BLASTX nr result
ID: Coptis21_contig00011127
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011127 (1991 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19050.3| unnamed protein product [Vitis vinifera] 512 e-142 ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|2... 508 e-141 gb|AAG51632.1|AC012193_14 putative 3'-5' exoribonuclease, 3' par... 456 e-126 ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc... 446 e-122 ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit... 436 e-119 >emb|CBI19050.3| unnamed protein product [Vitis vinifera] Length = 1007 Score = 512 bits (1318), Expect = e-142 Identities = 292/560 (52%), Positives = 358/560 (63%), Gaps = 39/560 (6%) Frame = +1 Query: 427 VASTSLPPMHIHQPPI----------------------LRSCPHPNGSLNHLDAHT---- 528 VA TSLP MH+++ + +SCP P + + T Sbjct: 92 VAFTSLPTMHLNEQALHAEVGSMNNQHIFPSDPSGGMCSKSCPVPIDCEQSIQSFTNKNV 151 Query: 529 ----------PRIHFEPHWSPHLVNAAMQNADVFVAAFRVNAHNRLEAYCTIDGLPIDVL 678 R +F PHWS +VN A++ +VF A+FRVNA+NRLEAYCTI+G+ DVL Sbjct: 152 LSPYQDEGCAQRKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVL 211 Query: 679 ISGGAAQNRAVEGDVVAVQLDSLSLWTRLKGSAGHTKNCTPLDGLVLLKEVEGVGDNCKL 858 ISG A+QNRAVEGD+VAV++D SLW+R+KGS N E +G N + Sbjct: 212 ISGLASQNRAVEGDIVAVKVDPFSLWSRMKGSTVFPNNAAENISQ------EPMGHN-HV 264 Query: 859 KEKVDDCXXXXXXXXXXXXXXXXXXXXXCALVSTFPSKRPTGRVVAIIQKSPRRDALVGF 1038 CA +++FPSKRPTG VVAII++SPRR A+VGF Sbjct: 265 NGHHPPVFGPSHVSCFGERSNMDSLEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGF 324 Query: 1039 LGVSQWRPSGGEGFQKETNQNKTFVSYSNQEFIELIPNDAKFPKMLVCLRDLPEYIKKRL 1218 L V QW S +K T NKT++S S+ E+I+L P D KFPKM+V ++ L + IKKRL Sbjct: 325 LSVKQWL-SSRVLHRKGTKMNKTYLSLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRL 383 Query: 1219 MKSDA---MELVAVRIENWREDSLLPHACVMHSFGRGGEIEPHLAAILFENSICVTEFSP 1389 DA MELVA +I +W E+S LP A VMH FGRGGEIEP +AAILFEN+I +EFSP Sbjct: 384 EDGDASMEMELVAAQISDWGEESSLPLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSP 443 Query: 1390 ESLSNLPKFPWEVPAEELERRKDLRHLCTLTIDPSTATDLDDALSVQRVSDSIFRIGVHI 1569 ESLS LP PW+VP EE+ERR+DLR+LC TIDPSTATDLDDALSV+++S FR+GVHI Sbjct: 444 ESLSCLPHIPWKVPQEEIERRRDLRNLCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHI 503 Query: 1570 ADVSYFVLPDTPLDIEAQTRSTSVYLRHRKIPMLPALLSENIGSLVPGVDRLAYSIMFDC 1749 AD SYFVLPD LD EAQ+RSTSVYL K+PMLP LLSEN+GSL+PGVDRLA+SI +D Sbjct: 504 ADASYFVLPDGVLDREAQSRSTSVYLLQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDI 563 Query: 1750 NLAGDVVDRWIGRTVIRSCCKLSYQHAQYIIDGLMDVERHDTVVSQFPEVYGQFGKVDVI 1929 NLAGDVVDRWIGRTVI+SCCKLSY+HAQ IIDG+ DVE VI Sbjct: 564 NLAGDVVDRWIGRTVIQSCCKLSYEHAQGIIDGMFDVE--------------------VI 603 Query: 1930 GSVKILTEISKRLKENRYRD 1989 S+K L ISK L+ NR+ D Sbjct: 604 RSIKYLYAISKTLRANRFND 623 >ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|222843977|gb|EEE81524.1| predicted protein [Populus trichocarpa] Length = 860 Score = 508 bits (1307), Expect = e-141 Identities = 282/568 (49%), Positives = 363/568 (63%), Gaps = 49/568 (8%) Frame = +1 Query: 427 VASTSLPPMHIHQPP------------ILRSCPHP------NGSL---NHLDAHTPRIHF 543 +A +S+P MH+++ + +SC P +G L + + F Sbjct: 3 IAYSSMPTMHVNEQQEDLVLSDLDGSMLAKSCTEPIVGGGPHGKLLPFHQFEGQAQSKIF 62 Query: 544 EPHWSPHLVNAAMQNADVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDV 723 P+WS VN A++ DVF FRVNAHNRLEAYC I+G+P DVLISG AAQNRA++GDV Sbjct: 63 APYWSTETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDVLISGIAAQNRAMDGDV 122 Query: 724 VAVQLDSLSLWTRLKGSAGHTKNCTPLDG----------------LVLLKEV-------- 831 V +++D LS WT++KGS + N T D LV K + Sbjct: 123 VVIEVDPLSFWTKMKGSNVPSNNPTAEDSNLHLEANGKCADFGNSLVPQKGIHYDETACA 182 Query: 832 -EGVGDNCKLKEKVDDCXXXXXXXXXXXXXXXXXXXXXCALVSTFPSKRPTGRVVAIIQK 1008 E V DN CA++S +PSKRPTGRVVAI++K Sbjct: 183 GEVVHDNYVNGYHQSASESSLAVPSTGQDEVSNSVGRICAMLSLYPSKRPTGRVVAIVEK 242 Query: 1009 SPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVSYSNQEFIELIPNDAKFPKMLVCLR 1188 SPRRD +VGFL V QW EG ++ +NK+ +S SN+E+IE++P D +FPK++V + Sbjct: 243 SPRRDVIVGFLNVKQWFYYR-EGCRQNAKKNKSSLSISNREYIEMMPTDPRFPKLMVLVS 301 Query: 1189 DLPEYIKKRLMKSDA---MELVAVRIENWREDSLLPHACVMHSFGRGGEIEPHLAAILFE 1359 LP+ IKKRL DA MELVA +I+NW + S P A V FGRG E+E + AIL E Sbjct: 302 VLPDCIKKRLENEDATVEMELVAAQIDNWSDKSPFPEAHVSCIFGRGSEMESQINAILHE 361 Query: 1360 NSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRHLCTLTIDPSTATDLDDALSVQRVS 1539 N+IC ++FSPESLS LP WEVP +E+E RKD+R+LC TIDPS+ATDLDDALSVQ++ Sbjct: 362 NAICCSKFSPESLSCLPSNTWEVPKDEIENRKDIRNLCIFTIDPSSATDLDDALSVQKLP 421 Query: 1540 DSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYLRHRKIPMLPALLSENIGSLVPGVD 1719 + + R+GVHIADVSYFVLPDT LD+EAQ RSTSVY+ RKIPMLP LLSEN+GSL PGVD Sbjct: 422 NGLVRVGVHIADVSYFVLPDTALDMEAQFRSTSVYMLRRKIPMLPPLLSENLGSLNPGVD 481 Query: 1720 RLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQHAQYIIDGLMDVERHDTVVSQFPEV 1899 RLA+SI +D N +G+VVDRWI RTVI+SCCKLSY+HAQ I+DG++D E +T P++ Sbjct: 482 RLAFSIFWDFNSSGNVVDRWIDRTVIQSCCKLSYEHAQGIVDGMIDTETCNTFGDSLPQL 541 Query: 1900 YGQFGKVDVIGSVKILTEISKRLKENRY 1983 +G F DVIGSV L EISK L+E R+ Sbjct: 542 HGHFEWADVIGSVVCLHEISKTLREKRF 569 >gb|AAG51632.1|AC012193_14 putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis thaliana] Length = 935 Score = 456 bits (1174), Expect = e-126 Identities = 266/590 (45%), Positives = 350/590 (59%), Gaps = 61/590 (10%) Frame = +1 Query: 403 DATASSNLVASTSLPPMHIHQ-------PPIL-----------RSCPHP---------NG 501 +A +SN VA S+PPM P+L +SCP P NG Sbjct: 75 EAMRASN-VAFNSMPPMRAESGYPRRSASPLLSSPEVSKQLLSKSCPDPRACEQSPGMNG 133 Query: 502 SL-NHLDAHTPRIHFEPHWSPHLVNAAMQNADVFVAAFRVNAHNRLEAYCTIDGLPIDVL 678 L ++ + R F HWS V A++ + F A FRVNAHNR EAYC IDG+P D+L Sbjct: 134 ELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDIL 193 Query: 679 ISGGAAQNRAVEGDVVAVQLDSLSLWTRLKGSAGHT---------------KNCTPLDGL 813 I+G Q+RAVEGD V ++LD LSLW ++KG + K +G+ Sbjct: 194 INGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPPEKDDKKARQKNGI 253 Query: 814 VLLKEVEG---------VGDNCK------LKEKVDDCXXXXXXXXXXXXXXXXXXXXXCA 948 +++ E +G K +D C C Sbjct: 254 DVVEGFEDGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNCSAVDKL----CG 309 Query: 949 LVSTFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVSYSNQ 1128 ++S+FP KRPTG+VVA+++KS RD++VG L V W + + + K+ +S S+ Sbjct: 310 ILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYK----ESDPKRCKSPLSLSDD 365 Query: 1129 EFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDA---MELVAVRIENWREDSLLPHACV 1299 E+++L+P D +FPK++V LP I+ RL D ELVA +I +W E S P A + Sbjct: 366 EYVQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQI 425 Query: 1300 MHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRHLCTL 1479 H FGRG E+EP + AIL++NS+C ++FSP SL++LP+ PWEVP EE++RRKDLR LC L Sbjct: 426 THLFGRGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVL 485 Query: 1480 TIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYLRHRK 1659 TIDPSTATDLDDALSVQ + FR+GVHIADVSYFVLP+T LD EA+ RSTSVYL RK Sbjct: 486 TIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRK 545 Query: 1660 IPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQHAQYI 1839 I MLP LLSEN+GSL PG DRLA+SI++D N GDV+DRWIGRT+IRSCCKLSY HAQ I Sbjct: 546 ISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDI 605 Query: 1840 IDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRD 1989 IDG DV + +P ++G F DV SVK L+EIS L++ R+R+ Sbjct: 606 IDGKSDVAENG-----WPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRN 650 >ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus] Length = 1125 Score = 446 bits (1147), Expect = e-122 Identities = 273/606 (45%), Positives = 354/606 (58%), Gaps = 85/606 (14%) Frame = +1 Query: 427 VASTSLPPMHIHQPP---------------------ILRSCP-------HPNGSLNH--- 513 + +SLPP+HI++ + +SCP + SLN Sbjct: 95 IGFSSLPPLHINEQAELSASHNLMNQNHHSSDAGGRVTKSCPEQIASGRYSGISLNQHSP 154 Query: 514 ----LDAHTPRIHFEPHWSPHLVNAAMQNADVFVAAFRVNAHNRLEAYCTIDGLPIDVLI 681 D +T R +F HWS VN +Q +F A FRVNAHNRLEAYC IDGLPIDVLI Sbjct: 155 PADVTDNNTQRKYFPSHWSVDDVNEGLQKGGIFKALFRVNAHNRLEAYCKIDGLPIDVLI 214 Query: 682 SGGAAQNRAVEGDVVAVQLDSLSLWTRLKGSAGHTKNCTPLDGLVLLKEVEGVGD-NCKL 858 +G A+QNRAVEGD+VA++LD + WT++KG++ N ++ L E+ D NCK Sbjct: 215 NGIASQNRAVEGDIVAIKLDPFTSWTKMKGTSEAHNNMHSMEDANLPAELTEKNDHNCKG 274 Query: 859 KEKVD----------------DCXXXXXXXXXXXXXXXXXXXXXC---ALVSTFPSK--- 972 K KVD C C L PS+ Sbjct: 275 KNKVDADVKSDSFRSTSLPDKRCCSEDKVLDGVACDVLLSNYEQCDINELSVVNPSQAHH 334 Query: 973 --------RPTGRVVAII----------------QKSPRRDALVGFLGVSQWRPSGGEGF 1080 + GR+ A+I +KS R+ +VG L V ++ S E + Sbjct: 335 SSNQDDVSKAIGRICALINLYPAKRPTGRVVTILEKSRLRENVVGHLNVKKFL-SFQEFY 393 Query: 1081 QKETNQNKTFVSYSNQEFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDAM---ELVAV 1251 KE+ ++ S N +++L+PNDA+FP M+V DLP IKKRL D ELVA Sbjct: 394 VKESTKSCLSPS-QNCGYVQLMPNDARFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAA 452 Query: 1252 RIENWREDSLLPHACVMHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVP 1431 RI W ++S P A V+H GRG E+E H+ AILFEN+I EFS +SLS +P+ PW++P Sbjct: 453 RIYEWVKESSSPRAHVLHVLGRGNEVESHIDAILFENAIRTCEFSQDSLSCVPQTPWKIP 512 Query: 1432 AEELERRKDLRHLCTLTIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLD 1611 EEL+ R+D+R+LC TIDPS+A+DLDDALSVQR+++ IFR+G+HIADVSYFVLPDT LD Sbjct: 513 PEELQCRRDIRNLCIFTIDPSSASDLDDALSVQRLANGIFRVGIHIADVSYFVLPDTALD 572 Query: 1612 IEAQTRSTSVYLRHRKIPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRT 1791 EAQ RSTSVYL RKIPMLP LLSE+IGSL PGVDRLA+S+ D N GDV D WI RT Sbjct: 573 KEAQIRSTSVYLLQRKIPMLPPLLSESIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERT 632 Query: 1792 VIRSCCKLSYQHAQYIIDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLK 1971 VI CCKLSY+HAQ IIDGL+D + + + P+++GQF DVI SVK+L EISK +K Sbjct: 633 VICCCCKLSYEHAQDIIDGLIDSDSSELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVK 692 Query: 1972 ENRYRD 1989 E R+R+ Sbjct: 693 EKRFRN 698 >ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera] Length = 1131 Score = 436 bits (1121), Expect = e-119 Identities = 225/352 (63%), Positives = 273/352 (77%), Gaps = 3/352 (0%) Frame = +1 Query: 943 CALVSTFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVSYS 1122 CA +++FPSKRPTG VVAII++SPRR A+VGFL V QW S +K T NKT++S S Sbjct: 346 CAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLSVKQWL-SSRVLHRKGTKMNKTYLSLS 404 Query: 1123 NQEFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDA---MELVAVRIENWREDSLLPHA 1293 + E+I+L P D KFPKM+V ++ L + IKKRL DA MELVA +I +W E+S LP A Sbjct: 405 DSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSLPLA 464 Query: 1294 CVMHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRHLC 1473 VMH FGRGGEIEP +AAILFEN+I +EFSPESLS LP PW+VP EE+ERR+DLR+LC Sbjct: 465 HVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLRNLC 524 Query: 1474 TLTIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYLRH 1653 TIDPSTATDLDDALSV+++S FR+GVHIAD SYFVLPD LD EAQ+RSTSVYL Sbjct: 525 IFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYLLQ 584 Query: 1654 RKIPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQHAQ 1833 K+PMLP LLSEN+GSL+PGVDRLA+SI +D NLAGDVVDRWIGRTVI+SCCKLSY+HAQ Sbjct: 585 HKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEHAQ 644 Query: 1834 YIIDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRD 1989 IIDG+ DVE + + P+++G F +VI S+K L ISK L+ NR+ D Sbjct: 645 GIIDGMFDVEGSKILGNDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFND 696 Score = 130 bits (326), Expect = 2e-27 Identities = 78/185 (42%), Positives = 103/185 (55%), Gaps = 36/185 (19%) Frame = +1 Query: 427 VASTSLPPMHIHQPPI----------------------LRSCPHPNGSLNHLDAHT---- 528 VA TSLP MH+++ + +SCP P + + T Sbjct: 92 VAFTSLPTMHLNEQALHAEVGSMNNQHIFPSDPSGGMCSKSCPVPIDCEQSIQSFTNKNV 151 Query: 529 ----------PRIHFEPHWSPHLVNAAMQNADVFVAAFRVNAHNRLEAYCTIDGLPIDVL 678 R +F PHWS +VN A++ +VF A+FRVNA+NRLEAYCTI+G+ DVL Sbjct: 152 LSPYQDEGCAQRKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVL 211 Query: 679 ISGGAAQNRAVEGDVVAVQLDSLSLWTRLKGSAGHTKNCTPLDGLVLLKEVEGVGDNCKL 858 ISG A+QNRAVEGD+VAV++D SLW+R+KGS N + LL +V VGD+ K Sbjct: 212 ISGLASQNRAVEGDIVAVKVDPFSLWSRMKGSTVFPNNAGLTEDHNLLSDVTFVGDSWKG 271 Query: 859 KEKVD 873 K KVD Sbjct: 272 KGKVD 276