BLASTX nr result

ID: Coptis21_contig00011151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011151
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]    91   1e-16
ref|NP_001239759.1| uncharacterized protein LOC100782360 precurs...    75   5e-12
emb|CBI33765.3| unnamed protein product [Vitis vinifera]               75   5e-12
ref|NP_001236413.1| uncharacterized protein LOC100526951 precurs...    74   9e-12
ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]
          Length = 231

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/81 (59%), Positives = 52/81 (64%)
 Frame = +1

Query: 148 RVLNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSP 327
           R  NVLK  R      +  F DG  LGAIK SGPSPG    HK  NA TLG IKDSGPSP
Sbjct: 25  RPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSGPSPG--NGHKFTNAGTLGGIKDSGPSP 82

Query: 328 GNGHKFADVEALGGVKVSGPS 390
           GNGHKF +   LGG+K SGP+
Sbjct: 83  GNGHKFTNAGTLGGIKDSGPN 103


>ref|NP_001239759.1| uncharacterized protein LOC100782360 precursor [Glycine max]
           gi|255640582|gb|ACU20576.1| unknown [Glycine max]
          Length = 132

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 148 RVLNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSP 327
           R L++++  +  +   +  F D   LGA+K SGPSPG+   HK  N++TLG IKDSGPS 
Sbjct: 25  RPLSIIETEKSVTGGEVVDFFDWLSLGAMKDSGPSPGV--GHKFTNSETLGGIKDSGPSS 82

Query: 328 GN-GHKFADVEALGGVKVSGPS 390
           G  GH+F + + LGG+K SGPS
Sbjct: 83  GGPGHQFTNSQTLGGIKNSGPS 104



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +1

Query: 154 LNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSPGN 333
           L  +K    SS      F +   LG IK SGPSPG  GH K  N++TLG++KDSGPSPG 
Sbjct: 72  LGGIKDSGPSSGGPGHQFTNSQTLGGIKNSGPSPGGEGH-KFTNSETLGEMKDSGPSPGQ 130

Query: 334 GH 339
           GH
Sbjct: 131 GH 132


>emb|CBI33765.3| unnamed protein product [Vitis vinifera]
          Length = 94

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/68 (58%), Positives = 42/68 (61%)
 Frame = +1

Query: 148 RVLNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSP 327
           R  NVLK  R      +  F DG  LGAIK SGPSPG    HK  NA TLG IKDSGPSP
Sbjct: 25  RPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSGPSPG--NGHKFTNAGTLGGIKDSGPSP 82

Query: 328 GNGHKFAD 351
           G GHK+ D
Sbjct: 83  GEGHKYVD 90


>ref|NP_001236413.1| uncharacterized protein LOC100526951 precursor [Glycine max]
           gi|255631234|gb|ACU15984.1| unknown [Glycine max]
          Length = 135

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 148 RVLNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSP 327
           R L++++  + ++      F D   LGA+K SGPSPG+   HK  N++TLG IKDSGPSP
Sbjct: 28  RPLSIIETGKSATGGEEVDFFDWLALGAMKDSGPSPGV--GHKFTNSETLGGIKDSGPSP 85

Query: 328 -GNGHKFADVEALGGVKVSGPS 390
            G GH+F + E LGG+K SG S
Sbjct: 86  GGKGHQFTNSETLGGIKNSGLS 107



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/74 (43%), Positives = 36/74 (48%), Gaps = 22/74 (29%)
 Frame = +1

Query: 184 SANVIESFVDGFPLGAIKTSGPSPGIIGH----------------------HKSINAQTL 297
           S  V   F +   LG IK SGPSPG  GH                      HK  N++TL
Sbjct: 62  SPGVGHKFTNSETLGGIKDSGPSPGGKGHQFTNSETLGGIKNSGLSVGGEGHKFTNSETL 121

Query: 298 GDIKDSGPSPGNGH 339
           G+IKDSGPSPG GH
Sbjct: 122 GEIKDSGPSPGQGH 135


>ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|222853838|gb|EEE91385.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/81 (46%), Positives = 47/81 (58%)
 Frame = +1

Query: 148 RVLNVLKPFRVSSANVIESFVDGFPLGAIKTSGPSPGIIGHHKSINAQTLGDIKDSGPSP 327
           R  N++K    +++   ESF DG  LG IK  GPSPG    H+  N+ TLG IK+ GPSP
Sbjct: 29  RPFNIMKSGNSAASRGTESFFDGLSLGGIK-EGPSPG--AGHEFTNSGTLGGIKEEGPSP 85

Query: 328 GNGHKFADVEALGGVKVSGPS 390
             GH F     LGG+K  GPS
Sbjct: 86  SAGHGFTSSGTLGGIK-EGPS 105


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