 918

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
 Frame = -3

Query: 458 VDMKSIPIASVVSLNNFSNELSLPIVQPLADCDTVEKKISGEMILGSDCVVSPTSVIAFE 279
           ++++ IP+A+VV+  + S++LSLP+VQPL   D   K +S E+ LGS   VSPTSVIAFE
Sbjct: 34  INVEKIPVATVVAQVSLSDKLSLPVVQPLLAPDPRCKMLSKEIKLGSKSTVSPTSVIAFE 93

Query: 278 EGST-----ECELSGECSSS 234
            GS      EC LSGE +SS
Sbjct: 94  RGSEDDAGHECVLSGELTSS 113


>emb|CAN66844.1| hypothetical protein VITISV_002365 [Vitis vinifera]
          Length = 1056

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = -3

Query: 458 VDMKSIPIASVVSLNNFSNELSLPIVQPLADCDTVEKKISGEMILGSDCVVSPTSVIAFE 279
           ++++ IP+A+VV+  + S++LSLP+VQPL   D   K +S E+ LGS   VSPTSVIAFE
Sbjct: 34  INVEKIPVATVVAQVSLSDKLSLPVVQPLLAPDPRCKMLSKEIKLGSKSTVSPTSVIAFE 93

Query: 278 EGSTECELSGECSSS--PSGHEQCFELSDVVDRSVELGSCNDCNCSG 144
            GS   E  G C S     G E     + V+       + ++C  SG
Sbjct: 94  RGS---EDDGGCVSKELDLGSEATVSPTSVIAYEERAAAGHECVLSG 137


>ref|XP_004167399.1| PREDICTED: uncharacterized protein LOC101225793 [Cucumis sativus]
          Length = 908

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 15/103 (14%)
 Frame = -3

Query: 458 VDMKSIPIASVVSLNNFSNELSLPIVQPLADCDTVEKK-------ISGEMILGSDCVVSP 300
           ++++ IP+A+VV+   F++++SLP+VQP+   D + K        +S E   GS+  VSP
Sbjct: 38  INVERIPVAAVVAEVPFTHKMSLPVVQPILAQDVMSKNTEDSRRCLSKESDSGSERTVSP 97

Query: 299 TSVIAFEE---GSTECELSGECSSS-----PSGHEQCFELSDV 195
           TSVIAFE+   G+  C+LSG+ SSS      +G     ELSDV
Sbjct: 98  TSVIAFEDRVVGNHGCQLSGDLSSSGALEFSNGQIVSGELSDV 140


>ref|XP_004142022.1| PREDICTED: uncharacterized protein LOC101221850 [Cucumis sativus]
          Length = 908

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 15/103 (14%)
 Frame = -3

Query: 458 VDMKSIPIASVVSLNNFSNELSLPIVQPLADCDTVEKK-------ISGEMILGSDCVVSP 300
           ++++ IP+A+VV+   F++++SLP+VQP+   D + K        +S E   GS+  VSP
Sbjct: 38  INVERIPVAAVVAEVPFTHKMSLPVVQPILAQDVMSKNTEDSRRCLSKESDSGSERTVSP 97

Query: 299 TSVIAFEE---GSTECELSGECSSS-----PSGHEQCFELSDV 195
           TSVIAFE+   G+  C+LSG+ SSS      +G     ELSDV
Sbjct: 98  TSVIAFEDRVVGNHGCQLSGDLSSSGALEFSNGQIVSGELSDV 140


>ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula] gi|355513180|gb|AES94803.1| Guanine
           nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula]
          Length = 908

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
 Frame = -3

Query: 458 VDMKSIPIASVVSLNNFSNELSLPIVQP---------LADCDTVEKKISGEMILGSDCVV 306
           + + +IP+A+VVS    S  LSLP+VQP         L   ++ E ++S E+ L S+  V
Sbjct: 28  ITVDNIPVAAVVSQVPLSETLSLPVVQPLLPPHHAKELRTLNSGESRVSKELELASERTV 87

Query: 305 SPTSVIAFEEGSTE---CELSGECSSS 234
           SPTSVIAF+   ++   CELSGE SSS
Sbjct: 88  SPTSVIAFDHRGSQINVCELSGELSSS 114


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