BLASTX nr result

ID: Coptis21_contig00011148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011148
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37639.3| unnamed protein product [Vitis vinifera]              337   2e-90
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   329   5e-88
ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago t...   325   1e-86
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   320   4e-85
ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213...   316   4e-84

>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  337 bits (864), Expect = 2e-90
 Identities = 168/228 (73%), Positives = 196/228 (85%)
 Frame = -2

Query: 910  PVVAGMTLAVIDQHAADERIRLEELRRKVLSGEGKSVSYLESEQDLVLPEAGFQLLQNYS 731
            PVVA  TLA+IDQHAADERIRLEELR+KVLSGE K+++YL++EQ+LVLPE G+QLL  Y+
Sbjct: 1003 PVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVLPEIGYQLLHTYA 1062

Query: 730  EQIQKWGWICNVHAQGSGSFTKNLNLLNRRTSVATLLAVPCILGVNLSNNDLLEFLDQLA 551
            EQIQ WGWICN+HAQ S SFTKNL+LL+++ +V TLLAVPCILGVNLS+ DLLEFL QLA
Sbjct: 1063 EQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQLA 1122

Query: 550  ETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEELKQTSLCFQCAHGRPTTV 371
            +TDGSST+PPSV+RVLN KACR AIMFGDALLPSECSLI+EELK+TSLCFQCAHGRPTTV
Sbjct: 1123 DTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTV 1182

Query: 370  PIVNLEALRKQIDNLNTWNVCSRQPWHGLVQHRPSLERARQRLIAAGG 227
            P+VNLEAL KQI  L +    S + WHGL +H  SLERA  RL ++ G
Sbjct: 1183 PLVNLEALHKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRLNSSMG 1230


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  329 bits (844), Expect = 5e-88
 Identities = 168/237 (70%), Positives = 196/237 (82%), Gaps = 9/237 (3%)
 Frame = -2

Query: 910  PVVAGMTLAVIDQHAADERIRLEELRRKVLSGEGKSVSYLESEQDLV---------LPEA 758
            PVVA  TLA+IDQHAADERIRLEELR+KVLSGE K+++YL++EQ+LV         LPE 
Sbjct: 982  PVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVCLCFMLFEVLPEI 1041

Query: 757  GFQLLQNYSEQIQKWGWICNVHAQGSGSFTKNLNLLNRRTSVATLLAVPCILGVNLSNND 578
            G+QLL  Y+EQIQ WGWICN+HAQ S SFTKNL+LL+++ +V TLLAVPCILGVNLS+ D
Sbjct: 1042 GYQLLHTYAEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVD 1101

Query: 577  LLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEELKQTSLCFQ 398
            LLEFL QLA+TDGSST+PPSV+RVLN KACR AIMFGDALLPSECSLI+EELK+TSLCFQ
Sbjct: 1102 LLEFLQQLADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQ 1161

Query: 397  CAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVQHRPSLERARQRLIAAGG 227
            CAHGRPTTVP+VNLEAL KQI  L +    S + WHGL +H  SLERA  RL ++ G
Sbjct: 1162 CAHGRPTTVPLVNLEALHKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRLNSSMG 1218


>ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
            gi|355513703|gb|AES95326.1| MutL DNA mismatch repair
            protein [Medicago truncatula]
          Length = 1293

 Score =  325 bits (832), Expect = 1e-86
 Identities = 159/236 (67%), Positives = 191/236 (80%), Gaps = 10/236 (4%)
 Frame = -2

Query: 910  PVVAGMTLAVIDQHAADERIRLEELRRKVLSGEGKSVSYLESEQDLVLPEAGFQLLQNYS 731
            P++AG TLAVIDQHA DERIRLE+LR+KVLSGE K+++YL++EQ+LVLPE G+QLL +Y 
Sbjct: 1056 PIMAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYR 1115

Query: 730  EQIQKWGWICNVHAQGSGSFTK----------NLNLLNRRTSVATLLAVPCILGVNLSNN 581
            EQI+ WGWICN+H Q S SF +          NL+LLNR+     L+AVPCILGVNL++ 
Sbjct: 1116 EQIKDWGWICNIHTQNSESFRRYISQAVLLIRNLDLLNRQQMTIALVAVPCILGVNLNDV 1175

Query: 580  DLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEELKQTSLCF 401
            DLLEFL QLA+TDGSST+PPSVVR+LNSK+CR AIMFGD+LLPSECSL++EELK TSLCF
Sbjct: 1176 DLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCF 1235

Query: 400  QCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVQHRPSLERARQRLIAA 233
            QCAHGRPTTVP+VNLEALR QID L   N  S   WHGL +H  S++RA QRL +A
Sbjct: 1236 QCAHGRPTTVPLVNLEALRNQIDKLGLMNKSSSNKWHGLQRHEVSIDRAVQRLSSA 1291


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  320 bits (819), Expect = 4e-85
 Identities = 163/245 (66%), Positives = 190/245 (77%), Gaps = 17/245 (6%)
 Frame = -2

Query: 910  PVVAGMTLAVIDQHAADERIRLEELRRKVLSGEGKSVSYLESEQDLV------------- 770
            PVVAG TLAVIDQHAADERIRLEELR+KVLSGE K+++YL++EQ+LV             
Sbjct: 963  PVVAGRTLAVIDQHAADERIRLEELRQKVLSGEEKAITYLDAEQELVCIYESENLICMIM 1022

Query: 769  ----LPEAGFQLLQNYSEQIQKWGWICNVHAQGSGSFTKNLNLLNRRTSVATLLAVPCIL 602
                LPE G+QLL +YSEQI+ WGWICN+HAQ S SF ++L++LNR     TL+AVPCIL
Sbjct: 1023 VIQVLPEIGYQLLHSYSEQIKDWGWICNIHAQNSESFRRSLDILNRPQMAVTLIAVPCIL 1082

Query: 601  GVNLSNNDLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEEL 422
            GV L++ DLLEFL QLA+TDGSST+PPSV+RVLN KACR AIMFGD+LLPSECSLI+EEL
Sbjct: 1083 GVKLNDVDLLEFLQQLADTDGSSTIPPSVLRVLNLKACRGAIMFGDSLLPSECSLIVEEL 1142

Query: 421  KQTSLCFQCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVQHRPSLERARQRL 242
            K TSLCFQCAHGRPTTVP+VNLEAL  QI  L   N  S   WHGL +H+  +ERA QRL
Sbjct: 1143 KHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNERSSDEWHGLHRHKVCIERAAQRL 1202

Query: 241  IAAGG 227
              A G
Sbjct: 1203 NFARG 1207


>ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213777 [Cucumis sativus]
          Length = 1238

 Score =  316 bits (810), Expect = 4e-84
 Identities = 156/229 (68%), Positives = 191/229 (83%), Gaps = 1/229 (0%)
 Frame = -2

Query: 910  PVVAGMTLAVIDQHAADERIRLEELRRKVLSGEGKSVSYLESEQDLVLPEAGFQLLQNYS 731
            PVV+G  LAVIDQHAADERIRLE+LR+K+LSGE K+ +YL++E +LVLPE G+QLL NY+
Sbjct: 1009 PVVSGGILAVIDQHAADERIRLEDLRQKLLSGEAKTTAYLDAEHELVLPEIGYQLLYNYA 1068

Query: 730  EQIQKWGWICNVHAQGSGSFTKNLNLLNRRTSVATLLAVPCILGVNLSNNDLLEFLDQLA 551
            +Q+++WGWICN+HAQ S SF  NLN+L+++ +V  L+AVPCILGVNLS+ DLLEFL QLA
Sbjct: 1069 DQVKEWGWICNIHAQDSKSFRSNLNILHKQETVIMLMAVPCILGVNLSDVDLLEFLHQLA 1128

Query: 550  ETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEELKQTSLCFQCAHGRPTTV 371
            +TDGS+T+PPSV+RVLNSKACR AIMFGD+LLPSECSL++EELKQTSLCFQCAHGRPTTV
Sbjct: 1129 DTDGSATMPPSVLRVLNSKACRGAIMFGDSLLPSECSLLVEELKQTSLCFQCAHGRPTTV 1188

Query: 370  PIVNLEALRKQIDNLNTWNVC-SRQPWHGLVQHRPSLERARQRLIAAGG 227
            P+VNLEAL KQI  L       S   W+GL +   S+ER  QRL +A G
Sbjct: 1189 PLVNLEALHKQIKELEIHGRSGSNGTWNGLGRQELSIERMLQRLSSAEG 1237


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