BLASTX nr result

ID: Coptis21_contig00011125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011125
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634879.1| PREDICTED: myrcene synthase, chloroplastic-l...   117   2e-24
emb|CBI40592.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...   117   2e-24
emb|CBI40170.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [...   115   4e-24

>ref|XP_003634879.1| PREDICTED: myrcene synthase, chloroplastic-like, partial [Vitis
           vinifera]
          Length = 321

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/112 (51%), Positives = 80/112 (71%)
 Frame = +3

Query: 60  SSSSPISNDLLHVI*NELARGDVPKAIQCYMHDTGVSFQVAREQLRHLANEAWKKQNREQ 239
           S  S +S+DL   + +EL RGDVPK+IQCYM++TG S + AR+ + +L    WKK N + 
Sbjct: 208 SMISRLSDDLGTSL-DELKRGDVPKSIQCYMYETGASEEDARKHISYLIEGTWKKLNEDG 266

Query: 240 WVESPLPEAFVKAVTNGARTAEIFYQYGDGFGIPDNETENRIRSLLVDPIPL 395
            VESPLPE F++  TN AR A+  YQ+GDG GI D ET++R+ SLL++PIP+
Sbjct: 267 AVESPLPETFIRIATNFARMAQCMYQHGDGHGIEDGETKDRVLSLLIEPIPV 318


>emb|CBI40592.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/112 (51%), Positives = 80/112 (71%)
 Frame = +3

Query: 60  SSSSPISNDLLHVI*NELARGDVPKAIQCYMHDTGVSFQVAREQLRHLANEAWKKQNREQ 239
           S  S +S+DL   + +EL RGDVPK+IQCYM++TG S + AR+ + +L    WKK N + 
Sbjct: 382 SMISRLSDDLGTSL-DELKRGDVPKSIQCYMYETGASEEDARKHISYLIEGTWKKLNEDG 440

Query: 240 WVESPLPEAFVKAVTNGARTAEIFYQYGDGFGIPDNETENRIRSLLVDPIPL 395
            VESPLPE F++  TN AR A+  YQ+GDG GI D ET++R+ SLL++PIP+
Sbjct: 441 AVESPLPETFIRIATNFARMAQCMYQHGDGHGIEDGETKDRVLSLLIEPIPV 492


>ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 582

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/111 (51%), Positives = 79/111 (71%)
 Frame = +3

Query: 60  SSSSPISNDLLHVI*NELARGDVPKAIQCYMHDTGVSFQVAREQLRHLANEAWKKQNREQ 239
           S  S +S+DL   + +EL RGDVPK+IQCYMH+TG S + AR+ + +L  + WKK N ++
Sbjct: 468 SMISRLSDDLGTSL-DELKRGDVPKSIQCYMHETGASEEEARKHISYLIGDTWKKLNEDR 526

Query: 240 WVESPLPEAFVKAVTNGARTAEIFYQYGDGFGIPDNETENRIRSLLVDPIP 392
            VESP PE F+   TN AR A+  YQ+GDG+GI   ET++R+ SLLV+P+P
Sbjct: 527 AVESPFPETFIGIATNLARMAQCMYQHGDGYGIEYGETKDRVLSLLVEPVP 577


>emb|CBI40170.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  115 bits (289), Expect = 4e-24
 Identities = 52/97 (53%), Positives = 70/97 (72%)
 Frame = +3

Query: 105 NELARGDVPKAIQCYMHDTGVSFQVAREQLRHLANEAWKKQNREQWVESPLPEAFVKAVT 284
           +EL RGDVPK+IQCYMH+TG S + ARE ++ L  E WKK N ++ +ESP  + F+    
Sbjct: 104 DELKRGDVPKSIQCYMHETGASEEDAREHIKCLIGETWKKMNEDRVMESPFSQTFIGIAI 163

Query: 285 NGARTAEIFYQYGDGFGIPDNETENRIRSLLVDPIPL 395
           N AR A+  YQYGDG G+ D ET++R+ SLL++PIPL
Sbjct: 164 NLARMAQCMYQYGDGHGVQDRETKDRVLSLLIEPIPL 200


>ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [Vitis vinifera]
          Length = 590

 Score =  115 bits (289), Expect = 4e-24
 Identities = 52/97 (53%), Positives = 70/97 (72%)
 Frame = +3

Query: 105 NELARGDVPKAIQCYMHDTGVSFQVAREQLRHLANEAWKKQNREQWVESPLPEAFVKAVT 284
           +EL RGDVPK+IQCYMH+TG S + ARE ++ L  E WKK N ++ +ESP  + F+    
Sbjct: 493 DELKRGDVPKSIQCYMHETGASEEDAREHIKCLIGETWKKMNEDRVMESPFSQTFIGIAI 552

Query: 285 NGARTAEIFYQYGDGFGIPDNETENRIRSLLVDPIPL 395
           N AR A+  YQYGDG G+ D ET++R+ SLL++PIPL
Sbjct: 553 NLARMAQCMYQYGDGHGVQDRETKDRVLSLLIEPIPL 589


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